
PMC:3585731 / 35333-35512
Annnotations
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T31810 | 5-14 | Negative_regulation | denotes | deficient |
T31800 | 143-146 | Protein | denotes | 18S |
T31799 | 88-92 | Protein | denotes | TNFα |
T31798 | 46-50 | Protein | denotes | TNFα |
T31797 | 0-4 | Protein | denotes | FADD |
R21995 | T31797 | T31810 | themeOf | FADD,deficient |
R21996 | T31798 | T31810 | themeOf | TNFα,deficient |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T32074 | 15-21 | NN | denotes | Jurkat |
T32073 | 5-14 | JJ | denotes | deficient |
T32072 | 0-4 | NN | denotes | FADD |
T32107 | 176-178 | NN | denotes | hr |
T32106 | 174-175 | CD | denotes | 9 |
T32105 | 171-173 | IN | denotes | at |
T32104 | 166-170 | NN | denotes | blot |
T32103 | 158-165 | JJ | denotes | western |
T32102 | 156-157 | -RRB- | denotes | ) |
T32101 | 155-156 | NN | denotes | B |
T32100 | 154-155 | -LRB- | denotes | ( |
T32099 | 151-153 | CC | denotes | or |
T32098 | 147-150 | NN | denotes | RNA |
T32097 | 143-146 | NN | denotes | 18S |
T32096 | 137-142 | JJ | denotes | human |
T32095 | 131-136 | VB | denotes | using |
T32094 | 120-130 | VB | denotes | normalized |
T32093 | 116-119 | CC | denotes | and |
T32092 | 108-115 | NN | denotes | qRT-PCR |
T32091 | 105-107 | IN | denotes | by |
T32090 | 98-104 | NN | denotes | levels |
T32089 | 93-97 | NN | denotes | mRNA |
T32088 | 88-92 | NN | denotes | TNFα |
T32087 | 82-87 | JJ | denotes | human |
T32086 | 80-81 | -RRB- | denotes | ) |
T32085 | 79-80 | NN | denotes | A |
T32084 | 78-79 | -LRB- | denotes | ( |
T32083 | 75-77 | IN | denotes | of |
T32082 | 63-74 | NN | denotes | measurement |
T32081 | 60-62 | IN | denotes | by |
T32080 | 51-59 | VB | denotes | followed |
T32079 | 46-50 | NN | denotes | TNFα |
T32078 | 41-45 | IN | denotes | with |
T32077 | 33-40 | VB | denotes | treated |
T32076 | 28-32 | VB | denotes | were |
T32075 | 22-27 | NN | denotes | cells |
R22179 | T32075 | T32072 | arg1Of | cells,FADD |
R22180 | T32075 | T32073 | arg1Of | cells,deficient |
R22181 | T32075 | T32074 | arg1Of | cells,Jurkat |
R22182 | T32075 | T32076 | arg1Of | cells,were |
R22183 | T32075 | T32077 | arg2Of | cells,treated |
R22184 | T32075 | T32094 | arg2Of | cells,normalized |
R22185 | T32075 | T32095 | arg1Of | cells,using |
R22186 | T32077 | T32078 | arg1Of | treated,with |
R22187 | T32077 | T32080 | modOf | treated,followed |
R22188 | T32077 | T32091 | arg1Of | treated,by |
R22189 | T32077 | T32093 | arg1Of | treated,and |
R22190 | T32079 | T32078 | arg2Of | TNFα,with |
R22191 | T32082 | T32080 | arg1Of | measurement,followed |
R22192 | T32082 | T32081 | arg2Of | measurement,by |
R22193 | T32082 | T32083 | arg1Of | measurement,of |
R22194 | T32085 | T32084 | arg2Of | A,( |
R22195 | T32086 | T32084 | arg3Of | ),( |
R22196 | T32090 | T32083 | arg2Of | levels,of |
R22197 | T32090 | T32084 | arg1Of | levels,( |
R22198 | T32090 | T32087 | arg1Of | levels,human |
R22199 | T32090 | T32088 | arg1Of | levels,TNFα |
R22200 | T32090 | T32089 | arg1Of | levels,mRNA |
R22201 | T32092 | T32091 | arg2Of | qRT-PCR,by |
R22202 | T32093 | T32076 | arg2Of | and,were |
R22203 | T32094 | T32093 | arg2Of | normalized,and |
R22204 | T32095 | T32094 | arg3Of | using,normalized |
R22205 | T32095 | T32105 | arg1Of | using,at |
R22206 | T32098 | T32096 | arg1Of | RNA,human |
R22207 | T32098 | T32097 | arg1Of | RNA,18S |
R22208 | T32098 | T32099 | arg1Of | RNA,or |
R22209 | T32099 | T32095 | arg2Of | or,using |
R22210 | T32101 | T32100 | arg2Of | B,( |
R22211 | T32102 | T32100 | arg3Of | ),( |
R22212 | T32104 | T32099 | arg2Of | blot,or |
R22213 | T32104 | T32100 | arg1Of | blot,( |
R22214 | T32104 | T32103 | arg1Of | blot,western |
R22215 | T32107 | T32105 | arg2Of | hr,at |
R22216 | T32107 | T32106 | arg1Of | hr,9 |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T31870 | 143-146 | Protein | denotes | 18S |
T31869 | 88-92 | Protein | denotes | TNFα |
T31868 | 46-50 | Protein | denotes | TNFα |
T31867 | 0-4 | Protein | denotes | FADD |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T32136 | 88-92 | http://www.uniprot.org/uniprot/P01375 | denotes | TNFα |
T32135 | 46-50 | http://www.uniprot.org/uniprot/P01375 | denotes | TNFα |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T31880 | 22-27 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T31847 | 0-179 | Sentence | denotes | FADD deficient Jurkat cells were treated with TNFα followed by measurement of (A) human TNFα mRNA levels by qRT-PCR and normalized using human 18S RNA or (B) western blot at 9 hr. |
T221 | 0-179 | Sentence | denotes | FADD deficient Jurkat cells were treated with TNFα followed by measurement of (A) human TNFα mRNA levels by qRT-PCR and normalized using human 18S RNA or (B) western blot at 9 hr. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T32005 | 143-146 | Protein | denotes | 18S |
T32004 | 88-92 | Protein | denotes | TNFα |
T32003 | 46-50 | Protein | denotes | TNFα |
T32002 | 0-4 | Protein | denotes | FADD |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T32112 | 143-146 | Protein | denotes | 18S |
T32111 | 88-92 | Protein | denotes | TNFα |
T32110 | 46-50 | Protein | denotes | TNFα |
T32109 | 0-4 | Protein | denotes | FADD |
T32123 | 5-14 | Negative_regulation | denotes | deficient |
T32122 | 98-104 | Transcription | denotes | levels |
R22218 | T32109 | T32123 | themeOf | FADD,deficient |
R22219 | T32111 | T32122 | themeOf | TNFα,levels |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T32192 | 5-14 | Negative_regulation | denotes | deficient |
T32181 | 143-146 | Protein | denotes | 18S |
T32180 | 88-92 | Protein | denotes | TNFα |
T32179 | 46-50 | Protein | denotes | TNFα |
T32178 | 0-4 | Protein | denotes | FADD |
R22237 | T32178 | T32192 | themeOf | FADD,deficient |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T32172 | 98-104 | Transcription | denotes | levels |
T32171 | 5-14 | Negative_regulation | denotes | deficient |
T32161 | 143-146 | Protein | denotes | 18S |
T32160 | 88-92 | Protein | denotes | TNFα |
T32159 | 46-50 | Protein | denotes | TNFα |
T32158 | 0-4 | Protein | denotes | FADD |
R22228 | T32158 | T32171 | themeOf | FADD,deficient |
R22229 | T32160 | T32172 | themeOf | TNFα,levels |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T32259 | 0-4 | Protein | denotes | FADD |
T32253 | 88-92 | Protein | denotes | TNFα |
T32252 | 143-146 | Protein | denotes | 18S |
T32251 | 137-150 | Protein | denotes | human 18S RNA |
T32245 | 46-81 | Protein | denotes | TNFα followed by measurement of (A) |
T32241 | 108-115 | Protein | denotes | qRT-PCR |
T32235 | 82-97 | Protein | denotes | human TNFα mRNA |
T32264 | 0-27 | Entity | denotes | FADD deficient Jurkat cells |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T31930 | 178-179 | . | denotes | . |
T31929 | 176-178 | NN | denotes | hr |
T31928 | 174-175 | CD | denotes | 9 |
T31927 | 171-173 | IN | denotes | at |
T31926 | 166-170 | NN | denotes | blot |
T31925 | 158-165 | JJ | denotes | western |
T31924 | 156-157 | -RRB- | denotes | ) |
T31923 | 155-156 | NNP | denotes | B |
T31922 | 154-155 | -LRB- | denotes | ( |
T31921 | 151-153 | CC | denotes | or |
T31920 | 147-150 | NNP | denotes | RNA |
T31919 | 143-146 | NNP | denotes | 18S |
T31918 | 137-142 | JJ | denotes | human |
T31917 | 131-136 | VBG | denotes | using |
T31916 | 120-130 | VBN | denotes | normalized |
T31915 | 116-119 | CC | denotes | and |
T31914 | 108-115 | NNP | denotes | qRT-PCR |
T31913 | 105-107 | IN | denotes | by |
T31912 | 98-104 | NNS | denotes | levels |
T31911 | 93-97 | NNP | denotes | mRNA |
T31910 | 88-92 | NNP | denotes | TNFα |
T31909 | 82-87 | JJ | denotes | human |
T31908 | 80-81 | -RRB- | denotes | ) |
T31907 | 79-80 | NN | denotes | A |
T31906 | 78-79 | -LRB- | denotes | ( |
T31905 | 75-77 | IN | denotes | of |
T31904 | 63-74 | NN | denotes | measurement |
T31903 | 60-62 | IN | denotes | by |
T31902 | 51-59 | VBD | denotes | followed |
T31901 | 46-50 | NNP | denotes | TNFα |
T31900 | 41-45 | IN | denotes | with |
T31899 | 33-40 | VBN | denotes | treated |
T31898 | 28-32 | VBD | denotes | were |
T31897 | 22-27 | NNS | denotes | cells |
T31896 | 15-21 | NNP | denotes | Jurkat |
T31895 | 5-14 | NN | denotes | deficient |
T31894 | 0-4 | NNP | denotes | FADD |
R22026 | T31894 | T31897 | amod | FADD,cells |
R22027 | T31895 | T31897 | compound | deficient,cells |
R22028 | T31896 | T31897 | compound | Jurkat,cells |
R22029 | T31897 | T31899 | nsubjpass | cells,treated |
R22030 | T31898 | T31899 | auxpass | were,treated |
R22031 | T31899 | T31899 | ROOT | treated,treated |
R22032 | T31900 | T31899 | prep | with,treated |
R22033 | T31901 | T31900 | pobj | TNFα,with |
R22034 | T31902 | T31899 | advcl | followed,treated |
R22035 | T31903 | T31902 | agent | by,followed |
R22036 | T31904 | T31903 | pobj | measurement,by |
R22037 | T31905 | T31904 | prep | of,measurement |
R22038 | T31906 | T31907 | punct | (,A |
R22039 | T31907 | T31912 | nmod | A,levels |
R22040 | T31908 | T31907 | punct | ),A |
R22041 | T31909 | T31912 | amod | human,levels |
R22042 | T31910 | T31911 | compound | TNFα,mRNA |
R22043 | T31911 | T31912 | compound | mRNA,levels |
R22044 | T31912 | T31905 | pobj | levels,of |
R22045 | T31913 | T31902 | agent | by,followed |
R22046 | T31914 | T31913 | pobj | qRT-PCR,by |
R22047 | T31915 | T31902 | cc | and,followed |
R22048 | T31916 | T31902 | conj | normalized,followed |
R22049 | T31917 | T31916 | advcl | using,normalized |
R22050 | T31918 | T31920 | amod | human,RNA |
R22051 | T31919 | T31920 | compound | 18S,RNA |
R22052 | T31920 | T31917 | dobj | RNA,using |
R22053 | T31921 | T31920 | cc | or,RNA |
R22054 | T31922 | T31923 | punct | (,B |
R22055 | T31923 | T31920 | conj | B,RNA |
R22056 | T31924 | T31923 | punct | ),B |
R22057 | T31925 | T31926 | amod | western,blot |
R22058 | T31926 | T31920 | conj | blot,RNA |
R22059 | T31927 | T31917 | prep | at,using |
R22060 | T31928 | T31929 | nummod | 9,hr |
R22061 | T31929 | T31927 | pobj | hr,at |
R22062 | T31930 | T31899 | punct | .,treated |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T32199 | 137-150 | Protein | denotes | human 18S RNA |
T32198 | 88-97 | Protein | denotes | TNFα mRNA |
T32197 | 46-50 | Protein | denotes | TNFα |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T31832 | 143-146 | Protein | denotes | 18S |
T31831 | 88-92 | Protein | denotes | TNFα |
T31830 | 46-50 | Protein | denotes | TNFα |
T31829 | 5-14 | Negative_regulation | denotes | deficient |
T31828 | 0-4 | Protein | denotes | FADD |
T31818 | 143-146 | Protein | denotes | 18S |
T31817 | 88-92 | Protein | denotes | TNFα |
T31816 | 46-50 | Protein | denotes | TNFα |
T31815 | 0-4 | Protein | denotes | FADD |
R22003 | T31828 | T31829 | themeOf | FADD,deficient |
R22004 | T31830 | T31829 | themeOf | TNFα,deficient |