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PMC:3585731 / 28377-28595 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T13503 39-49 Gene_expression denotes expressing
T13460 50-57 Protein denotes Myr-Akt
R8893 T13460 T13503 themeOf Myr-Akt,expressing

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T14201 216-217 -RRB- denotes )
T14200 214-216 NN denotes 7B
T14199 209-213 NNP denotes Fig.
T14198 208-209 -LRB- denotes (
T14197 197-207 NN denotes starvation
T14196 191-196 NN denotes serum
T14195 188-190 IN denotes by
T14194 176-187 NN denotes necroptosis
T14193 169-175 VB denotes induce
T14192 166-168 TO denotes to
T14191 156-165 VB denotes triggered
T14190 152-155 RB denotes not
T14189 147-151 VB denotes were
T14188 143-146 CC denotes and
T14187 141-142 -COMMA- denotes ,
T14186 136-141 NN denotes cells
T14185 128-135 NN denotes control
T14184 121-127 NN denotes vector
T14183 115-120 JJ denotes empty
T14182 111-114 DT denotes the
T14181 106-110 IN denotes from
T14180 88-105 JJ denotes indistinguishable
T14179 81-87 NN denotes manner
T14178 79-80 DT denotes a
T14177 76-78 IN denotes in
T14176 71-75 VB denotes grew
T14175 69-70 -COMMA- denotes ,
T14174 63-69 JJ denotes viable
T14173 58-62 VB denotes were
T14172 50-57 NN denotes Myr-Akt
T14171 39-49 VB denotes expressing
T14170 33-38 NN denotes cells
T14169 29-32 DT denotes the
T14168 24-28 IN denotes that
T14167 19-23 VB denotes note
T14166 16-18 TO denotes to
T14165 6-15 JJ denotes important
T14164 3-5 VB denotes is
T14163 0-2 PRP denotes It
R9145 T14165 T14164 arg2Of important,is
R9146 T14167 T14166 arg1Of note,to
R9147 T14167 T14176 arg1Of note,grew
R9148 T14167 T14189 arg1Of note,were
R9149 T14167 T14191 arg2Of note,triggered
R9150 T14170 T14169 arg1Of cells,the
R9151 T14170 T14171 arg1Of cells,expressing
R9152 T14170 T14173 arg1Of cells,were
R9153 T14170 T14174 arg1Of cells,viable
R9154 T14172 T14171 arg2Of Myr-Akt,expressing
R9155 T14173 T14167 arg2Of were,note
R9156 T14173 T14168 arg1Of were,that
R9157 T14174 T14173 arg2Of viable,were
R9158 T14176 T14177 arg1Of grew,in
R9159 T14176 T14188 arg1Of grew,and
R9160 T14179 T14177 arg2Of manner,in
R9161 T14179 T14178 arg1Of manner,a
R9162 T14179 T14180 arg1Of manner,indistinguishable
R9163 T14180 T14181 arg1Of indistinguishable,from
R9164 T14186 T14181 arg2Of cells,from
R9165 T14186 T14182 arg1Of cells,the
R9166 T14186 T14183 arg1Of cells,empty
R9167 T14186 T14184 arg1Of cells,vector
R9168 T14186 T14185 arg1Of cells,control
R9169 T14188 T14163 arg1Of and,It
R9170 T14188 T14164 arg1Of and,is
R9171 T14188 T14165 arg1Of and,important
R9172 T14188 T14175 arg1Of and,","
R9173 T14188 T14187 arg1Of and,","
R9174 T14191 T14188 arg2Of triggered,and
R9175 T14191 T14189 arg2Of triggered,were
R9176 T14191 T14190 arg1Of triggered,not
R9177 T14191 T14192 modOf triggered,to
R9178 T14193 T14192 arg1Of induce,to
R9179 T14193 T14195 arg1Of induce,by
R9180 T14194 T14193 arg2Of necroptosis,induce
R9181 T14197 T14195 arg2Of starvation,by
R9182 T14197 T14196 arg1Of starvation,serum
R9183 T14197 T14198 arg1Of starvation,(
R9184 T14200 T14198 arg2Of 7B,(
R9185 T14200 T14199 arg1Of 7B,Fig.
R9186 T14201 T14198 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T13841 50-57 Protein denotes Myr-Akt

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T15024 54-57 http://www.uniprot.org/uniprot/P31751 denotes Akt
T14989 54-57 http://www.uniprot.org/uniprot/P31749 denotes Akt
T15059 54-57 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt

UBERON-AE

Id Subject Object Predicate Lexical cue
T13691 191-196 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum

GO-BP

Id Subject Object Predicate Lexical cue
T13894 176-187 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T13880 176-187 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis

GO-CC

Id Subject Object Predicate Lexical cue
T13966 136-141 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T13965 33-38 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T13699 0-218 Sentence denotes It is important to note that the cells expressing Myr-Akt were viable, grew in a manner indistinguishable from the empty vector control cells, and were not triggered to induce necroptosis by serum starvation (Fig. 7B).
T179 0-218 Sentence denotes It is important to note that the cells expressing Myr-Akt were viable, grew in a manner indistinguishable from the empty vector control cells, and were not triggered to induce necroptosis by serum starvation (Fig. 7B).

simple1

Id Subject Object Predicate Lexical cue
T14024 50-57 Protein denotes Myr-Akt

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T14958 39-49 Gene_expression denotes expressing
T14920 50-57 Protein denotes Myr-Akt
R9914 T14920 T14958 themeOf Myr-Akt,expressing

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T15272 39-49 Gene_expression denotes expressing
T15234 50-57 Protein denotes Myr-Akt
R10012 T15234 T15272 themeOf Myr-Akt,expressing

DLUT931

Id Subject Object Predicate Lexical cue
T15145 39-49 Gene_expression denotes expressing
T15107 50-57 Protein denotes Myr-Akt
R9952 T15107 T15145 themeOf Myr-Akt,expressing

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T15759 29-57 Gene_expression denotes the cells expressing Myr-Akt
T15672 50-57 Protein denotes Myr-Akt
T15659 111-141 Entity denotes the empty vector control cells
T15730 29-57 Entity denotes the cells expressing Myr-Akt
R10227 T15672 T15759 themeOf Myr-Akt,the cells expressing Myr-Akt

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T15915 217-218 . denotes .
T15914 216-217 -RRB- denotes )
T15913 214-216 NN denotes 7B
T15912 209-213 NNP denotes Fig.
T15911 208-209 -LRB- denotes (
T15910 197-207 NN denotes starvation
T15909 191-196 NN denotes serum
T15908 188-190 IN denotes by
T15907 176-187 NN denotes necroptosis
T15906 169-175 VB denotes induce
T15905 166-168 TO denotes to
T15904 156-165 VBN denotes triggered
T15903 152-155 RB denotes not
T15902 147-151 VBD denotes were
T15901 143-146 CC denotes and
T15900 141-142 , denotes ,
T15899 136-141 NNS denotes cells
T15898 128-135 NN denotes control
T15897 121-127 NN denotes vector
T15896 115-120 JJ denotes empty
T15895 111-114 DT denotes the
T15894 106-110 IN denotes from
T15893 88-105 JJ denotes indistinguishable
T15892 81-87 NN denotes manner
T15891 79-80 DT denotes a
T15890 76-78 IN denotes in
T15889 71-75 VBD denotes grew
T15888 69-70 , denotes ,
T15887 63-69 JJ denotes viable
T15886 58-62 VBD denotes were
T15885 50-57 NNP denotes Myr-Akt
T15884 39-49 VBG denotes expressing
T15883 33-38 NNS denotes cells
T15882 29-32 DT denotes the
T15881 24-28 IN denotes that
T15880 19-23 VB denotes note
T15879 16-18 TO denotes to
T15878 6-15 JJ denotes important
T15877 3-5 VBZ denotes is
T15876 0-2 PRP denotes It
R10348 T15876 T15877 nsubj It,is
R10349 T15877 T15877 ROOT is,is
R10350 T15878 T15877 acomp important,is
R10351 T15879 T15880 aux to,note
R10352 T15880 T15877 xcomp note,is
R10353 T15881 T15886 mark that,were
R10354 T15882 T15883 det the,cells
R10355 T15883 T15886 nsubj cells,were
R10356 T15884 T15883 acl expressing,cells
R10357 T15885 T15884 dobj Myr-Akt,expressing
R10358 T15886 T15880 ccomp were,note
R10359 T15887 T15886 acomp viable,were
R10360 T15888 T15889 punct ",",grew
R10361 T15889 T15886 conj grew,were
R10362 T15890 T15889 prep in,grew
R10363 T15891 T15892 det a,manner
R10364 T15892 T15890 pobj manner,in
R10365 T15893 T15892 amod indistinguishable,manner
R10366 T15894 T15893 prep from,indistinguishable
R10367 T15895 T15899 det the,cells
R10368 T15896 T15899 amod empty,cells
R10369 T15897 T15898 compound vector,control
R10370 T15898 T15899 compound control,cells
R10371 T15899 T15894 pobj cells,from
R10372 T15900 T15889 punct ",",grew
R10373 T15901 T15889 cc and,grew
R10374 T15902 T15904 auxpass were,triggered
R10375 T15903 T15904 neg not,triggered
R10376 T15904 T15889 conj triggered,grew
R10377 T15905 T15906 aux to,induce
R10378 T15906 T15904 xcomp induce,triggered
R10379 T15907 T15906 dobj necroptosis,induce
R10380 T15908 T15906 prep by,induce
R10381 T15909 T15910 compound serum,starvation
R10382 T15910 T15908 pobj starvation,by
R10383 T15911 T15910 punct (,starvation
R10384 T15912 T15913 compound Fig.,7B
R10385 T15913 T15910 appos 7B,starvation
R10386 T15914 T15910 punct ),starvation
R10387 T15915 T15877 punct .,is

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T15313 54-57 Protein denotes Akt
T15312 50-53 Protein denotes Myr
T15315 39-49 Gene_expression denotes expressing
T15314 39-49 Gene_expression denotes expressing
R10052 T15312 T15314 themeOf Myr,expressing
R10053 T15313 T15315 themeOf Akt,expressing

test3

Id Subject Object Predicate Lexical cue
T13607 50-57 Protein denotes Myr-Akt
T13606 39-49 Gene_expression denotes expressing
T13558 50-57 Protein denotes Myr-Akt
R8930 T13607 T13606 themeOf Myr-Akt,expressing