PMC:3585731 / 31241-31355 JSONTXT

{"project":"testone","denotations":[{"id":"T13476","span":{"begin":49,"end":54},"obj":"Protein"},{"id":"T13475","span":{"begin":35,"end":37},"obj":"Protein"},{"id":"T13474","span":{"begin":27,"end":33},"obj":"Protein"},{"id":"T13525","span":{"begin":67,"end":81},"obj":"Phosphorylation"}],"relations":[{"id":"R8899","pred":"themeOf","subj":"T13474","obj":"T13525"},{"id":"R8900","pred":"themeOf","subj":"T13475","obj":"T13525"},{"id":"R8901","pred":"themeOf","subj":"T13476","obj":"T13525"}],"text":"Some substrates, including p70S6K, S6, GSK-3 and FoxO4, were fully phosphorylated even in the absence of zVAD.fmk."}

{"project":"pmc-enju-pas","denotations":[{"id":"T14453","span":{"begin":105,"end":113},"obj":"NN"},{"id":"T14452","span":{"begin":102,"end":104},"obj":"IN"},{"id":"T14451","span":{"begin":94,"end":101},"obj":"NN"},{"id":"T14450","span":{"begin":90,"end":93},"obj":"DT"},{"id":"T14449","span":{"begin":87,"end":89},"obj":"IN"},{"id":"T14448","span":{"begin":82,"end":86},"obj":"RB"},{"id":"T14447","span":{"begin":67,"end":81},"obj":"VB"},{"id":"T14446","span":{"begin":61,"end":66},"obj":"RB"},{"id":"T14445","span":{"begin":56,"end":60},"obj":"VB"},{"id":"T14444","span":{"begin":54,"end":55},"obj":"-COMMA-"},{"id":"T14443","span":{"begin":49,"end":54},"obj":"NN"},{"id":"T14442","span":{"begin":45,"end":48},"obj":"CC"},{"id":"T14441","span":{"begin":39,"end":44},"obj":"NN"},{"id":"T14440","span":{"begin":37,"end":38},"obj":"-COMMA-"},{"id":"T14439","span":{"begin":35,"end":37},"obj":"NN"},{"id":"T14438","span":{"begin":33,"end":34},"obj":"-COMMA-"},{"id":"T14437","span":{"begin":27,"end":33},"obj":"NN"},{"id":"T14436","span":{"begin":17,"end":26},"obj":"VB"},{"id":"T14435","span":{"begin":15,"end":16},"obj":"-COMMA-"},{"id":"T14434","span":{"begin":5,"end":15},"obj":"NN"},{"id":"T14433","span":{"begin":0,"end":4},"obj":"DT"}],"relations":[{"id":"R9415","pred":"arg1Of","subj":"T14434","obj":"T14433"},{"id":"R9416","pred":"arg1Of","subj":"T14434","obj":"T14435"},{"id":"R9417","pred":"arg1Of","subj":"T14434","obj":"T14436"},{"id":"R9418","pred":"arg1Of","subj":"T14434","obj":"T14445"},{"id":"R9419","pred":"arg2Of","subj":"T14434","obj":"T14447"},{"id":"R9420","pred":"arg1Of","subj":"T14437","obj":"T14438"},{"id":"R9421","pred":"arg1Of","subj":"T14438","obj":"T14440"},{"id":"R9422","pred":"arg2Of","subj":"T14439","obj":"T14438"},{"id":"R9423","pred":"arg1Of","subj":"T14440","obj":"T14442"},{"id":"R9424","pred":"arg2Of","subj":"T14441","obj":"T14440"},{"id":"R9425","pred":"arg2Of","subj":"T14442","obj":"T14436"},{"id":"R9426","pred":"arg2Of","subj":"T14443","obj":"T14442"},{"id":"R9428","pred":"arg1Of","subj":"T14447","obj":"T14444"},{"id":"R9429","pred":"arg2Of","subj":"T14447","obj":"T14445"},{"id":"R9430","pred":"arg1Of","subj":"T14447","obj":"T14446"},{"id":"R9431","pred":"arg1Of","subj":"T14447","obj":"T14449"},{"id":"R9432","pred":"arg1Of","subj":"T14449","obj":"T14448"},{"id":"R9433","pred":"arg2Of","subj":"T14451","obj":"T14449"},{"id":"R9434","pred":"arg1Of","subj":"T14451","obj":"T14450"},{"id":"R9435","pred":"arg1Of","subj":"T14451","obj":"T14452"},{"id":"R9436","pred":"arg2Of","subj":"T14453","obj":"T14452"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Some substrates, including p70S6K, S6, GSK-3 and FoxO4, were fully phosphorylated even in the absence of zVAD.fmk."}

{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T13857","span":{"begin":49,"end":54},"obj":"Protein"},{"id":"T13856","span":{"begin":35,"end":37},"obj":"Protein"},{"id":"T13855","span":{"begin":27,"end":33},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Some substrates, including p70S6K, S6, GSK-3 and FoxO4, were fully phosphorylated even in the absence of zVAD.fmk."}

{"project":"GO-BP","denotations":[{"id":"T13944","span":{"begin":39,"end":42},"obj":"http://purl.obolibrary.org/obo/GO_0050321"}],"text":"Some substrates, including p70S6K, S6, GSK-3 and FoxO4, were fully phosphorylated even in the absence of zVAD.fmk."}

{"project":"GO-MF","denotations":[{"id":"T13960","span":{"begin":39,"end":42},"obj":"http://purl.obolibrary.org/obo/GO_0050321"}],"text":"Some substrates, including p70S6K, S6, GSK-3 and FoxO4, were fully phosphorylated even in the absence of zVAD.fmk."}

{"project":"sentences","denotations":[{"id":"T196","span":{"begin":0,"end":114},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Some substrates, including p70S6K, S6, GSK-3 and FoxO4, were fully phosphorylated even in the absence of zVAD.fmk."}

{"project":"simple1","denotations":[{"id":"T14040","span":{"begin":49,"end":54},"obj":"Protein"},{"id":"T14039","span":{"begin":35,"end":37},"obj":"Protein"},{"id":"T14038","span":{"begin":27,"end":33},"obj":"Protein"}],"text":"Some substrates, including p70S6K, S6, GSK-3 and FoxO4, were fully phosphorylated even in the absence of zVAD.fmk."}

{"project":"BioNLP16_DUT","denotations":[{"id":"T14967","span":{"begin":67,"end":81},"obj":"Phosphorylation"},{"id":"T14936","span":{"begin":49,"end":54},"obj":"Protein"},{"id":"T14935","span":{"begin":35,"end":37},"obj":"Protein"},{"id":"T14934","span":{"begin":27,"end":33},"obj":"Protein"}],"relations":[{"id":"R9923","pred":"themeOf","subj":"T14934","obj":"T14967"},{"id":"R9924","pred":"themeOf","subj":"T14935","obj":"T14967"},{"id":"R9925","pred":"themeOf","subj":"T14936","obj":"T14967"}],"text":"Some substrates, including p70S6K, S6, GSK-3 and FoxO4, were fully phosphorylated even in the absence of zVAD.fmk."}

{"project":"BioNLP16_Messiy","denotations":[{"id":"T15280","span":{"begin":67,"end":81},"obj":"Phosphorylation"},{"id":"T15250","span":{"begin":49,"end":54},"obj":"Protein"},{"id":"T15249","span":{"begin":35,"end":37},"obj":"Protein"},{"id":"T15248","span":{"begin":27,"end":33},"obj":"Protein"}],"relations":[{"id":"R10018","pred":"themeOf","subj":"T15248","obj":"T15280"},{"id":"R10019","pred":"themeOf","subj":"T15249","obj":"T15280"},{"id":"R10020","pred":"themeOf","subj":"T15250","obj":"T15280"}],"text":"Some substrates, including p70S6K, S6, GSK-3 and FoxO4, were fully phosphorylated even in the absence of zVAD.fmk."}

{"project":"DLUT931","denotations":[{"id":"T15154","span":{"begin":67,"end":81},"obj":"Phosphorylation"},{"id":"T15123","span":{"begin":49,"end":54},"obj":"Protein"},{"id":"T15122","span":{"begin":35,"end":37},"obj":"Protein"},{"id":"T15121","span":{"begin":27,"end":33},"obj":"Protein"}],"relations":[{"id":"R9960","pred":"themeOf","subj":"T15121","obj":"T15154"},{"id":"R9961","pred":"themeOf","subj":"T15122","obj":"T15154"},{"id":"R9962","pred":"themeOf","subj":"T15123","obj":"T15154"}],"text":"Some substrates, including p70S6K, S6, GSK-3 and FoxO4, were fully phosphorylated even in the absence of zVAD.fmk."}

{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T15741","span":{"begin":35,"end":37},"obj":"Protein"},{"id":"T15698","span":{"begin":49,"end":54},"obj":"Protein"},{"id":"T15675","span":{"begin":0,"end":55},"obj":"Entity"},{"id":"T15666","span":{"begin":102,"end":113},"obj":"Entity"},{"id":"T15663","span":{"begin":39,"end":44},"obj":"Protein"},{"id":"T15714","span":{"begin":27,"end":33},"obj":"Protein"}],"text":"Some substrates, including p70S6K, S6, GSK-3 and FoxO4, were fully phosphorylated even in the absence of zVAD.fmk."}

{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T16177","span":{"begin":113,"end":114},"obj":"."},{"id":"T16176","span":{"begin":105,"end":113},"obj":"NNP"},{"id":"T16175","span":{"begin":102,"end":104},"obj":"IN"},{"id":"T16174","span":{"begin":94,"end":101},"obj":"NN"},{"id":"T16173","span":{"begin":90,"end":93},"obj":"DT"},{"id":"T16172","span":{"begin":87,"end":89},"obj":"IN"},{"id":"T16171","span":{"begin":82,"end":86},"obj":"RB"},{"id":"T16170","span":{"begin":67,"end":81},"obj":"VBN"},{"id":"T16169","span":{"begin":61,"end":66},"obj":"RB"},{"id":"T16168","span":{"begin":56,"end":60},"obj":"VBD"},{"id":"T16167","span":{"begin":54,"end":55},"obj":","},{"id":"T16166","span":{"begin":49,"end":54},"obj":"NNP"},{"id":"T16165","span":{"begin":45,"end":48},"obj":"CC"},{"id":"T16164","span":{"begin":39,"end":44},"obj":"NNP"},{"id":"T16163","span":{"begin":37,"end":38},"obj":","},{"id":"T16162","span":{"begin":35,"end":37},"obj":"NNP"},{"id":"T16161","span":{"begin":33,"end":34},"obj":","},{"id":"T16160","span":{"begin":27,"end":33},"obj":"NNP"},{"id":"T16159","span":{"begin":17,"end":26},"obj":"VBG"},{"id":"T16158","span":{"begin":15,"end":16},"obj":","},{"id":"T16157","span":{"begin":5,"end":15},"obj":"NNS"},{"id":"T16156","span":{"begin":0,"end":4},"obj":"DT"}],"relations":[{"id":"R10628","pred":"det","subj":"T16156","obj":"T16157"},{"id":"R10629","pred":"nsubjpass","subj":"T16157","obj":"T16170"},{"id":"R10630","pred":"punct","subj":"T16158","obj":"T16157"},{"id":"R10631","pred":"prep","subj":"T16159","obj":"T16157"},{"id":"R10632","pred":"pobj","subj":"T16160","obj":"T16159"},{"id":"R10633","pred":"punct","subj":"T16161","obj":"T16160"},{"id":"R10634","pred":"conj","subj":"T16162","obj":"T16160"},{"id":"R10635","pred":"punct","subj":"T16163","obj":"T16162"},{"id":"R10636","pred":"conj","subj":"T16164","obj":"T16162"},{"id":"R10637","pred":"cc","subj":"T16165","obj":"T16164"},{"id":"R10638","pred":"conj","subj":"T16166","obj":"T16164"},{"id":"R10639","pred":"punct","subj":"T16167","obj":"T16170"},{"id":"R10640","pred":"auxpass","subj":"T16168","obj":"T16170"},{"id":"R10641","pred":"advmod","subj":"T16169","obj":"T16170"},{"id":"R10642","pred":"ROOT","subj":"T16170","obj":"T16170"},{"id":"R10643","pred":"advmod","subj":"T16171","obj":"T16172"},{"id":"R10644","pred":"prep","subj":"T16172","obj":"T16170"},{"id":"R10645","pred":"det","subj":"T16173","obj":"T16174"},{"id":"R10646","pred":"pobj","subj":"T16174","obj":"T16172"},{"id":"R10647","pred":"prep","subj":"T16175","obj":"T16174"},{"id":"R10648","pred":"pobj","subj":"T16176","obj":"T16175"},{"id":"R10649","pred":"punct","subj":"T16177","obj":"T16170"}],"text":"Some substrates, including p70S6K, S6, GSK-3 and FoxO4, were fully phosphorylated even in the absence of zVAD.fmk."}

{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T15371","span":{"begin":67,"end":81},"obj":"Phosphorylation"},{"id":"T15370","span":{"begin":67,"end":81},"obj":"Phosphorylation"},{"id":"T15369","span":{"begin":67,"end":81},"obj":"Phosphorylation"},{"id":"T15368","span":{"begin":67,"end":81},"obj":"Phosphorylation"},{"id":"T15367","span":{"begin":49,"end":54},"obj":"Protein"},{"id":"T15366","span":{"begin":39,"end":44},"obj":"Protein"},{"id":"T15365","span":{"begin":35,"end":37},"obj":"Protein"},{"id":"T15364","span":{"begin":27,"end":33},"obj":"Protein"}],"relations":[{"id":"R10080","pred":"themeOf","subj":"T15364","obj":"T15368"},{"id":"R10081","pred":"themeOf","subj":"T15365","obj":"T15369"},{"id":"R10082","pred":"themeOf","subj":"T15366","obj":"T15370"},{"id":"R10083","pred":"themeOf","subj":"T15367","obj":"T15371"}],"text":"Some substrates, including p70S6K, S6, GSK-3 and FoxO4, were fully phosphorylated even in the absence of zVAD.fmk."}

{"project":"test3","denotations":[{"id":"T13640","span":{"begin":94,"end":101},"obj":"Negative_regulation"},{"id":"T13639","span":{"begin":67,"end":81},"obj":"Phosphorylation"},{"id":"T13638","span":{"begin":49,"end":54},"obj":"Protein"},{"id":"T13637","span":{"begin":35,"end":37},"obj":"Protein"},{"id":"T13636","span":{"begin":27,"end":33},"obj":"Protein"},{"id":"T13574","span":{"begin":49,"end":54},"obj":"Protein"},{"id":"T13573","span":{"begin":35,"end":37},"obj":"Protein"},{"id":"T13572","span":{"begin":27,"end":33},"obj":"Protein"}],"relations":[{"id":"R8941","pred":"themeOf","subj":"T13636","obj":"T13639"},{"id":"R8942","pred":"themeOf","subj":"T13637","obj":"T13639"},{"id":"R8943","pred":"themeOf","subj":"T13638","obj":"T13639"}],"text":"Some substrates, including p70S6K, S6, GSK-3 and FoxO4, were fully phosphorylated even in the absence of zVAD.fmk."}