PMC:3585731 / 47778-47926
Annnotations
testone
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2_test
{"project":"2_test","denotations":[{"id":"23469174-22695613-90505472","span":{"begin":16,"end":18},"obj":"22695613"}],"text":"A recent study [15] has demonstrated that, in addition to its role in necroptosis, RIP1 plays an important role in mediating the production of TNFα."}
pmc-enju-pas
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bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T21080","span":{"begin":143,"end":147},"obj":"Protein"},{"id":"T21079","span":{"begin":83,"end":87},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"A recent study [15] has demonstrated that, in addition to its role in necroptosis, RIP1 plays an important role in mediating the production of TNFα."}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T22943","span":{"begin":143,"end":147},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T22929","span":{"begin":83,"end":87},"obj":"http://www.uniprot.org/uniprot/Q13546"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"A recent study [15] has demonstrated that, in addition to its role in necroptosis, RIP1 plays an important role in mediating the production of TNFα."}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T21150","span":{"begin":70,"end":81},"obj":"http://purl.obolibrary.org/obo/GO_0097528"},{"id":"T21126","span":{"begin":70,"end":81},"obj":"http://purl.obolibrary.org/obo/GO_0070266"}],"text":"A recent study [15] has demonstrated that, in addition to its role in necroptosis, RIP1 plays an important role in mediating the production of TNFα."}
sentences
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simple1
{"project":"simple1","denotations":[{"id":"T21332","span":{"begin":143,"end":147},"obj":"Protein"},{"id":"T21331","span":{"begin":83,"end":87},"obj":"Protein"}],"text":"A recent study [15] has demonstrated that, in addition to its role in necroptosis, RIP1 plays an important role in mediating the production of TNFα."}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T22778","span":{"begin":83,"end":87},"obj":"Protein"},{"id":"T22807","span":{"begin":129,"end":139},"obj":"Gene_expression"},{"id":"T22806","span":{"begin":115,"end":124},"obj":"Positive_regulation"},{"id":"T22779","span":{"begin":143,"end":147},"obj":"Protein"}],"relations":[{"id":"R15391","pred":"themeOf","subj":"T22779","obj":"T22807"},{"id":"R15403","pred":"themeOf","subj":"T22807","obj":"T22806"}],"text":"A recent study [15] has demonstrated that, in addition to its role in necroptosis, RIP1 plays an important role in mediating the production of TNFα."}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T23110","span":{"begin":143,"end":147},"obj":"Protein"},{"id":"T23109","span":{"begin":83,"end":87},"obj":"Protein"},{"id":"T23138","span":{"begin":129,"end":139},"obj":"Gene_expression"},{"id":"T23137","span":{"begin":115,"end":124},"obj":"Positive_regulation"}],"relations":[{"id":"R15468","pred":"themeOf","subj":"T23110","obj":"T23138"},{"id":"R15478","pred":"themeOf","subj":"T23138","obj":"T23137"}],"text":"A recent study [15] has demonstrated that, in addition to its role in necroptosis, RIP1 plays an important role in mediating the production of TNFα."}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T23017","span":{"begin":115,"end":124},"obj":"Positive_regulation"},{"id":"T23016","span":{"begin":129,"end":139},"obj":"Gene_expression"},{"id":"T22980","span":{"begin":143,"end":147},"obj":"Protein"},{"id":"T22979","span":{"begin":83,"end":87},"obj":"Protein"}],"relations":[{"id":"R15440","pred":"themeOf","subj":"T23016","obj":"T23017"},{"id":"R15424","pred":"causeOf","subj":"T22979","obj":"T23017"},{"id":"R15425","pred":"themeOf","subj":"T22980","obj":"T23016"}],"text":"A recent study [15] has demonstrated that, in addition to its role in necroptosis, RIP1 plays an important role in mediating the production of TNFα."}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T23528","span":{"begin":83,"end":87},"obj":"Protein"},{"id":"T23638","span":{"begin":115,"end":147},"obj":"Regulation"},{"id":"T23631","span":{"begin":125,"end":147},"obj":"Gene_expression"},{"id":"T23600","span":{"begin":140,"end":147},"obj":"Protein"}],"relations":[{"id":"R15674","pred":"themeOf","subj":"T23600","obj":"T23631"},{"id":"R15680","pred":"themeOf","subj":"T23631","obj":"T23638"}],"text":"A recent study [15] has demonstrated that, in addition to its role in necroptosis, RIP1 plays an important role in mediating the production of TNFα."}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T24732","span":{"begin":147,"end":148},"obj":"."},{"id":"T24731","span":{"begin":143,"end":147},"obj":"NNP"},{"id":"T24730","span":{"begin":140,"end":142},"obj":"IN"},{"id":"T24729","span":{"begin":129,"end":139},"obj":"NN"},{"id":"T24728","span":{"begin":125,"end":128},"obj":"DT"},{"id":"T24727","span":{"begin":115,"end":124},"obj":"VBG"},{"id":"T24726","span":{"begin":112,"end":114},"obj":"IN"},{"id":"T24725","span":{"begin":107,"end":111},"obj":"NN"},{"id":"T24724","span":{"begin":97,"end":106},"obj":"JJ"},{"id":"T24723","span":{"begin":94,"end":96},"obj":"DT"},{"id":"T24722","span":{"begin":88,"end":93},"obj":"VBZ"},{"id":"T24721","span":{"begin":83,"end":87},"obj":"NNP"},{"id":"T24720","span":{"begin":81,"end":82},"obj":","},{"id":"T24719","span":{"begin":70,"end":81},"obj":"NN"},{"id":"T24718","span":{"begin":67,"end":69},"obj":"IN"},{"id":"T24717","span":{"begin":62,"end":66},"obj":"NN"},{"id":"T24716","span":{"begin":58,"end":61},"obj":"PRP$"},{"id":"T24715","span":{"begin":55,"end":57},"obj":"TO"},{"id":"T24714","span":{"begin":46,"end":54},"obj":"NN"},{"id":"T24713","span":{"begin":43,"end":45},"obj":"IN"},{"id":"T24712","span":{"begin":41,"end":42},"obj":","},{"id":"T24711","span":{"begin":37,"end":41},"obj":"IN"},{"id":"T24710","span":{"begin":24,"end":36},"obj":"VBN"},{"id":"T24709","span":{"begin":20,"end":23},"obj":"VBZ"},{"id":"T24708","span":{"begin":18,"end":19},"obj":"NNP"},{"id":"T24707","span":{"begin":16,"end":18},"obj":"CD"},{"id":"T24706","span":{"begin":15,"end":16},"obj":"NNP"},{"id":"T24705","span":{"begin":9,"end":14},"obj":"NN"},{"id":"T24704","span":{"begin":2,"end":8},"obj":"JJ"},{"id":"T24703","span":{"begin":0,"end":1},"obj":"DT"}],"relations":[{"id":"R16702","pred":"prep","subj":"T24726","obj":"T24725"},{"id":"R16703","pred":"pcomp","subj":"T24727","obj":"T24726"},{"id":"R16704","pred":"det","subj":"T24728","obj":"T24729"},{"id":"R16706","pred":"dobj","subj":"T24729","obj":"T24727"},{"id":"R16707","pred":"prep","subj":"T24730","obj":"T24729"},{"id":"R16708","pred":"pobj","subj":"T24731","obj":"T24730"},{"id":"R16710","pred":"punct","subj":"T24732","obj":"T24710"},{"id":"R16813","pred":"det","subj":"T24703","obj":"T24705"},{"id":"R16817","pred":"amod","subj":"T24704","obj":"T24705"},{"id":"R16821","pred":"nsubj","subj":"T24705","obj":"T24710"},{"id":"R16824","pred":"nmod","subj":"T24706","obj":"T24708"},{"id":"R16828","pred":"nummod","subj":"T24707","obj":"T24708"},{"id":"R16834","pred":"nsubj","subj":"T24708","obj":"T24710"},{"id":"R16835","pred":"aux","subj":"T24709","obj":"T24710"},{"id":"R16836","pred":"ROOT","subj":"T24710","obj":"T24710"},{"id":"R16839","pred":"mark","subj":"T24711","obj":"T24722"},{"id":"R16842","pred":"punct","subj":"T24712","obj":"T24722"},{"id":"R16845","pred":"prep","subj":"T24713","obj":"T24722"},{"id":"R16849","pred":"pobj","subj":"T24714","obj":"T24713"},{"id":"R16853","pred":"prep","subj":"T24715","obj":"T24714"},{"id":"R16856","pred":"poss","subj":"T24716","obj":"T24717"},{"id":"R16860","pred":"pobj","subj":"T24717","obj":"T24715"},{"id":"R16864","pred":"prep","subj":"T24718","obj":"T24717"},{"id":"R16866","pred":"pobj","subj":"T24719","obj":"T24718"},{"id":"R16868","pred":"punct","subj":"T24720","obj":"T24722"},{"id":"R16869","pred":"nsubj","subj":"T24721","obj":"T24722"},{"id":"R16871","pred":"ccomp","subj":"T24722","obj":"T24710"},{"id":"R16873","pred":"det","subj":"T24723","obj":"T24725"},{"id":"R16875","pred":"amod","subj":"T24724","obj":"T24725"},{"id":"R16877","pred":"dobj","subj":"T24725","obj":"T24722"}],"text":"A recent study [15] has demonstrated that, in addition to its role in necroptosis, RIP1 plays an important role in mediating the production of TNFα."}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T23284","span":{"begin":115,"end":124},"obj":"Positive_regulation"},{"id":"T23283","span":{"begin":129,"end":139},"obj":"Gene_expression"},{"id":"T23282","span":{"begin":143,"end":147},"obj":"Protein"},{"id":"T23281","span":{"begin":83,"end":87},"obj":"Protein"}],"relations":[{"id":"R15546","pred":"causeOf","subj":"T23281","obj":"T23284"},{"id":"R15547","pred":"themeOf","subj":"T23282","obj":"T23283"},{"id":"R15548","pred":"themeOf","subj":"T23283","obj":"T23284"}],"text":"A recent study [15] has demonstrated that, in addition to its role in necroptosis, RIP1 plays an important role in mediating the production of TNFα."}
test3
{"project":"test3","denotations":[{"id":"T20912","span":{"begin":143,"end":147},"obj":"Protein"},{"id":"T20911","span":{"begin":129,"end":139},"obj":"Gene_expression"},{"id":"T20910","span":{"begin":115,"end":124},"obj":"Positive_regulation"},{"id":"T20909","span":{"begin":107,"end":111},"obj":"Regulation"},{"id":"T20908","span":{"begin":83,"end":87},"obj":"Protein"},{"id":"T20835","span":{"begin":143,"end":147},"obj":"Protein"},{"id":"T20834","span":{"begin":83,"end":87},"obj":"Protein"}],"relations":[{"id":"R13951","pred":"causeOf","subj":"T20908","obj":"T20909"},{"id":"R13952","pred":"themeOf","subj":"T20911","obj":"T20910"},{"id":"R13953","pred":"themeOf","subj":"T20912","obj":"T20911"}],"text":"A recent study [15] has demonstrated that, in addition to its role in necroptosis, RIP1 plays an important role in mediating the production of TNFα."}