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PMC:3585731 / 4109-4296 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T817 95-105 Positive_regulation denotes activation
T806 175-179 Protein denotes RIP1

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1594 180-186 NN denotes kinase
T1593 175-179 NN denotes RIP1
T1592 172-174 TO denotes to
T1591 165-171 VB denotes linked
T1590 162-164 VB denotes is
T1589 157-161 WDT denotes that
T1588 147-156 NN denotes signaling
T1587 135-146 NN denotes necroptosis
T1586 132-134 IN denotes of
T1585 122-131 NN denotes component
T1584 112-121 JJ denotes intrinsic
T1583 109-111 DT denotes an
T1582 106-108 VB denotes is
T1581 95-105 NN denotes activation
T1580 91-94 NN denotes Akt
T1579 88-90 IN denotes if
T1578 85-87 CC denotes or
T1577 73-84 NN denotes necroptosis
T1576 69-72 IN denotes for
T1575 59-68 NN denotes conducive
T1574 47-58 NN denotes environment
T1573 44-46 DT denotes an
T1572 35-43 VB denotes provides
T1571 28-34 RB denotes solely
T1570 19-27 NN denotes activity
T1569 15-18 NN denotes Akt
R1016 T1570 T1569 arg1Of activity,Akt
R1017 T1570 T1572 arg1Of activity,provides
R1020 T1572 T1571 arg1Of provides,solely
R1021 T1575 T1572 arg2Of conducive,provides
R1022 T1575 T1573 arg1Of conducive,an
R1023 T1575 T1574 arg1Of conducive,environment
R1024 T1575 T1576 arg1Of conducive,for
R1025 T1577 T1576 arg2Of necroptosis,for
R1026 T1579 T1578 arg2Of if,or
R1027 T1581 T1580 arg1Of activation,Akt
R1028 T1581 T1582 arg1Of activation,is
R1029 T1582 T1579 arg2Of is,if
R1030 T1585 T1582 arg2Of component,is
R1031 T1585 T1583 arg1Of component,an
R1032 T1585 T1584 arg1Of component,intrinsic
R1033 T1585 T1586 arg1Of component,of
R1034 T1585 T1589 arg1Of component,that
R1035 T1585 T1590 arg1Of component,is
R1036 T1585 T1591 arg2Of component,linked
R1037 T1588 T1586 arg2Of signaling,of
R1038 T1588 T1587 arg1Of signaling,necroptosis
R1039 T1591 T1590 arg2Of linked,is
R1040 T1591 T1592 arg1Of linked,to
R1041 T1594 T1592 arg2Of kinase,to
R1042 T1594 T1593 arg1Of kinase,RIP1

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T943 175-179 Protein denotes RIP1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1836 91-94 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T1835 15-18 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T1825 91-94 http://www.uniprot.org/uniprot/P31751 denotes Akt
T1824 15-18 http://www.uniprot.org/uniprot/P31751 denotes Akt
T1814 91-94 http://www.uniprot.org/uniprot/P31749 denotes Akt
T1813 15-18 http://www.uniprot.org/uniprot/P31749 denotes Akt
T1801 175-179 http://www.uniprot.org/uniprot/Q13546 denotes RIP1

GO-BP

Id Subject Object Predicate Lexical cue
T1046 135-156 http://purl.obolibrary.org/obo/GO_0097527 denotes necroptosis signaling
T1016 147-156 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T985 135-146 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T984 73-84 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T966 135-146 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis
T965 73-84 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis

simple1

Id Subject Object Predicate Lexical cue
T1077 175-179 Protein denotes RIP1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1761 175-179 Protein denotes RIP1

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T2133 175-179 Protein denotes RIP1

DLUT931

Id Subject Object Predicate Lexical cue
T1880 175-179 Protein denotes RIP1

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2801 91-105 Positive_regulation denotes Akt activation
T2777 91-94 Protein denotes Akt
T2759 175-179 Protein denotes RIP1
T2754 15-18 Protein denotes Akt
T2741 172-186 Protein denotes to RIP1 kinase
R1978 T2777 T2801 themeOf Akt,Akt activation

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2510 180-186 NN denotes kinase
T2509 175-179 CD denotes RIP1
T2508 172-174 TO denotes to
T2506 162-164 VBZ denotes is
T2505 157-161 DT denotes that
T2504 147-156 VBG denotes signaling
T2503 135-146 NN denotes necroptosis
T2502 132-134 IN denotes of
T2501 122-131 NN denotes component
T2500 112-121 JJ denotes intrinsic
T2499 109-111 DT denotes an
T2498 106-108 VBZ denotes is
T2497 95-105 NN denotes activation
T2496 91-94 NNP denotes Akt
T2495 88-90 IN denotes if
T2494 85-87 CC denotes or
T2493 73-84 NN denotes necroptosis
T2492 69-72 IN denotes for
T2491 59-68 JJ denotes conducive
T2490 47-58 NN denotes environment
T2489 44-46 DT denotes an
T2488 35-43 VBZ denotes provides
T2487 28-34 RB denotes solely
T2486 19-27 NN denotes activity
T2485 15-18 NNP denotes Akt
T2507 165-171 VBN denotes linked
R1735 T2485 T2486 compound Akt,activity
R1736 T2486 T2488 nsubj activity,provides
R1738 T2487 T2488 advmod solely,provides
R1740 T2489 T2490 det an,environment
R1742 T2490 T2488 dobj environment,provides
R1743 T2491 T2490 amod conducive,environment
R1745 T2492 T2491 prep for,conducive
R1746 T2493 T2492 pobj necroptosis,for
R1747 T2494 T2488 cc or,provides
R1749 T2495 T2498 mark if,is
R1750 T2496 T2497 compound Akt,activation
R1751 T2497 T2498 nsubj activation,is
R1753 T2498 T2488 conj is,provides
R1754 T2499 T2501 det an,component
R1755 T2500 T2501 amod intrinsic,component
R1759 T2501 T2498 attr component,is
R1760 T2502 T2501 prep of,component
R1761 T2503 T2502 pobj necroptosis,of
R1763 T2504 T2501 acl signaling,component
R1764 T2505 T2507 nsubjpass that,linked
R1765 T2506 T2507 auxpass is,linked
R1767 T2507 T2504 ccomp linked,signaling
R1768 T2508 T2507 prep to,linked
R1769 T2509 T2510 nummod RIP1,kinase
R1771 T2510 T2508 pobj kinase,to

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T2185 95-105 Positive_regulation denotes activation
T2184 5-14 Positive_regulation denotes dependent
T2183 175-186 Protein denotes RIP1 kinase
T2182 91-94 Protein denotes Akt
T2181 15-18 Protein denotes Akt
R1476 T2181 T2184 themeOf Akt,dependent
R1478 T2182 T2185 themeOf Akt,activation

test3

Id Subject Object Predicate Lexical cue
T837 175-179 Protein denotes RIP1
T860 175-179 Protein denotes RIP1
T859 95-105 Positive_regulation denotes activation