
PMC:3585731 / 3119-3254
Annnotations
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T801 | 61-65 | Protein | denotes | TNFα |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1425 | 134-135 | -COMMA- | denotes | , |
T1424 | 125-134 | NN | denotes | autophagy |
T1423 | 122-124 | IN | denotes | of |
T1422 | 112-121 | NN | denotes | induction |
T1421 | 108-111 | CC | denotes | and |
T1420 | 101-107 | NN | denotes | stress |
T1419 | 91-100 | JJ | denotes | oxidative |
T1418 | 88-90 | IN | denotes | of |
T1417 | 77-87 | NN | denotes | activation |
T1416 | 75-76 | -COMMA- | denotes | , |
T1415 | 66-75 | NN | denotes | synthesis |
T1414 | 61-65 | NN | denotes | TNFα |
T1413 | 51-60 | JJ | denotes | autocrine |
T1412 | 48-50 | TO | denotes | to |
T1411 | 41-47 | VB | denotes | linked |
T1410 | 36-40 | VB | denotes | been |
T1409 | 32-35 | VB | denotes | has |
T1408 | 26-31 | NN | denotes | cells |
T1407 | 21-25 | NN | denotes | L929 |
T1406 | 18-20 | IN | denotes | in |
T1405 | 14-17 | NN | denotes | JNK |
T1404 | 11-13 | IN | denotes | of |
T1403 | 0-10 | NN | denotes | Activation |
R841 | T1403 | T1404 | arg1Of | Activation,of |
R842 | T1403 | T1406 | arg1Of | Activation,in |
R843 | T1403 | T1409 | arg1Of | Activation,has |
R844 | T1403 | T1410 | arg1Of | Activation,been |
R845 | T1403 | T1411 | arg2Of | Activation,linked |
R846 | T1405 | T1404 | arg2Of | JNK,of |
R847 | T1408 | T1406 | arg2Of | cells,in |
R848 | T1408 | T1407 | arg1Of | cells,L929 |
R849 | T1411 | T1409 | arg2Of | linked,has |
R850 | T1411 | T1410 | arg2Of | linked,been |
R851 | T1411 | T1412 | arg1Of | linked,to |
R852 | T1415 | T1413 | arg1Of | synthesis,autocrine |
R853 | T1415 | T1414 | arg1Of | synthesis,TNFα |
R854 | T1415 | T1416 | arg1Of | synthesis,"," |
R855 | T1416 | T1421 | arg1Of | ",",and |
R856 | T1417 | T1416 | arg2Of | activation,"," |
R857 | T1417 | T1418 | arg1Of | activation,of |
R858 | T1420 | T1418 | arg2Of | stress,of |
R859 | T1420 | T1419 | arg1Of | stress,oxidative |
R860 | T1421 | T1412 | arg2Of | and,to |
R861 | T1421 | T1425 | arg1Of | and,"," |
R864 | T1422 | T1421 | arg2Of | induction,and |
R865 | T1422 | T1423 | arg1Of | induction,of |
R866 | T1424 | T1423 | arg2Of | autophagy,of |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T938 | 61-65 | Protein | denotes | TNFα |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1806 | 61-65 | http://www.uniprot.org/uniprot/P01375 | denotes | TNFα |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1041 | 125-134 | http://purl.obolibrary.org/obo/GO_0006914 | denotes | autophagy |
T1040 | 91-121 | http://purl.obolibrary.org/obo/GO_0008631 | denotes | oxidative stress and induction |
T1039 | 77-107 | http://purl.obolibrary.org/obo/GO_1902884 | denotes | activation of oxidative stress |
T1038 | 66-75 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | synthesis |
T1032 | 14-17 | http://purl.obolibrary.org/obo/GO_0004705 | denotes | JNK |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1051 | 14-17 | http://purl.obolibrary.org/obo/GO_0004705 | denotes | JNK |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1072 | 61-65 | Protein | denotes | TNFα |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1770 | 66-75 | Gene_expression | denotes | synthesis |
T1756 | 61-65 | Protein | denotes | TNFα |
R1201 | T1756 | T1770 | themeOf | TNFα,synthesis |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2143 | 66-75 | Gene_expression | denotes | synthesis |
T2142 | 77-87 | Positive_regulation | denotes | activation |
T2141 | 112-121 | Positive_regulation | denotes | induction |
T2128 | 61-65 | Protein | denotes | TNFα |
R1453 | T2128 | T2143 | themeOf | TNFα,synthesis |
R1463 | T2143 | T2142 | themeOf | synthesis,activation |
R1464 | T2143 | T2141 | themeOf | synthesis,induction |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1890 | 112-121 | Positive_regulation | denotes | induction |
T1889 | 77-87 | Positive_regulation | denotes | activation |
T1888 | 66-75 | Gene_expression | denotes | synthesis |
T1875 | 61-65 | Protein | denotes | TNFα |
R1216 | T1875 | T1888 | themeOf | TNFα,synthesis |
R1223 | T1888 | T1889 | themeOf | synthesis,activation |
R1224 | T1888 | T1890 | themeOf | synthesis,induction |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2796 | 0-31 | Positive_regulation | denotes | Activation of JNK in L929 cells |
T2795 | 0-135 | Binding | denotes | Activation of JNK in L929 cells has been linked to autocrine TNFα synthesis, activation of oxidative stress and induction of autophagy, |
T2750 | 11-17 | Protein | denotes | of JNK |
T2733 | 48-135 | Protein | denotes | to autocrine TNFα synthesis, activation of oxidative stress and induction of autophagy, |
R1953 | T2733 | T2795 | themeOf | "to autocrine TNFα synthesis, activation of oxidative stress and induction of autophagy,","Activation of JNK in L929 cells has been linked to autocrine TNFα synthesis, activation of oxidative stress and induction of autophagy," |
R1962 | T2750 | T2796 | themeOf | of JNK,Activation of JNK in L929 cells |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2336 | 134-135 | , | denotes | , |
T2335 | 125-134 | NN | denotes | autophagy |
T2334 | 122-124 | IN | denotes | of |
T2333 | 112-121 | NN | denotes | induction |
T2332 | 108-111 | CC | denotes | and |
T2331 | 101-107 | NN | denotes | stress |
T2330 | 91-100 | JJ | denotes | oxidative |
T2329 | 88-90 | IN | denotes | of |
T2328 | 77-87 | NN | denotes | activation |
T2327 | 75-76 | , | denotes | , |
T2326 | 66-75 | NN | denotes | synthesis |
T2325 | 61-65 | NNP | denotes | TNFα |
T2324 | 51-60 | VB | denotes | autocrine |
T2323 | 48-50 | TO | denotes | to |
T2322 | 41-47 | VBN | denotes | linked |
T2321 | 36-40 | VBN | denotes | been |
T2320 | 32-35 | VBZ | denotes | has |
T2319 | 26-31 | NNS | denotes | cells |
T2318 | 21-25 | NNP | denotes | L929 |
T2317 | 18-20 | IN | denotes | in |
T2316 | 14-17 | NNP | denotes | JNK |
T2315 | 11-13 | IN | denotes | of |
T2314 | 0-10 | NNP | denotes | Activation |
R1508 | T2314 | T2322 | nsubjpass | Activation,linked |
R1511 | T2315 | T2314 | prep | of,Activation |
R1514 | T2316 | T2315 | pobj | JNK,of |
R1518 | T2317 | T2314 | prep | in,Activation |
R1522 | T2318 | T2319 | compound | L929,cells |
R1526 | T2319 | T2317 | pobj | cells,in |
R1530 | T2320 | T2322 | aux | has,linked |
R1533 | T2321 | T2322 | auxpass | been,linked |
R1537 | T2322 | T2322 | ROOT | linked,linked |
R1542 | T2323 | T2324 | aux | to,autocrine |
R1546 | T2324 | T2322 | xcomp | autocrine,linked |
R1550 | T2325 | T2326 | compound | TNFα,synthesis |
R1554 | T2326 | T2324 | dobj | synthesis,autocrine |
R1561 | T2327 | T2326 | punct | ",",synthesis |
R1565 | T2328 | T2324 | conj | activation,autocrine |
R1569 | T2329 | T2328 | prep | of,activation |
R1572 | T2330 | T2331 | amod | oxidative,stress |
R1576 | T2331 | T2329 | pobj | stress,of |
R1580 | T2332 | T2331 | cc | and,stress |
R1584 | T2333 | T2331 | conj | induction,stress |
R1588 | T2334 | T2333 | prep | of,induction |
R1592 | T2335 | T2334 | pobj | autophagy,of |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2168 | 66-75 | Gene_expression | denotes | synthesis |
T2167 | 0-10 | Positive_regulation | denotes | Activation |
T2166 | 51-65 | Protein | denotes | autocrine TNFα |
T2165 | 14-17 | Protein | denotes | JNK |
R1457 | T2165 | T2167 | themeOf | JNK,Activation |
R1459 | T2166 | T2168 | themeOf | autocrine TNFα,synthesis |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T832 | 61-65 | Protein | denotes | TNFα |
T851 | 61-65 | Protein | denotes | TNFα |