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PMC:3585731 / 4699-4814 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T823 67-77 Gene_expression denotes production
T822 32-42 Positive_regulation denotes activation
T821 13-24 Positive_regulation denotes contributes
T810 62-66 Protein denotes TNFα
T809 10-12 Protein denotes S6
R498 T810 T823 themeOf TNFα,production
R502 T822 T821 themeOf activation,contributes
R503 T823 T822 themeOf production,activation

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1672 109-115 VB denotes serves
T1671 101-108 NN denotes pathway
T1670 97-100 NN denotes Akt
T1669 93-96 DT denotes the
T1668 88-92 IN denotes that
T1667 82-87 VB denotes found
T1666 79-81 PRP denotes We
T1665 67-77 NN denotes production
T1664 62-66 NN denotes TNFα
T1663 58-61 CC denotes and
T1662 46-57 NN denotes necroptosis
T1661 43-45 IN denotes of
T1660 32-42 NN denotes activation
T1659 28-31 DT denotes the
T1658 25-27 TO denotes to
T1657 13-24 VB denotes contributes
T1656 10-12 NN denotes S6
T1655 6-9 CC denotes and
R1104 T1656 T1655 arg2Of S6,and
R1107 T1657 T1658 arg1Of contributes,to
R1108 T1660 T1658 arg2Of activation,to
R1109 T1660 T1659 arg1Of activation,the
R1110 T1660 T1661 arg1Of activation,of
R1111 T1662 T1663 arg1Of necroptosis,and
R1112 T1664 T1663 arg2Of TNFα,and
R1113 T1665 T1661 arg2Of production,of
R1114 T1665 T1662 arg1Of production,necroptosis
R1115 T1665 T1664 arg1Of production,TNFα
R1116 T1666 T1667 arg1Of We,found
R1117 T1671 T1669 arg1Of pathway,the
R1118 T1671 T1670 arg1Of pathway,Akt
R1119 T1671 T1672 arg1Of pathway,serves
R1120 T1672 T1667 arg2Of serves,found
R1121 T1672 T1668 arg1Of serves,that

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T947 62-66 Protein denotes TNFα
T946 10-12 Protein denotes S6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1840 97-100 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T1829 97-100 http://www.uniprot.org/uniprot/P31751 denotes Akt
T1818 97-100 http://www.uniprot.org/uniprot/P31749 denotes Akt
T1808 62-66 http://www.uniprot.org/uniprot/P01375 denotes TNFα

GO-BP

Id Subject Object Predicate Lexical cue
T969 32-57 http://purl.obolibrary.org/obo/GO_0070266 denotes activation of necroptosis
T988 46-57 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis

simple1

Id Subject Object Predicate Lexical cue
T1081 62-66 Protein denotes TNFα
T1080 10-12 Protein denotes S6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1765 62-66 Protein denotes TNFα
T1764 10-12 Protein denotes S6
T1776 32-42 Positive_regulation denotes activation
T1775 67-77 Gene_expression denotes production
R1204 T1765 T1775 themeOf TNFα,production
R1208 T1775 T1776 themeOf production,activation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T2149 67-77 Gene_expression denotes production
T2148 32-42 Positive_regulation denotes activation
T2137 62-66 Protein denotes TNFα
T2136 10-12 Protein denotes S6
R1458 T2137 T2149 themeOf TNFα,production
R1469 T2149 T2148 themeOf production,activation

DLUT931

Id Subject Object Predicate Lexical cue
T1897 13-24 Positive_regulation denotes contributes
T1896 32-42 Positive_regulation denotes activation
T1895 67-77 Gene_expression denotes production
T1884 62-66 Protein denotes TNFα
T1883 10-12 Protein denotes S6
R1219 T1884 T1895 themeOf TNFα,production
R1227 T1895 T1896 themeOf production,activation
R1228 T1896 T1897 themeOf activation,contributes

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2802 62-77 Gene_expression denotes TNFα production
T2778 0-5 Entity denotes TORC1
T2769 62-66 Protein denotes TNFα
T2749 93-108 Protein denotes the Akt pathway
T2738 10-12 Protein denotes S6
R1973 T2769 T2802 themeOf TNFα,TNFα production

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2592 109-115 VBZ denotes serves
T2591 101-108 NN denotes pathway
T2590 97-100 NNP denotes Akt
T2589 93-96 DT denotes the
T2588 88-92 IN denotes that
T2587 82-87 VBD denotes found
T2586 79-81 PRP denotes We
T2585 77-78 . denotes .
T2584 67-77 NN denotes production
T2583 62-66 JJ denotes TNFα
T2582 58-61 CC denotes and
T2581 46-57 NN denotes necroptosis
T2580 43-45 IN denotes of
T2579 32-42 NN denotes activation
T2578 28-31 DT denotes the
T2577 25-27 TO denotes to
T2576 13-24 VBZ denotes contributes
T2575 10-12 NNP denotes S6
T2574 6-9 CC denotes and
R1867 T2577 T2576 prep to,contributes
R1868 T2578 T2579 det the,activation
R1869 T2579 T2577 pobj activation,to
R1871 T2580 T2579 prep of,activation
R1872 T2581 T2580 pobj necroptosis,of
R1874 T2582 T2581 cc and,necroptosis
R1875 T2583 T2581 conj TNFα,necroptosis
R1876 T2584 T2579 conj production,activation
R1879 T2586 T2587 nsubj We,found
R1880 T2587 T2587 ROOT found,found
R1882 T2588 T2592 mark that,serves
R1883 T2589 T2591 det the,pathway
R1885 T2590 T2591 compound Akt,pathway
R1886 T2591 T2592 nsubj pathway,serves
R1887 T2592 T2587 ccomp serves,found

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T2198 97-100 Protein denotes Akt
T2197 13-24 Positive_regulation denotes contributes
T2196 32-42 Positive_regulation denotes activation
T2195 67-77 Gene_expression denotes production
T2194 62-66 Protein denotes TNFα
T2193 10-12 Protein denotes S6
R1482 T2194 T2195 themeOf TNFα,production
R1483 T2195 T2196 themeOf production,activation
R1484 T2196 T2197 themeOf activation,contributes

test3

Id Subject Object Predicate Lexical cue
T841 62-66 Protein denotes TNFα
T840 10-12 Protein denotes S6
T869 67-77 Gene_expression denotes production
T868 62-66 Protein denotes TNFα
T867 10-12 Protein denotes S6
R510 T868 T869 themeOf TNFα,production