PMC:3585731 / 43032-43089 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3585731","sourcedb":"PMC","sourceid":"3585731","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3585731","text":"the RIP1-dependent increase in Akt Thr308 phosphorylation","tracks":[{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T22921","span":{"begin":4,"end":8},"obj":"http://www.uniprot.org/uniprot/Q13546"},{"id":"T22860","span":{"begin":31,"end":34},"obj":"http://www.uniprot.org/uniprot/P31751"},{"id":"T22826","span":{"begin":31,"end":34},"obj":"http://www.uniprot.org/uniprot/P31749"},{"id":"T22894","span":{"begin":31,"end":34},"obj":"http://www.uniprot.org/uniprot/Q9Y243"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T22921","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T22860","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T22826","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T22894","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T21571","span":{"begin":42,"end":57},"obj":"NN"},{"id":"T21570","span":{"begin":35,"end":41},"obj":"NN"},{"id":"T21569","span":{"begin":31,"end":34},"obj":"NN"},{"id":"T21568","span":{"begin":28,"end":30},"obj":"IN"},{"id":"T21567","span":{"begin":19,"end":27},"obj":"NN"},{"id":"T21566","span":{"begin":4,"end":18},"obj":"JJ"},{"id":"T21565","span":{"begin":0,"end":3},"obj":"DT"}],"relations":[{"id":"R14212","pred":"arg1Of","subj":"T21567","obj":"T21565"},{"id":"R14213","pred":"arg1Of","subj":"T21567","obj":"T21566"},{"id":"R14214","pred":"arg1Of","subj":"T21567","obj":"T21568"},{"id":"R14215","pred":"arg2Of","subj":"T21571","obj":"T21568"},{"id":"R14216","pred":"arg1Of","subj":"T21571","obj":"T21569"},{"id":"R14217","pred":"arg1Of","subj":"T21571","obj":"T21570"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T21571","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21570","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21569","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21568","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21567","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21566","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21565","pred":"source","obj":"pmc-enju-pas"}]},{"project":"GO-BP","denotations":[{"id":"T21107","span":{"begin":42,"end":57},"obj":"http://purl.obolibrary.org/obo/GO_0016310"}],"attributes":[{"subj":"T21107","pred":"source","obj":"GO-BP"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T23890","span":{"begin":42,"end":57},"obj":"NN"},{"id":"T23889","span":{"begin":35,"end":41},"obj":"NNP"},{"id":"T23888","span":{"begin":31,"end":34},"obj":"NNP"},{"id":"T23887","span":{"begin":28,"end":30},"obj":"IN"},{"id":"T23886","span":{"begin":19,"end":27},"obj":"NN"},{"id":"T23885","span":{"begin":4,"end":18},"obj":"JJ"},{"id":"T23884","span":{"begin":0,"end":3},"obj":"DT"}],"relations":[{"id":"R15913","pred":"det","subj":"T23884","obj":"T23886"},{"id":"R15914","pred":"amod","subj":"T23885","obj":"T23886"},{"id":"R15916","pred":"prep","subj":"T23887","obj":"T23886"},{"id":"R15917","pred":"compound","subj":"T23888","obj":"T23890"},{"id":"R15918","pred":"compound","subj":"T23889","obj":"T23890"},{"id":"R15919","pred":"pobj","subj":"T23890","obj":"T23887"}],"attributes":[{"subj":"T23890","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T23889","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T23888","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T23887","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T23886","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T23885","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T23884","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T21059","span":{"begin":4,"end":8},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T21059","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"}]},{"project":"simple1","denotations":[{"id":"T21311","span":{"begin":4,"end":8},"obj":"Protein"}],"attributes":[{"subj":"T21311","pred":"source","obj":"simple1"}]},{"project":"DLUT931","denotations":[{"id":"T22959","span":{"begin":4,"end":8},"obj":"Protein"}],"attributes":[{"subj":"T22959","pred":"source","obj":"DLUT931"}]},{"project":"BioNLP16_DUT","denotations":[{"id":"T22758","span":{"begin":4,"end":8},"obj":"Protein"}],"attributes":[{"subj":"T22758","pred":"source","obj":"BioNLP16_DUT"}]},{"project":"BioNLP16_Messiy","denotations":[{"id":"T23089","span":{"begin":4,"end":8},"obj":"Protein"}],"attributes":[{"subj":"T23089","pred":"source","obj":"BioNLP16_Messiy"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T23573","span":{"begin":4,"end":18},"obj":"Protein"},{"id":"T23544","span":{"begin":31,"end":41},"obj":"Entity"},{"id":"T23506","span":{"begin":31,"end":34},"obj":"Protein"},{"id":"T23645","span":{"begin":28,"end":57},"obj":"Phosphorylation"},{"id":"T23633","span":{"begin":0,"end":57},"obj":"Regulation"},{"id":"T23626","span":{"begin":0,"end":57},"obj":"Positive_regulation"}],"relations":[{"id":"R15649","pred":"themeOf","subj":"T23506","obj":"T23645"},{"id":"R15662","pred":"partOf","subj":"T23544","obj":"T23506"},{"id":"R15663","pred":"siteOf","subj":"T23544","obj":"T23645"},{"id":"R15669","pred":"causeOf","subj":"T23573","obj":"T23633"},{"id":"R15679","pred":"themeOf","subj":"T23626","obj":"T23633"},{"id":"R15682","pred":"themeOf","subj":"T23645","obj":"T23626"}],"attributes":[{"subj":"T23573","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T23544","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T23506","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T23645","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T23633","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T23626","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]},{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T23202","span":{"begin":9,"end":18},"obj":"Regulation"},{"id":"T23201","span":{"begin":19,"end":27},"obj":"Positive_regulation"},{"id":"T23200","span":{"begin":42,"end":57},"obj":"Phosphorylation"},{"id":"T23199","span":{"begin":31,"end":34},"obj":"Protein"},{"id":"T23198","span":{"begin":4,"end":8},"obj":"Protein"}],"relations":[{"id":"R15510","pred":"causeOf","subj":"T23198","obj":"T23202"},{"id":"R15511","pred":"themeOf","subj":"T23199","obj":"T23200"},{"id":"R15512","pred":"themeOf","subj":"T23200","obj":"T23201"},{"id":"R15513","pred":"themeOf","subj":"T23201","obj":"T23202"}],"attributes":[{"subj":"T23202","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T23201","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T23200","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T23199","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T23198","pred":"source","obj":"bionlp-st-ge-2016-test-tees"}]},{"project":"testone","denotations":[{"id":"T20780","span":{"begin":42,"end":57},"obj":"Phosphorylation"},{"id":"T20779","span":{"begin":19,"end":27},"obj":"Positive_regulation"},{"id":"T20778","span":{"begin":9,"end":18},"obj":"Regulation"},{"id":"T20732","span":{"begin":4,"end":8},"obj":"Protein"}],"relations":[{"id":"R13912","pred":"causeOf","subj":"T20732","obj":"T20778"},{"id":"R13928","pred":"themeOf","subj":"T20779","obj":"T20778"},{"id":"R13929","pred":"themeOf","subj":"T20780","obj":"T20779"}],"attributes":[{"subj":"T20780","pred":"source","obj":"testone"},{"subj":"T20779","pred":"source","obj":"testone"},{"subj":"T20778","pred":"source","obj":"testone"},{"subj":"T20732","pred":"source","obj":"testone"}]},{"project":"test3","denotations":[{"id":"T20870","span":{"begin":42,"end":57},"obj":"Phosphorylation"},{"id":"T20869","span":{"begin":19,"end":27},"obj":"Positive_regulation"},{"id":"T20868","span":{"begin":9,"end":18},"obj":"Regulation"},{"id":"T20867","span":{"begin":4,"end":8},"obj":"Protein"},{"id":"T20814","span":{"begin":4,"end":8},"obj":"Protein"}],"relations":[{"id":"R13941","pred":"causeOf","subj":"T20867","obj":"T20868"},{"id":"R13942","pred":"causeOf","subj":"T20867","obj":"T20869"},{"id":"R13943","pred":"themeOf","subj":"T20869","obj":"T20868"},{"id":"R13944","pred":"themeOf","subj":"T20870","obj":"T20869"}],"attributes":[{"subj":"T20870","pred":"source","obj":"test3"},{"subj":"T20869","pred":"source","obj":"test3"},{"subj":"T20868","pred":"source","obj":"test3"},{"subj":"T20867","pred":"source","obj":"test3"},{"subj":"T20814","pred":"source","obj":"test3"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"bionlp-st-ge-2016-uniprot","color":"#caec93","default":true},{"id":"pmc-enju-pas","color":"#ec93e5"},{"id":"GO-BP","color":"#93ecd9"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#ecbf93"},{"id":"bionlp-st-ge-2016-test-proteins","color":"#a593ec"},{"id":"simple1","color":"#9aec93"},{"id":"DLUT931","color":"#ec93b4"},{"id":"BioNLP16_DUT","color":"#93ceec"},{"id":"BioNLP16_Messiy","color":"#e8ec93"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#d593ec"},{"id":"bionlp-st-ge-2016-test-tees","color":"#93ecbb"},{"id":"testone","color":"#eca193"},{"id":"test3","color":"#939eec"}]}]}}