PMC:3585731 / 3295-3446 JSONTXT

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    testone

    {"project":"testone","denotations":[{"id":"T5056","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T814","span":{"begin":62,"end":72},"obj":"Gene_expression"},{"id":"T803","span":{"begin":57,"end":61},"obj":"Protein"},{"id":"T802","span":{"begin":13,"end":17},"obj":"Protein"}],"relations":[{"id":"R496","pred":"themeOf","subj":"T803","obj":"T814"}],"text":"Importantly, RIP1 kinase dependent activation of JNK and TNFα production has recently been described to be independent of its role in necroptosis [15]."}

    2_test

    {"project":"2_test","denotations":[{"id":"23469174-22695613-90505408","span":{"begin":147,"end":149},"obj":"22695613"}],"text":"Importantly, RIP1 kinase dependent activation of JNK and TNFα production has recently been described to be independent of its role in necroptosis [15]."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T5554","span":{"begin":13,"end":17},"obj":"NN"},{"id":"T1450","span":{"begin":119,"end":121},"obj":"IN"},{"id":"T1449","span":{"begin":107,"end":118},"obj":"JJ"},{"id":"T1448","span":{"begin":104,"end":106},"obj":"VB"},{"id":"T1447","span":{"begin":101,"end":103},"obj":"TO"},{"id":"T1446","span":{"begin":91,"end":100},"obj":"VB"},{"id":"T1445","span":{"begin":86,"end":90},"obj":"VB"},{"id":"T1444","span":{"begin":77,"end":85},"obj":"RB"},{"id":"T1443","span":{"begin":73,"end":76},"obj":"VB"},{"id":"T1442","span":{"begin":62,"end":72},"obj":"NN"},{"id":"T1441","span":{"begin":57,"end":61},"obj":"NN"},{"id":"T1440","span":{"begin":53,"end":56},"obj":"CC"},{"id":"T1439","span":{"begin":49,"end":52},"obj":"NN"},{"id":"T1438","span":{"begin":46,"end":48},"obj":"IN"},{"id":"T1437","span":{"begin":35,"end":45},"obj":"NN"},{"id":"T1436","span":{"begin":25,"end":34},"obj":"JJ"},{"id":"T1435","span":{"begin":18,"end":24},"obj":"NN"},{"id":"T1434","span":{"begin":13,"end":17},"obj":"NN"},{"id":"T1433","span":{"begin":11,"end":12},"obj":"-COMMA-"},{"id":"T1432","span":{"begin":0,"end":11},"obj":"RB"},{"id":"T1457","span":{"begin":149,"end":150},"obj":"-RRB-"},{"id":"T1456","span":{"begin":147,"end":149},"obj":"CD"},{"id":"T1455","span":{"begin":146,"end":147},"obj":"-LRB-"},{"id":"T1454","span":{"begin":134,"end":145},"obj":"NN"},{"id":"T1453","span":{"begin":131,"end":133},"obj":"IN"},{"id":"T1452","span":{"begin":126,"end":130},"obj":"NN"},{"id":"T1451","span":{"begin":122,"end":125},"obj":"PRP-DOLLAR-"}],"relations":[{"id":"R871","pred":"arg1Of","subj":"T1436","obj":"T1434"},{"id":"R872","pred":"arg1Of","subj":"T1436","obj":"T1435"},{"id":"R873","pred":"arg1Of","subj":"T1437","obj":"T1436"},{"id":"R874","pred":"arg1Of","subj":"T1437","obj":"T1438"},{"id":"R875","pred":"arg1Of","subj":"T1437","obj":"T1443"},{"id":"R876","pred":"arg1Of","subj":"T1437","obj":"T1445"},{"id":"R877","pred":"arg2Of","subj":"T1437","obj":"T1446"},{"id":"R878","pred":"arg1Of","subj":"T1437","obj":"T1448"},{"id":"R879","pred":"arg1Of","subj":"T1437","obj":"T1449"},{"id":"R880","pred":"arg1Of","subj":"T1439","obj":"T1440"},{"id":"R881","pred":"arg2Of","subj":"T1440","obj":"T1438"},{"id":"R882","pred":"arg2Of","subj":"T1442","obj":"T1440"},{"id":"R883","pred":"arg1Of","subj":"T1442","obj":"T1441"},{"id":"R884","pred":"arg1Of","subj":"T1446","obj":"T1432"},{"id":"R885","pred":"arg1Of","subj":"T1446","obj":"T1433"},{"id":"R886","pred":"arg2Of","subj":"T1446","obj":"T1443"},{"id":"R887","pred":"arg1Of","subj":"T1446","obj":"T1444"},{"id":"R888","pred":"arg2Of","subj":"T1446","obj":"T1445"},{"id":"R889","pred":"arg3Of","subj":"T1448","obj":"T1446"},{"id":"R890","pred":"arg1Of","subj":"T1448","obj":"T1447"},{"id":"R891","pred":"arg2Of","subj":"T1449","obj":"T1448"},{"id":"R892","pred":"arg1Of","subj":"T1449","obj":"T1450"},{"id":"R893","pred":"arg2Of","subj":"T1452","obj":"T1450"},{"id":"R894","pred":"arg1Of","subj":"T1452","obj":"T1451"},{"id":"R895","pred":"arg1Of","subj":"T1452","obj":"T1453"},{"id":"R896","pred":"arg2Of","subj":"T1454","obj":"T1453"},{"id":"R897","pred":"arg1Of","subj":"T1454","obj":"T1455"},{"id":"R898","pred":"arg2Of","subj":"T1456","obj":"T1455"},{"id":"R899","pred":"arg3Of","subj":"T1457","obj":"T1455"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Importantly, RIP1 kinase dependent activation of JNK and TNFα production has recently been described to be independent of its role in necroptosis [15]."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T940","span":{"begin":57,"end":61},"obj":"Protein"},{"id":"T939","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T5367","span":{"begin":13,"end":17},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Importantly, RIP1 kinase dependent activation of JNK and TNFα production has recently been described to be independent of its role in necroptosis [15]."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T6429","span":{"begin":13,"end":17},"obj":"http://www.uniprot.org/uniprot/Q13546"},{"id":"T1807","span":{"begin":57,"end":61},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T1800","span":{"begin":13,"end":17},"obj":"http://www.uniprot.org/uniprot/Q13546"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Importantly, RIP1 kinase dependent activation of JNK and TNFα production has recently been described to be independent of its role in necroptosis [15]."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T1033","span":{"begin":49,"end":52},"obj":"http://purl.obolibrary.org/obo/GO_0004705"},{"id":"T979","span":{"begin":134,"end":145},"obj":"http://purl.obolibrary.org/obo/GO_0097528"},{"id":"T960","span":{"begin":134,"end":145},"obj":"http://purl.obolibrary.org/obo/GO_0070266"}],"text":"Importantly, RIP1 kinase dependent activation of JNK and TNFα production has recently been described to be independent of its role in necroptosis [15]."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T1052","span":{"begin":49,"end":52},"obj":"http://purl.obolibrary.org/obo/GO_0004705"}],"text":"Importantly, RIP1 kinase dependent activation of JNK and TNFα production has recently been described to be independent of its role in necroptosis [15]."}

    sentences

    {"project":"sentences","denotations":[{"id":"T891","span":{"begin":0,"end":151},"obj":"Sentence"},{"id":"T25","span":{"begin":0,"end":151},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Importantly, RIP1 kinase dependent activation of JNK and TNFα production has recently been described to be independent of its role in necroptosis [15]."}

    simple1

    {"project":"simple1","denotations":[{"id":"T5520","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T1074","span":{"begin":57,"end":61},"obj":"Protein"},{"id":"T1073","span":{"begin":13,"end":17},"obj":"Protein"}],"text":"Importantly, RIP1 kinase dependent activation of JNK and TNFα production has recently been described to be independent of its role in necroptosis [15]."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T1771","span":{"begin":62,"end":72},"obj":"Gene_expression"},{"id":"T1758","span":{"begin":57,"end":61},"obj":"Protein"},{"id":"T1757","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T6379","span":{"begin":13,"end":17},"obj":"Protein"}],"relations":[{"id":"R1202","pred":"themeOf","subj":"T1758","obj":"T1771"}],"text":"Importantly, RIP1 kinase dependent activation of JNK and TNFα production has recently been described to be independent of its role in necroptosis [15]."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T2144","span":{"begin":62,"end":72},"obj":"Gene_expression"},{"id":"T2130","span":{"begin":57,"end":61},"obj":"Protein"},{"id":"T2129","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T6660","span":{"begin":13,"end":17},"obj":"Protein"}],"relations":[{"id":"R1455","pred":"themeOf","subj":"T2130","obj":"T2144"}],"text":"Importantly, RIP1 kinase dependent activation of JNK and TNFα production has recently been described to be independent of its role in necroptosis [15]."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T6540","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T1891","span":{"begin":62,"end":72},"obj":"Gene_expression"},{"id":"T1877","span":{"begin":57,"end":61},"obj":"Protein"},{"id":"T1876","span":{"begin":13,"end":17},"obj":"Protein"}],"relations":[{"id":"R1217","pred":"themeOf","subj":"T1877","obj":"T1891"}],"text":"Importantly, RIP1 kinase dependent activation of JNK and TNFα production has recently been described to be independent of its role in necroptosis [15]."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T7185","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T2800","span":{"begin":57,"end":72},"obj":"Gene_expression"},{"id":"T2791","span":{"begin":18,"end":34},"obj":"Protein"},{"id":"T2771","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T2746","span":{"begin":57,"end":61},"obj":"Protein"},{"id":"T2734","span":{"begin":49,"end":52},"obj":"Protein"}],"relations":[{"id":"R1959","pred":"themeOf","subj":"T2746","obj":"T2800"}],"text":"Importantly, RIP1 kinase dependent activation of JNK and TNFα production has recently been described to be independent of its role in necroptosis [15]."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T2370","span":{"begin":150,"end":151},"obj":"."},{"id":"T2369","span":{"begin":149,"end":150},"obj":"NNP"},{"id":"T2368","span":{"begin":147,"end":149},"obj":"CD"},{"id":"T2367","span":{"begin":146,"end":147},"obj":"NNP"},{"id":"T2366","span":{"begin":134,"end":145},"obj":"NN"},{"id":"T2365","span":{"begin":131,"end":133},"obj":"IN"},{"id":"T2364","span":{"begin":126,"end":130},"obj":"NN"},{"id":"T2363","span":{"begin":122,"end":125},"obj":"PRP$"},{"id":"T2362","span":{"begin":119,"end":121},"obj":"IN"},{"id":"T2361","span":{"begin":107,"end":118},"obj":"JJ"},{"id":"T2360","span":{"begin":104,"end":106},"obj":"VB"},{"id":"T2359","span":{"begin":101,"end":103},"obj":"TO"},{"id":"T2358","span":{"begin":91,"end":100},"obj":"VBN"},{"id":"T2357","span":{"begin":86,"end":90},"obj":"VBN"},{"id":"T2356","span":{"begin":77,"end":85},"obj":"RB"},{"id":"T2355","span":{"begin":73,"end":76},"obj":"VBZ"},{"id":"T2354","span":{"begin":62,"end":72},"obj":"NN"},{"id":"T2353","span":{"begin":57,"end":61},"obj":"NNP"},{"id":"T2352","span":{"begin":53,"end":56},"obj":"CC"},{"id":"T2351","span":{"begin":49,"end":52},"obj":"NNP"},{"id":"T2350","span":{"begin":46,"end":48},"obj":"IN"},{"id":"T2349","span":{"begin":35,"end":45},"obj":"NN"},{"id":"T2348","span":{"begin":25,"end":34},"obj":"JJ"},{"id":"T2347","span":{"begin":18,"end":24},"obj":"NN"},{"id":"T2346","span":{"begin":13,"end":17},"obj":"NNP"},{"id":"T2345","span":{"begin":11,"end":12},"obj":","},{"id":"T2344","span":{"begin":0,"end":11},"obj":"RB"}],"relations":[{"id":"R1621","pred":"advmod","subj":"T2344","obj":"T2358"},{"id":"R1622","pred":"punct","subj":"T2345","obj":"T2358"},{"id":"R1623","pred":"nsubj","subj":"T2346","obj":"T2358"},{"id":"R1625","pred":"amod","subj":"T2347","obj":"T2349"},{"id":"R1629","pred":"amod","subj":"T2348","obj":"T2349"},{"id":"R1633","pred":"appos","subj":"T2349","obj":"T2346"},{"id":"R1637","pred":"prep","subj":"T2350","obj":"T2349"},{"id":"R1640","pred":"pobj","subj":"T2351","obj":"T2350"},{"id":"R1644","pred":"cc","subj":"T2352","obj":"T2351"},{"id":"R1648","pred":"compound","subj":"T2353","obj":"T2354"},{"id":"R1651","pred":"nsubj","subj":"T2354","obj":"T2358"},{"id":"R1655","pred":"aux","subj":"T2355","obj":"T2358"},{"id":"R1661","pred":"advmod","subj":"T2356","obj":"T2358"},{"id":"R1665","pred":"auxpass","subj":"T2357","obj":"T2358"},{"id":"R1669","pred":"ROOT","subj":"T2358","obj":"T2358"},{"id":"R1673","pred":"aux","subj":"T2359","obj":"T2360"},{"id":"R1677","pred":"xcomp","subj":"T2360","obj":"T2358"},{"id":"R1681","pred":"acomp","subj":"T2361","obj":"T2360"},{"id":"R1685","pred":"prep","subj":"T2362","obj":"T2361"},{"id":"R1688","pred":"poss","subj":"T2363","obj":"T2364"},{"id":"R1689","pred":"pobj","subj":"T2364","obj":"T2362"},{"id":"R1692","pred":"prep","subj":"T2365","obj":"T2364"},{"id":"R1696","pred":"compound","subj":"T2366","obj":"T2367"},{"id":"R1700","pred":"pobj","subj":"T2367","obj":"T2365"},{"id":"R1703","pred":"nummod","subj":"T2368","obj":"T2369"},{"id":"R1706","pred":"appos","subj":"T2369","obj":"T2367"},{"id":"R1714","pred":"punct","subj":"T2370","obj":"T2358"}],"text":"Importantly, RIP1 kinase dependent activation of JNK and TNFα production has recently been described to be independent of its role in necroptosis [15]."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T6709","span":{"begin":13,"end":24},"obj":"Protein"},{"id":"T2175","span":{"begin":35,"end":45},"obj":"Positive_regulation"},{"id":"T2174","span":{"begin":35,"end":45},"obj":"Positive_regulation"},{"id":"T2173","span":{"begin":62,"end":72},"obj":"Gene_expression"},{"id":"T2172","span":{"begin":62,"end":72},"obj":"Gene_expression"},{"id":"T2171","span":{"begin":57,"end":61},"obj":"Protein"},{"id":"T2170","span":{"begin":49,"end":52},"obj":"Protein"},{"id":"T2169","span":{"begin":13,"end":24},"obj":"Protein"}],"relations":[{"id":"R1460","pred":"themeOf","subj":"T2170","obj":"T2172"},{"id":"R1465","pred":"themeOf","subj":"T2171","obj":"T2173"},{"id":"R1468","pred":"themeOf","subj":"T2172","obj":"T2174"},{"id":"R1470","pred":"themeOf","subj":"T2173","obj":"T2175"}],"text":"Importantly, RIP1 kinase dependent activation of JNK and TNFα production has recently been described to be independent of its role in necroptosis [15]."}

    test3

    {"project":"test3","denotations":[{"id":"T5186","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T5152","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T834","span":{"begin":57,"end":61},"obj":"Protein"},{"id":"T833","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T854","span":{"begin":62,"end":72},"obj":"Gene_expression"},{"id":"T853","span":{"begin":57,"end":61},"obj":"Protein"},{"id":"T852","span":{"begin":13,"end":17},"obj":"Protein"}],"relations":[{"id":"R505","pred":"themeOf","subj":"T853","obj":"T854"}],"text":"Importantly, RIP1 kinase dependent activation of JNK and TNFα production has recently been described to be independent of its role in necroptosis [15]."}