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PMC:3585731 / 4414-4551 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T818 118-127 Positive_regulation denotes activated
T807 58-62 Protein denotes RIP1

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1634 128-135 IN denotes through
T1633 118-127 VB denotes activated
T1632 115-117 VB denotes is
T1631 111-114 NN denotes Akt
T1630 106-110 IN denotes that
T1629 99-105 VB denotes reveal
T1628 94-98 NN denotes data
T1627 90-93 PRP-DOLLAR- denotes Our
T1626 77-88 NN denotes necroptosis
T1625 70-76 IN denotes during
T1624 63-69 NN denotes kinase
T1623 58-62 NN denotes RIP1
T1622 53-57 IN denotes from
T1621 42-52 RB denotes downstream
T1620 33-41 NN denotes pathways
T1619 29-32 NN denotes JNK
T1618 25-28 CC denotes and
T1617 21-24 NN denotes Akt
T1616 17-20 DT denotes the
T1615 14-16 IN denotes of
T1614 5-13 NN denotes ordering
R1066 T1614 T1615 arg1Of ordering,of
R1067 T1614 T1621 arg1Of ordering,downstream
R1068 T1617 T1618 arg1Of Akt,and
R1069 T1619 T1618 arg2Of JNK,and
R1070 T1620 T1615 arg2Of pathways,of
R1071 T1620 T1616 arg1Of pathways,the
R1072 T1620 T1617 arg1Of pathways,Akt
R1073 T1620 T1619 arg1Of pathways,JNK
R1074 T1624 T1622 arg2Of kinase,from
R1075 T1624 T1623 arg1Of kinase,RIP1
R1076 T1626 T1625 arg2Of necroptosis,during
R1077 T1628 T1627 arg1Of data,Our
R1078 T1628 T1629 arg1Of data,reveal
R1079 T1631 T1632 arg1Of Akt,is
R1080 T1631 T1633 arg2Of Akt,activated
R1081 T1633 T1629 arg2Of activated,reveal
R1082 T1633 T1630 arg1Of activated,that
R1083 T1633 T1632 arg2Of activated,is
R1084 T1633 T1634 arg1Of activated,through

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T944 58-62 Protein denotes RIP1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1838 111-114 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T1837 21-24 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T1827 111-114 http://www.uniprot.org/uniprot/P31751 denotes Akt
T1826 21-24 http://www.uniprot.org/uniprot/P31751 denotes Akt
T1816 111-114 http://www.uniprot.org/uniprot/P31749 denotes Akt
T1815 21-24 http://www.uniprot.org/uniprot/P31749 denotes Akt
T1802 58-62 http://www.uniprot.org/uniprot/Q13546 denotes RIP1

GO-BP

Id Subject Object Predicate Lexical cue
T1034 29-32 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK
T986 77-88 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T967 77-88 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis

GO-MF

Id Subject Object Predicate Lexical cue
T1053 29-32 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK

simple1

Id Subject Object Predicate Lexical cue
T1078 58-62 Protein denotes RIP1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1772 118-127 Positive_regulation denotes activated
T1762 58-62 Protein denotes RIP1

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T2146 118-127 Positive_regulation denotes activated
T2134 58-62 Protein denotes RIP1

DLUT931

Id Subject Object Predicate Lexical cue
T1893 118-127 Positive_regulation denotes activated
T1881 58-62 Protein denotes RIP1

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2792 58-62 Protein denotes RIP1
T2786 58-69 Protein denotes RIP1 kinase
T2781 21-24 Protein denotes Akt
T2735 111-114 Protein denotes Akt
T2731 29-32 Protein denotes JNK

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2552 128-135 IN denotes through
T2551 118-127 VBN denotes activated
T2550 115-117 VBZ denotes is
T2549 111-114 NNP denotes Akt
T2548 106-110 IN denotes that
T2547 99-105 VBP denotes reveal
T2546 94-98 NNS denotes data
T2545 90-93 PRP$ denotes Our
T2544 88-89 . denotes .
T2543 77-88 NN denotes necroptosis
T2542 70-76 IN denotes during
T2541 63-69 NN denotes kinase
T2540 58-62 CD denotes RIP1
T2539 53-57 IN denotes from
T2538 42-52 JJ denotes downstream
T2537 33-41 NNS denotes pathways
T2536 29-32 NNP denotes JNK
T2535 25-28 CC denotes and
T2534 21-24 NNP denotes Akt
T2533 17-20 DT denotes the
T2532 14-16 IN denotes of
T2531 5-13 VBG denotes ordering
R1800 T2532 T2531 prep of,ordering
R1803 T2533 T2534 det the,Akt
R1806 T2534 T2537 nmod Akt,pathways
R1807 T2535 T2534 cc and,Akt
R1809 T2536 T2534 conj JNK,Akt
R1811 T2537 T2532 pobj pathways,of
R1813 T2538 T2537 amod downstream,pathways
R1816 T2539 T2538 prep from,downstream
R1818 T2540 T2541 nummod RIP1,kinase
R1819 T2541 T2539 pobj kinase,from
R1821 T2542 T2531 prep during,ordering
R1822 T2543 T2542 pobj necroptosis,during
R1825 T2545 T2546 poss Our,data
R1826 T2546 T2547 nsubj data,reveal
R1827 T2547 T2547 ROOT reveal,reveal
R1829 T2548 T2551 mark that,activated
R1830 T2549 T2551 nsubjpass Akt,activated
R1832 T2550 T2551 auxpass is,activated
R1833 T2551 T2547 ccomp activated,reveal
R1834 T2552 T2551 prep through,activated

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T2191 118-127 Positive_regulation denotes activated
T2189 111-114 Protein denotes Akt
T2188 58-69 Protein denotes RIP1 kinase
T2187 29-32 Protein denotes JNK
T2186 21-24 Protein denotes Akt
R1479 T2189 T2191 themeOf Akt,activated

test3

Id Subject Object Predicate Lexical cue
T838 58-62 Protein denotes RIP1
T862 118-127 Positive_regulation denotes activated
T861 58-62 Protein denotes RIP1