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PMC:3585731 / 39862-39989 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T18205 57-72 Phosphorylation denotes phosphorylation
T18204 39-46 Negative_regulation denotes inhibit
R12102 T18205 T18204 themeOf phosphorylation,inhibit

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T18932 120-126 NN denotes system
T18931 115-119 DT denotes this
T18930 112-114 IN denotes in
T18929 103-111 NN denotes SP600125
T18928 100-102 IN denotes of
T18927 96-99 NN denotes use
T18926 92-95 DT denotes the
T18925 81-91 VB denotes precluding
T18924 79-80 -COMMA- denotes ,
T18923 73-79 NN denotes levels
T18922 57-72 NN denotes phosphorylation
T18921 53-56 NN denotes Akt
T18920 47-52 JJ denotes basal
T18919 39-46 VB denotes inhibit
T18918 33-38 MD denotes could
T18917 25-32 NN denotes effects
T18916 14-24 JJ denotes off-target
T18915 8-13 DT denotes these
T18914 5-7 IN denotes of
T18913 0-4 DT denotes Both
R12565 T18913 T18914 arg1Of Both,of
R12566 T18913 T18918 arg1Of Both,could
R12567 T18913 T18919 arg1Of Both,inhibit
R12568 T18917 T18914 arg2Of effects,of
R12569 T18917 T18915 arg1Of effects,these
R12570 T18917 T18916 arg1Of effects,off-target
R12571 T18919 T18918 arg2Of inhibit,could
R12572 T18919 T18924 arg1Of inhibit,","
R12573 T18919 T18925 modOf inhibit,precluding
R12574 T18923 T18919 arg2Of levels,inhibit
R12575 T18923 T18920 arg1Of levels,basal
R12576 T18923 T18921 arg1Of levels,Akt
R12577 T18923 T18922 arg1Of levels,phosphorylation
R12578 T18927 T18925 arg2Of use,precluding
R12579 T18927 T18926 arg1Of use,the
R12580 T18927 T18928 arg1Of use,of
R12581 T18927 T18930 arg1Of use,in
R12582 T18929 T18928 arg2Of SP600125,of
R12583 T18932 T18930 arg2Of system,in
R12584 T18932 T18931 arg1Of system,this

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T19381 53-56 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T19337 53-56 http://www.uniprot.org/uniprot/P31749 denotes Akt
T19359 53-56 http://www.uniprot.org/uniprot/P31751 denotes Akt

GO-BP

Id Subject Object Predicate Lexical cue
T18449 57-72 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

sentences

Id Subject Object Predicate Lexical cue
T18326 0-127 Sentence denotes Both of these off-target effects could inhibit basal Akt phosphorylation levels, precluding the use of SP600125 in this system.
T247 0-127 Sentence denotes Both of these off-target effects could inhibit basal Akt phosphorylation levels, precluding the use of SP600125 in this system.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T19883 47-80 Phosphorylation denotes basal Akt phosphorylation levels,
T19856 100-111 Entity denotes of SP600125
T19844 53-56 Protein denotes Akt
R13139 T19844 T19883 themeOf Akt,"basal Akt phosphorylation levels,"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T20320 47-52 JJ denotes basal
T20319 39-46 VB denotes inhibit
T20318 33-38 MD denotes could
T20317 25-32 NNS denotes effects
T20316 14-24 JJ denotes off-target
T20315 8-13 DT denotes these
T20314 5-7 IN denotes of
T20313 0-4 DT denotes Both
T20333 126-127 . denotes .
T20332 120-126 NN denotes system
T20331 115-119 DT denotes this
T20330 112-114 IN denotes in
T20329 103-111 CD denotes SP600125
T20328 100-102 IN denotes of
T20327 96-99 NN denotes use
T20326 92-95 DT denotes the
T20325 81-91 VBG denotes precluding
T20324 79-80 , denotes ,
T20323 73-79 NNS denotes levels
T20322 57-72 NN denotes phosphorylation
T20321 53-56 NNP denotes Akt
R13564 T20313 T20319 nsubj Both,inhibit
R13565 T20314 T20313 prep of,Both
R13566 T20315 T20317 det these,effects
R13567 T20316 T20317 amod off-target,effects
R13568 T20317 T20314 pobj effects,of
R13569 T20318 T20319 aux could,inhibit
R13570 T20319 T20319 ROOT inhibit,inhibit
R13571 T20320 T20323 amod basal,levels
R13572 T20321 T20323 compound Akt,levels
R13573 T20322 T20323 compound phosphorylation,levels
R13574 T20323 T20319 dobj levels,inhibit
R13575 T20324 T20319 punct ",",inhibit
R13576 T20325 T20319 advcl precluding,inhibit
R13577 T20326 T20327 det the,use
R13578 T20327 T20325 dobj use,precluding
R13579 T20328 T20327 prep of,use
R13580 T20329 T20328 pobj SP600125,of
R13581 T20330 T20327 prep in,use
R13582 T20331 T20332 det this,system
R13583 T20332 T20330 pobj system,in
R13584 T20333 T20319 punct .,inhibit

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T19612 57-72 Phosphorylation denotes phosphorylation
T19611 39-46 Negative_regulation denotes inhibit
T19610 53-56 Protein denotes Akt
T19613 39-46 Negative_regulation denotes inhibit
R13039 T19610 T19611 themeOf Akt,inhibit
R13040 T19610 T19612 themeOf Akt,phosphorylation
R13041 T19612 T19613 themeOf phosphorylation,inhibit

test3

Id Subject Object Predicate Lexical cue
T18278 57-72 Phosphorylation denotes phosphorylation
T18277 39-46 Negative_regulation denotes inhibit
R12115 T18278 T18277 themeOf phosphorylation,inhibit