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PMC:3585731 / 39726-39861 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T18164 125-129 Protein denotes PDK1
T18163 94-107 Protein denotes p110δ subunit
T18203 82-89 Negative_regulation denotes inhibit
R12085 T18163 T18203 themeOf p110δ subunit,inhibit
R12086 T18164 T18203 themeOf PDK1,inhibit

2_test

Id Subject Object Predicate Lexical cue
23469174-19106158-90505455 117-119 19106158 denotes 41
23469174-17850214-90505456 131-133 17850214 denotes 42

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T18912 133-134 -RRB- denotes ]
T18911 131-133 CD denotes 42
T18910 130-131 -LRB- denotes [
T18909 125-129 NN denotes PDK1
T18908 121-124 CC denotes and
T18907 119-120 -RRB- denotes ]
T18906 117-119 CD denotes 41
T18905 116-117 -LRB- denotes [
T18904 111-115 NN denotes PI3K
T18903 108-110 IN denotes of
T18902 100-107 NN denotes subunit
T18901 94-99 NN denotes p110δ
T18900 90-93 DT denotes the
T18899 82-89 VB denotes inhibit
T18898 78-81 MD denotes may
T18897 73-77 WDT denotes that
T18896 63-72 NN denotes inhibitor
T18895 50-62 JJ denotes non-specific
T18894 41-49 RB denotes somewhat
T18893 39-40 DT denotes a
T18892 36-38 VB denotes is
T18891 27-35 NN denotes SP600125
T18890 22-26 IN denotes that
T18889 12-21 VB denotes published
T18888 7-11 VB denotes been
T18887 3-6 VB denotes has
T18886 0-2 PRP denotes It
R12536 T18889 T18887 arg2Of published,has
R12537 T18889 T18888 arg2Of published,been
R12538 T18891 T18892 arg1Of SP600125,is
R12539 T18892 T18886 arg1Of is,It
R12540 T18892 T18887 arg1Of is,has
R12541 T18892 T18888 arg1Of is,been
R12542 T18892 T18889 arg2Of is,published
R12543 T18892 T18890 arg1Of is,that
R12544 T18895 T18894 arg1Of non-specific,somewhat
R12545 T18896 T18892 arg2Of inhibitor,is
R12546 T18896 T18893 arg1Of inhibitor,a
R12547 T18896 T18895 arg1Of inhibitor,non-specific
R12548 T18896 T18897 arg1Of inhibitor,that
R12549 T18896 T18898 arg1Of inhibitor,may
R12550 T18896 T18899 arg1Of inhibitor,inhibit
R12551 T18899 T18898 arg2Of inhibit,may
R12552 T18902 T18899 arg2Of subunit,inhibit
R12553 T18902 T18900 arg1Of subunit,the
R12554 T18902 T18901 arg1Of subunit,p110δ
R12555 T18902 T18903 arg1Of subunit,of
R12556 T18904 T18905 arg1Of PI3K,[
R12557 T18904 T18908 arg1Of PI3K,and
R12558 T18906 T18905 arg2Of 41,[
R12559 T18907 T18905 arg3Of ],[
R12560 T18908 T18903 arg2Of and,of
R12561 T18909 T18908 arg2Of PDK1,and
R12562 T18909 T18910 arg1Of PDK1,[
R12563 T18911 T18910 arg2Of 42,[
R12564 T18912 T18910 arg3Of ],[

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T18398 125-129 Protein denotes PDK1
T18397 94-107 Protein denotes p110δ subunit

GO-BP

Id Subject Object Predicate Lexical cue
T18470 125-129 http://purl.obolibrary.org/obo/GO_0004740 denotes PDK1
T18469 111-115 http://purl.obolibrary.org/obo/GO_0016303 denotes PI3K

GO-MF

Id Subject Object Predicate Lexical cue
T18480 125-129 http://purl.obolibrary.org/obo/GO_0004740 denotes PDK1
T18479 111-115 http://purl.obolibrary.org/obo/GO_0016303 denotes PI3K

sentences

Id Subject Object Predicate Lexical cue
T18325 0-135 Sentence denotes It has been published that SP600125 is a somewhat non-specific inhibitor that may inhibit the p110δ subunit of PI3K [41] and PDK1 [42].
T246 0-135 Sentence denotes It has been published that SP600125 is a somewhat non-specific inhibitor that may inhibit the p110δ subunit of PI3K [41] and PDK1 [42].

simple1

Id Subject Object Predicate Lexical cue
T18501 125-129 Protein denotes PDK1
T18500 94-107 Protein denotes p110δ subunit

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T19300 82-89 Negative_regulation denotes inhibit
T19278 125-129 Protein denotes PDK1
T19277 94-107 Protein denotes p110δ subunit
R12910 T19277 T19300 themeOf p110δ subunit,inhibit

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T19501 125-129 Protein denotes PDK1
T19500 94-107 Protein denotes p110δ subunit
T19524 63-72 Negative_regulation denotes inhibitor
T19523 82-89 Negative_regulation denotes inhibit
R12979 T19500 T19523 themeOf p110δ subunit,inhibit
R12993 T19523 T19524 themeOf inhibit,inhibitor

DLUT931

Id Subject Object Predicate Lexical cue
T19409 125-129 Protein denotes PDK1
T19408 94-107 Protein denotes p110δ subunit

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue Speculation
T19901 63-134 Negative_regulation denotes inhibitor that may inhibit the p110δ subunit of PI3K [41] and PDK1 [42] true
T19900 63-134 Negative_regulation denotes inhibitor that may inhibit the p110δ subunit of PI3K [41] and PDK1 [42] true
T19878 63-134 Entity denotes inhibitor that may inhibit the p110δ subunit of PI3K [41] and PDK1 [42]
T19854 125-134 Protein denotes PDK1 [42]
T19790 90-120 Protein denotes the p110δ subunit of PI3K [41]
T19782 111-115 Protein denotes PI3K
R13128 T19790 T19900 themeOf the p110δ subunit of PI3K [41],inhibitor that may inhibit the p110δ subunit of PI3K [41] and PDK1 [42]
R13143 T19854 T19901 themeOf PDK1 [42],inhibitor that may inhibit the p110δ subunit of PI3K [41] and PDK1 [42]
R13148 T19878 T19900 causeOf inhibitor that may inhibit the p110δ subunit of PI3K [41] and PDK1 [42],inhibitor that may inhibit the p110δ subunit of PI3K [41] and PDK1 [42]
R13149 T19878 T19901 causeOf inhibitor that may inhibit the p110δ subunit of PI3K [41] and PDK1 [42],inhibitor that may inhibit the p110δ subunit of PI3K [41] and PDK1 [42]

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T20312 134-135 . denotes .
T20311 133-134 NNP denotes ]
T20310 131-133 CD denotes 42
T20309 130-131 NNP denotes [
T20308 125-129 NNP denotes PDK1
T20307 121-124 CC denotes and
T20306 119-120 NNP denotes ]
T20305 117-119 CD denotes 41
T20304 116-117 NNP denotes [
T20303 111-115 NNP denotes PI3K
T20302 108-110 IN denotes of
T20301 100-107 NN denotes subunit
T20300 94-99 JJ denotes p110δ
T20299 90-93 DT denotes the
T20298 82-89 VB denotes inhibit
T20297 78-81 MD denotes may
T20296 73-77 WDT denotes that
T20295 63-72 NN denotes inhibitor
T20294 50-62 JJ denotes non-specific
T20293 41-49 RB denotes somewhat
T20292 39-40 DT denotes a
T20291 36-38 VBZ denotes is
T20290 27-35 CD denotes SP600125
T20289 22-26 IN denotes that
T20288 12-21 VBN denotes published
T20287 7-11 VBN denotes been
T20286 3-6 VBZ denotes has
T20285 0-2 PRP denotes It
R13536 T20285 T20288 nsubjpass It,published
R13537 T20286 T20288 aux has,published
R13538 T20287 T20288 auxpass been,published
R13539 T20288 T20288 ROOT published,published
R13540 T20289 T20291 mark that,is
R13541 T20290 T20291 nsubj SP600125,is
R13542 T20291 T20288 ccomp is,published
R13543 T20292 T20295 det a,inhibitor
R13544 T20293 T20294 advmod somewhat,non-specific
R13545 T20294 T20295 amod non-specific,inhibitor
R13546 T20295 T20291 attr inhibitor,is
R13547 T20296 T20298 nsubj that,inhibit
R13548 T20297 T20298 aux may,inhibit
R13549 T20298 T20295 relcl inhibit,inhibitor
R13550 T20299 T20301 det the,subunit
R13551 T20300 T20301 amod p110δ,subunit
R13552 T20301 T20298 dobj subunit,inhibit
R13553 T20302 T20301 prep of,subunit
R13554 T20303 T20304 compound PI3K,[
R13555 T20304 T20302 pobj [,of
R13556 T20305 T20306 nummod 41,]
R13557 T20306 T20301 conj ],subunit
R13558 T20307 T20306 cc and,]
R13559 T20308 T20309 compound PDK1,[
R13560 T20309 T20306 conj [,]
R13561 T20310 T20311 nummod 42,]
R13562 T20311 T20306 conj ],]
R13563 T20312 T20288 punct .,published

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T19609 111-129 Protein denotes PI3K [41] and PDK1
T19608 94-99 Protein denotes p110δ

test3

Id Subject Object Predicate Lexical cue
T18275 94-107 Protein denotes p110δ subunit
T18276 125-129 Protein denotes PDK1
T18230 125-129 Protein denotes PDK1
T18229 94-107 Protein denotes p110δ subunit