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PMC:3585731 / 50978-51249 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T25579 223-231 Protein denotes Myr-Akt1
T25578 78-91 Protein denotes Myr-Akt1-FLAG
T25577 11-19 Protein denotes Myr-Akt1

2_test

Id Subject Object Predicate Lexical cue
23469174-21041639-90505486 73-75 21041639 denotes 52

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T25647 262-270 NN denotes strategy
T25646 257-261 JJ denotes same
T25645 253-256 DT denotes the
T25644 247-252 VB denotes using
T25643 237-246 VB denotes generated
T25642 232-236 VB denotes were
T25641 223-231 NN denotes Myr-Akt1
T25640 220-222 IN denotes of
T25639 211-219 NN denotes versions
T25638 204-210 JJ denotes Mutant
T25637 201-202 -RRB- denotes )
T25636 191-201 NN denotes Invitrogen
T25635 190-191 -LRB- denotes (
T25634 183-189 NN denotes vector
T25633 172-182 JJ denotes retroviral
T25632 161-171 NN denotes pMSCV-puro
T25631 158-160 IN denotes of
T25630 152-157 NN denotes sites
T25629 146-151 NN denotes EcoRI
T25628 142-145 CC denotes and
T25627 136-141 NN denotes BglII
T25626 132-135 DT denotes the
T25625 127-131 IN denotes into
T25624 117-126 VB denotes subcloned
T25623 113-116 CC denotes and
T25622 109-112 NN denotes PCR
T25621 106-108 IN denotes by
T25620 96-105 VB denotes amplified
T25619 92-95 VB denotes was
T25618 78-91 NN denotes Myr-Akt1-FLAG
T25617 75-76 -RRB- denotes ]
T25616 73-75 CD denotes 52
T25615 72-73 -LRB- denotes [
T25614 62-71 VB denotes described
T25613 57-61 VB denotes been
T25612 53-56 VB denotes has
T25611 51-52 -COMMA- denotes ,
T25610 48-51 NN denotes tag
T25609 43-47 NN denotes FLAG
T25608 32-42 JJ denotes c-terminal
T25607 21-31 VB denotes containing
T25606 19-20 -COMMA- denotes ,
T25605 11-19 NN denotes Myr-Akt1
T25604 8-10 IN denotes of
T25603 0-7 NN denotes Cloning
R17465 T25603 T25604 arg1Of Cloning,of
R17466 T25603 T25606 arg1Of Cloning,","
R17467 T25603 T25607 arg1Of Cloning,containing
R17468 T25603 T25612 arg1Of Cloning,has
R17469 T25603 T25613 arg1Of Cloning,been
R17470 T25603 T25614 arg2Of Cloning,described
R17471 T25605 T25604 arg2Of Myr-Akt1,of
R17472 T25610 T25607 arg2Of tag,containing
R17473 T25610 T25608 arg1Of tag,c-terminal
R17474 T25610 T25609 arg1Of tag,FLAG
R17475 T25614 T25611 arg1Of described,","
R17476 T25614 T25612 arg2Of described,has
R17477 T25614 T25613 arg2Of described,been
R17478 T25614 T25615 arg1Of described,[
R17479 T25616 T25615 arg2Of 52,[
R17480 T25617 T25615 arg3Of ],[
R17481 T25618 T25619 arg1Of Myr-Akt1-FLAG,was
R17482 T25618 T25620 arg2Of Myr-Akt1-FLAG,amplified
R17483 T25618 T25624 arg2Of Myr-Akt1-FLAG,subcloned
R17484 T25620 T25623 arg1Of amplified,and
R17485 T25622 T25620 arg1Of PCR,amplified
R17486 T25622 T25621 arg2Of PCR,by
R17487 T25623 T25619 arg2Of and,was
R17488 T25624 T25623 arg2Of subcloned,and
R17489 T25624 T25625 arg1Of subcloned,into
R17490 T25627 T25628 arg1Of BglII,and
R17491 T25629 T25628 arg2Of EcoRI,and
R17492 T25630 T25625 arg2Of sites,into
R17493 T25630 T25626 arg1Of sites,the
R17494 T25630 T25627 arg1Of sites,BglII
R17495 T25630 T25629 arg1Of sites,EcoRI
R17496 T25630 T25631 arg1Of sites,of
R17497 T25634 T25631 arg2Of vector,of
R17498 T25634 T25632 arg1Of vector,pMSCV-puro
R17499 T25634 T25633 arg1Of vector,retroviral
R17500 T25634 T25635 arg1Of vector,(
R17501 T25636 T25635 arg2Of Invitrogen,(
R17502 T25637 T25635 arg3Of ),(
R17503 T25639 T25638 arg1Of versions,Mutant
R17504 T25639 T25640 arg1Of versions,of
R17505 T25639 T25642 arg1Of versions,were
R17506 T25639 T25643 arg2Of versions,generated
R17507 T25641 T25640 arg2Of Myr-Akt1,of
R17508 T25643 T25642 arg2Of generated,were
R17509 T25644 T25643 arg3Of using,generated
R17510 T25647 T25644 arg2Of strategy,using
R17511 T25647 T25645 arg1Of strategy,the
R17512 T25647 T25646 arg1Of strategy,same

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T25594 78-91 Protein denotes Myr-Akt1-FLAG
T25593 11-19 Protein denotes Myr-Akt1
T25595 223-231 Protein denotes Myr-Akt1

sentences

Id Subject Object Predicate Lexical cue
T25589 204-271 Sentence denotes Mutant versions of Myr-Akt1 were generated using the same strategy.
T25588 78-203 Sentence denotes Myr-Akt1-FLAG was amplified by PCR and subcloned into the BglII and EcoRI sites of pMSCV-puro retroviral vector (Invitrogen).
T25587 0-77 Sentence denotes Cloning of Myr-Akt1, containing c-terminal FLAG tag, has been described [52].
T317 0-77 Sentence denotes Cloning of Myr-Akt1, containing c-terminal FLAG tag, has been described [52].
T318 78-203 Sentence denotes Myr-Akt1-FLAG was amplified by PCR and subcloned into the BglII and EcoRI sites of pMSCV-puro retroviral vector (Invitrogen).
T319 204-271 Sentence denotes Mutant versions of Myr-Akt1 were generated using the same strategy.

simple1

Id Subject Object Predicate Lexical cue
T25601 223-231 Protein denotes Myr-Akt1
T25600 78-91 Protein denotes Myr-Akt1-FLAG
T25599 11-19 Protein denotes Myr-Akt1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T25650 223-231 Protein denotes Myr-Akt1
T25649 78-91 Protein denotes Myr-Akt1-FLAG
T25648 11-19 Protein denotes Myr-Akt1

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T25659 223-231 Protein denotes Myr-Akt1
T25658 78-91 Protein denotes Myr-Akt1-FLAG
T25657 11-19 Protein denotes Myr-Akt1

DLUT931

Id Subject Object Predicate Lexical cue
T25653 223-231 Protein denotes Myr-Akt1
T25652 78-91 Protein denotes Myr-Akt1-FLAG
T25651 11-19 Protein denotes Myr-Akt1

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T25670 146-151 Entity denotes EcoRI
T25669 136-141 Entity denotes BglII
T25668 78-91 Protein denotes Myr-Akt1-FLAG
T25667 106-112 Protein denotes by PCR
T25666 15-19 Protein denotes Akt1
T25664 220-231 Protein denotes of Myr-Akt1
T25663 43-76 Protein denotes FLAG tag, has been described [52]
T25662 11-14 Entity denotes Myr
T25661 8-42 Entity denotes of Myr-Akt1, containing c-terminal
T25660 8-42 Entity denotes of Myr-Akt1, containing c-terminal

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T25719 270-271 . denotes .
T25718 262-270 NN denotes strategy
T25717 257-261 JJ denotes same
T25716 253-256 DT denotes the
T25715 247-252 VBG denotes using
T25714 237-246 VBN denotes generated
T25713 232-236 VBD denotes were
T25712 223-231 NN denotes Myr-Akt1
T25711 220-222 IN denotes of
T25710 211-219 NNS denotes versions
T25709 204-210 JJ denotes Mutant
T25708 202-203 . denotes .
T25707 201-202 -RRB- denotes )
T25706 191-201 NNP denotes Invitrogen
T25705 190-191 -LRB- denotes (
T25704 183-189 NN denotes vector
T25703 172-182 NN denotes retroviral
T25702 161-171 NN denotes pMSCV-puro
T25701 158-160 IN denotes of
T25700 152-157 NNS denotes sites
T25699 146-151 NNP denotes EcoRI
T25698 142-145 CC denotes and
T25697 136-141 NNP denotes BglII
T25696 132-135 DT denotes the
T25695 127-131 IN denotes into
T25694 117-126 VBN denotes subcloned
T25693 113-116 CC denotes and
T25692 109-112 NNP denotes PCR
T25691 106-108 IN denotes by
T25690 96-105 VBN denotes amplified
T25689 92-95 VBD denotes was
T25688 78-91 NN denotes Myr-Akt1-FLAG
T25687 76-77 . denotes .
T25686 75-76 NNP denotes ]
T25685 73-75 CD denotes 52
T25684 72-73 NNP denotes [
T25683 62-71 VBN denotes described
T25682 57-61 VBN denotes been
T25681 53-56 VBZ denotes has
T25680 51-52 , denotes ,
T25679 48-51 NN denotes tag
T25678 43-47 NNP denotes FLAG
T25677 32-42 JJ denotes c-terminal
T25676 21-31 VBG denotes containing
T25675 19-20 , denotes ,
T25674 11-19 NNP denotes Myr-Akt1
T25673 8-10 IN denotes of
T25672 0-7 NNP denotes Cloning
R17533 T25691 T25690 agent by,amplified
R17534 T25692 T25691 pobj PCR,by
R17535 T25693 T25690 cc and,amplified
R17536 T25694 T25690 conj subcloned,amplified
R17537 T25695 T25694 prep into,subcloned
R17538 T25696 T25697 det the,BglII
R17539 T25697 T25700 nmod BglII,sites
R17540 T25698 T25697 cc and,BglII
R17541 T25699 T25697 conj EcoRI,BglII
R17542 T25700 T25695 pobj sites,into
R17543 T25701 T25700 prep of,sites
R17544 T25702 T25704 compound pMSCV-puro,vector
R17545 T25703 T25704 compound retroviral,vector
R17546 T25704 T25701 pobj vector,of
R17547 T25705 T25704 punct (,vector
R17548 T25706 T25704 appos Invitrogen,vector
R17549 T25707 T25704 punct ),vector
R17550 T25708 T25690 punct .,amplified
R17551 T25709 T25710 amod Mutant,versions
R17552 T25710 T25714 nsubjpass versions,generated
R17553 T25711 T25710 prep of,versions
R17554 T25712 T25711 pobj Myr-Akt1,of
R17555 T25713 T25714 auxpass were,generated
R17556 T25714 T25714 ROOT generated,generated
R17557 T25715 T25714 advcl using,generated
R17558 T25716 T25718 det the,strategy
R17559 T25717 T25718 amod same,strategy
R17560 T25718 T25715 dobj strategy,using
R17561 T25719 T25714 punct .,generated
R17521 T25679 T25676 dobj tag,containing
R17522 T25680 T25683 punct ",",described
R17523 T25681 T25683 aux has,described
R17524 T25682 T25683 auxpass been,described
R17525 T25683 T25683 ROOT described,described
R17526 T25684 T25683 dobj [,described
R17527 T25685 T25686 nummod 52,]
R17528 T25686 T25684 appos ],[
R17529 T25687 T25683 punct .,described
R17514 T25672 T25683 nsubj Cloning,described
R17515 T25673 T25672 prep of,Cloning
R17516 T25674 T25673 pobj Myr-Akt1,of
R17517 T25675 T25683 punct ",",described
R17518 T25676 T25683 advcl containing,described
R17519 T25677 T25679 amod c-terminal,tag
R17520 T25678 T25679 compound FLAG,tag
R17530 T25688 T25690 nsubjpass Myr-Akt1-FLAG,amplified
R17531 T25689 T25690 auxpass was,amplified
R17532 T25690 T25690 ROOT amplified,amplified

test3

Id Subject Object Predicate Lexical cue
T25585 223-231 Protein denotes Myr-Akt1
T25584 78-91 Protein denotes Myr-Akt1-FLAG
T25583 11-19 Protein denotes Myr-Akt1
T25582 223-231 Protein denotes Myr-Akt1
T25581 78-91 Protein denotes Myr-Akt1-FLAG
T25580 11-19 Protein denotes Myr-Akt1