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PMC:3585731 / 522-649 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T24 110-119 Positive_regulation denotes activated
T23 71-81 Gene_expression denotes production
T22 58-62 Regulation denotes role
T15 66-70 Protein denotes TNFα
R5 T23 T22 themeOf production,role
R2 T15 T23 themeOf TNFα,production

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T243 123-124 DT denotes a
T242 120-122 IN denotes in
T241 110-119 VB denotes activated
T240 107-109 VB denotes is
T239 103-106 NN denotes Akt
T238 101-102 -COMMA- denotes ,
T237 90-101 NN denotes necroptosis
T236 83-89 IN denotes During
T235 71-81 NN denotes production
T234 66-70 NN denotes TNFα
T233 63-65 IN denotes in
T232 58-62 NN denotes role
T231 54-57 JJ denotes key
T230 52-53 DT denotes a
T229 46-51 VB denotes plays
T228 42-45 CC denotes and
T227 36-41 NN denotes cells
T226 31-35 NN denotes L929
T225 28-30 IN denotes in
T224 16-27 NN denotes necroptosis
T223 12-15 IN denotes for
T222 3-11 JJ denotes critical
T221 0-2 VB denotes is
R82 T221 T225 arg1Of is,in
R83 T221 T228 arg1Of is,and
R84 T222 T221 arg2Of critical,is
R85 T222 T223 arg1Of critical,for
R86 T224 T223 arg2Of necroptosis,for
R87 T227 T225 arg2Of cells,in
R88 T227 T226 arg1Of cells,L929
R91 T229 T228 arg2Of plays,and
R92 T229 T233 arg1Of plays,in
R93 T232 T229 arg2Of role,plays
R94 T232 T230 arg1Of role,a
R95 T232 T231 arg1Of role,key
R96 T235 T233 arg2Of production,in
R97 T235 T234 arg1Of production,TNFα
R98 T237 T236 arg2Of necroptosis,During
R99 T239 T240 arg1Of Akt,is
R100 T239 T241 arg2Of Akt,activated
R101 T241 T236 arg1Of activated,During
R102 T241 T238 arg1Of activated,","
R103 T241 T240 arg2Of activated,is
R104 T241 T242 arg1Of activated,in

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T92 66-70 Protein denotes TNFα

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T402 66-70 http://www.uniprot.org/uniprot/P01375 denotes TNFα
T396 103-106 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T389 103-106 http://www.uniprot.org/uniprot/P31751 denotes Akt
T382 103-106 http://www.uniprot.org/uniprot/P31749 denotes Akt

GO-BP

Id Subject Object Predicate Lexical cue
T111 90-101 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T110 16-27 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T103 90-101 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis
T102 16-27 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis

simple1

Id Subject Object Predicate Lexical cue
T147 66-70 Protein denotes TNFα

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T357 66-70 Protein denotes TNFα
T366 58-62 Regulation denotes role
T367 71-81 Gene_expression denotes production
R452 T357 T367 themeOf TNFα,production
R456 T367 T366 themeOf production,role

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T445 66-70 Protein denotes TNFα
T454 71-81 Gene_expression denotes production
R471 T445 T454 themeOf TNFα,production

DLUT931

Id Subject Object Predicate Lexical cue
T424 58-62 Regulation denotes role
T414 66-70 Protein denotes TNFα
T423 71-81 Gene_expression denotes production
R459 T414 T423 themeOf TNFα,production
R463 T423 T424 themeOf production,role

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T764 66-81 Gene_expression denotes TNFα production
T734 66-70 Protein denotes TNFα
T729 103-106 Protein denotes Akt
R431 T734 T764 themeOf TNFα,TNFα production

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T573 83-89 IN denotes During
T572 81-82 . denotes .
T571 71-81 NN denotes production
T570 66-70 JJ denotes TNFα
T569 63-65 IN denotes in
T568 58-62 NN denotes role
T567 54-57 JJ denotes key
T566 52-53 DT denotes a
T565 46-51 VBZ denotes plays
T564 42-45 CC denotes and
T563 36-41 NNS denotes cells
T562 31-35 CD denotes L929
T561 28-30 IN denotes in
T560 16-27 NN denotes necroptosis
T559 12-15 IN denotes for
T558 3-11 JJ denotes critical
T557 0-2 VBZ denotes is
T580 123-124 DT denotes a
T579 120-122 IN denotes in
T578 110-119 VBN denotes activated
T577 107-109 VBZ denotes is
T576 103-106 NNP denotes Akt
T575 101-102 , denotes ,
T574 90-101 NN denotes necroptosis
R298 T558 T557 acomp critical,is
R299 T559 T558 prep for,critical
R300 T560 T559 pobj necroptosis,for
R301 T561 T557 prep in,is
R302 T562 T563 nummod L929,cells
R303 T563 T561 pobj cells,in
R304 T564 T557 cc and,is
R305 T565 T557 conj plays,is
R306 T566 T568 det a,role
R307 T567 T568 amod key,role
R308 T568 T565 dobj role,plays
R309 T569 T568 prep in,role
R310 T570 T571 amod TNFα,production
R311 T571 T569 pobj production,in
R313 T573 T578 prep During,activated
R314 T574 T573 pobj necroptosis,During
R315 T575 T578 punct ",",activated
R316 T576 T578 nsubjpass Akt,activated
R317 T577 T578 auxpass is,activated
R318 T578 T578 ROOT activated,activated
R319 T579 T578 prep in,activated

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T474 110-119 Positive_regulation denotes activated
T472 110-119 Positive_regulation denotes activated
T469 103-106 Protein denotes Akt
T468 71-81 Gene_expression denotes production
T467 66-70 Protein denotes TNFα
R218 T467 T468 themeOf TNFα,production
R219 T469 T472 themeOf Akt,activated

test3

Id Subject Object Predicate Lexical cue
T49 110-119 Positive_regulation denotes activated
T48 71-81 Gene_expression denotes production
T47 66-70 Protein denotes TNFα
T46 58-62 Regulation denotes role
T33 66-70 Protein denotes TNFα
R10 T47 T48 themeOf TNFα,production
R11 T48 T46 themeOf production,role