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PMC:3585731 / 47639-47738 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T20798 66-75 Gene_expression denotes synthesis
T20797 49-57 Positive_regulation denotes increase
T20751 61-65 Protein denotes TNFα
R13919 T20751 T20798 themeOf TNFα,synthesis
R13931 T20798 T20797 themeOf synthesis,increase

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T22343 94-99 NN denotes death
T22342 89-93 NN denotes cell
T22341 84-88 IN denotes than
T22340 77-83 RB denotes rather
T22339 75-76 -COMMA- denotes ,
T22338 66-75 NN denotes synthesis
T22337 61-65 NN denotes TNFα
T22336 58-60 IN denotes in
T22335 49-57 NN denotes increase
T22334 46-48 DT denotes an
T22333 43-45 TO denotes to
T22332 31-42 RB denotes prominently
T22331 26-30 RB denotes more
T22330 14-25 VB denotes contributed
T22329 4-13 NN denotes signaling
T22328 0-3 NN denotes Akt
R14986 T22329 T22328 arg1Of signaling,Akt
R14987 T22329 T22330 arg1Of signaling,contributed
R14992 T22330 T22332 arg1Of contributed,prominently
R14993 T22330 T22333 arg1Of contributed,to
R14997 T22332 T22331 arg1Of prominently,more
R14998 T22335 T22334 arg1Of increase,an
R14999 T22335 T22336 arg1Of increase,in
R15000 T22335 T22341 arg1Of increase,than
R15001 T22338 T22336 arg2Of synthesis,in
R15002 T22338 T22337 arg1Of synthesis,TNFα
R15003 T22341 T22333 arg2Of than,to
R15004 T22341 T22339 arg1Of than,","
R15005 T22341 T22340 arg1Of than,rather
R15006 T22343 T22341 arg2Of death,than
R15007 T22343 T22342 arg1Of death,cell

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T21078 61-65 Protein denotes TNFα

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T22942 61-65 http://www.uniprot.org/uniprot/P01375 denotes TNFα
T22915 0-3 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T22881 0-3 http://www.uniprot.org/uniprot/P31751 denotes Akt
T22847 0-3 http://www.uniprot.org/uniprot/P31749 denotes Akt

GO-BP

Id Subject Object Predicate Lexical cue
T21191 94-99 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T21174 89-99 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death
T21165 66-75 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T21099 4-13 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

simple1

Id Subject Object Predicate Lexical cue
T21330 61-65 Protein denotes TNFα

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T22777 61-65 Protein denotes TNFα
T22804 66-75 Gene_expression denotes synthesis
T22803 49-57 Positive_regulation denotes increase
R15390 T22777 T22804 themeOf TNFα,synthesis
R15402 T22804 T22803 themeOf synthesis,increase

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T23108 61-65 Protein denotes TNFα
T23136 66-75 Gene_expression denotes synthesis
T23134 49-57 Positive_regulation denotes increase
R15467 T23108 T23136 themeOf TNFα,synthesis
R15477 T23136 T23134 themeOf synthesis,increase

DLUT931

Id Subject Object Predicate Lexical cue
T23015 49-57 Positive_regulation denotes increase
T23014 66-75 Gene_expression denotes synthesis
T22978 61-65 Protein denotes TNFα
R15439 T23014 T23015 themeOf synthesis,increase
R15423 T22978 T23014 themeOf TNFα,synthesis

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T23549 58-75 Protein denotes in TNFα synthesis
T23636 0-99 Positive_regulation denotes Akt signaling contributed more prominently to an increase in TNFα synthesis, rather than cell death
T23603 0-3 Protein denotes Akt
R15675 T23603 T23636 causeOf Akt,"Akt signaling contributed more prominently to an increase in TNFα synthesis, rather than cell death"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T24692 94-99 NN denotes death
T24691 89-93 NN denotes cell
T24690 84-88 IN denotes than
T24689 77-83 RB denotes rather
T24688 75-76 , denotes ,
T24687 66-75 NN denotes synthesis
T24686 61-65 NNP denotes TNFα
T24685 58-60 IN denotes in
T24684 49-57 NN denotes increase
T24683 46-48 DT denotes an
T24682 43-45 TO denotes to
T24681 31-42 RB denotes prominently
T24680 26-30 JJR denotes more
T24679 14-25 VBD denotes contributed
T24678 4-13 VBG denotes signaling
T24677 0-3 NNP denotes Akt
R16719 T24677 T24678 compound Akt,signaling
R16723 T24678 T24679 nsubj signaling,contributed
R16727 T24679 T24679 ROOT contributed,contributed
R16728 T24680 T24681 advmod more,prominently
R16731 T24681 T24679 advmod prominently,contributed
R16735 T24682 T24681 prep to,prominently
R16739 T24683 T24684 det an,increase
R16742 T24684 T24682 pobj increase,to
R16747 T24685 T24684 prep in,increase
R16750 T24686 T24687 compound TNFα,synthesis
R16755 T24687 T24685 pobj synthesis,in
R16756 T24688 T24684 punct ",",increase
R16759 T24689 T24690 advmod rather,than
R16762 T24690 T24684 cc than,increase
R16766 T24691 T24692 compound cell,death
R16769 T24692 T24684 conj death,increase

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T23280 49-57 Positive_regulation denotes increase
T23279 66-75 Gene_expression denotes synthesis
T23277 61-65 Protein denotes TNFα
T23276 0-3 Protein denotes Akt
R15544 T23277 T23279 themeOf TNFα,synthesis
R15545 T23279 T23280 themeOf synthesis,increase

test3

Id Subject Object Predicate Lexical cue
T20907 66-75 Gene_expression denotes synthesis
T20906 61-65 Protein denotes TNFα
T20905 49-57 Positive_regulation denotes increase
T20833 61-65 Protein denotes TNFα
R13949 T20906 T20907 themeOf TNFα,synthesis
R13950 T20907 T20905 themeOf synthesis,increase