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PMC:3585731 / 24431-24517 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T30643 33-37 Protein denotes TNFα

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T30731 74-85 NN denotes necroptosis
T30730 67-73 IN denotes during
T30729 56-66 NN denotes activation
T30728 52-55 NN denotes JNK
T30727 48-51 CC denotes and
T30726 38-47 NN denotes synthesis
T30725 33-37 NN denotes TNFα
T30724 23-32 JJ denotes autocrine
T30723 15-22 NN denotes control
T30722 8-14 NN denotes mTORC1
T30721 4-7 CC denotes and
T30720 0-3 NN denotes Akt
R21211 T30720 T30721 arg1Of Akt,and
R21212 T30721 T30730 arg1Of and,during
R21213 T30726 T30722 arg1Of synthesis,mTORC1
R21214 T30726 T30723 arg1Of synthesis,control
R21215 T30726 T30724 arg1Of synthesis,autocrine
R21216 T30726 T30725 arg1Of synthesis,TNFα
R21217 T30726 T30727 arg1Of synthesis,and
R21218 T30727 T30721 arg2Of and,and
R21219 T30729 T30727 arg2Of activation,and
R21220 T30729 T30728 arg1Of activation,JNK
R21221 T30731 T30730 arg2Of necroptosis,during

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T30685 33-37 Protein denotes TNFα

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T30880 33-37 http://www.uniprot.org/uniprot/P01375 denotes TNFα
T30877 0-3 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T30874 0-3 http://www.uniprot.org/uniprot/P31751 denotes Akt
T30871 0-3 http://www.uniprot.org/uniprot/P31749 denotes Akt

GO-BP

Id Subject Object Predicate Lexical cue
T30697 74-85 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T30695 74-85 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis
T30694 52-55 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK
T30693 38-47 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis

GO-MF

Id Subject Object Predicate Lexical cue
T30699 52-55 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK

GO-CC

Id Subject Object Predicate Lexical cue
T30701 8-14 http://purl.obolibrary.org/obo/GO_0031931 denotes mTORC1

sentences

Id Subject Object Predicate Lexical cue
T30670 0-86 Sentence denotes Akt and mTORC1 control autocrine TNFα synthesis and JNK activation during necroptosis.

simple1

Id Subject Object Predicate Lexical cue
T30712 33-37 Protein denotes TNFα

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T30869 15-22 Regulation denotes control
T30868 38-47 Gene_expression denotes synthesis
T30860 33-37 Protein denotes TNFα
R21353 T30860 T30868 themeOf TNFα,synthesis
R21355 T30868 T30869 themeOf synthesis,control

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T30914 38-47 Gene_expression denotes synthesis
T30913 23-32 Positive_regulation denotes autocrine
T30905 33-37 Protein denotes TNFα
R21359 T30905 T30914 themeOf TNFα,synthesis
R21361 T30914 T30913 themeOf synthesis,autocrine

DLUT931

Id Subject Object Predicate Lexical cue
T30895 23-32 Positive_regulation denotes autocrine
T30894 38-47 Gene_expression denotes synthesis
T30886 33-37 Protein denotes TNFα
R21356 T30886 T30894 themeOf TNFα,synthesis
R21358 T30894 T30895 themeOf synthesis,autocrine

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T31152 52-85 Positive_regulation denotes JNK activation during necroptosis
T31143 23-47 Protein denotes autocrine TNFα synthesis
T31129 0-3 Protein denotes Akt
T31121 52-55 Protein denotes JNK
T31120 8-14 Entity denotes mTORC1
R21540 T31121 T31152 themeOf JNK,JNK activation during necroptosis

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T30954 85-86 . denotes .
T30953 74-85 NN denotes necroptosis
T30952 67-73 IN denotes during
T30951 56-66 NN denotes activation
T30950 52-55 NNP denotes JNK
T30949 48-51 CC denotes and
T30948 38-47 NN denotes synthesis
T30947 33-37 NNP denotes TNFα
T30946 23-32 NN denotes autocrine
T30945 15-22 NN denotes control
T30944 8-14 NNP denotes mTORC1
T30943 4-7 CC denotes and
T30942 0-3 NNP denotes Akt
R21376 T30942 T30942 ROOT Akt,Akt
R21377 T30943 T30942 cc and,Akt
R21378 T30944 T30942 conj mTORC1,Akt
R21379 T30945 T30948 nmod control,synthesis
R21380 T30946 T30948 compound autocrine,synthesis
R21381 T30947 T30948 compound TNFα,synthesis
R21382 T30948 T30942 appos synthesis,Akt
R21383 T30949 T30948 cc and,synthesis
R21384 T30950 T30951 compound JNK,activation
R21385 T30951 T30948 conj activation,synthesis
R21386 T30952 T30951 prep during,activation
R21387 T30953 T30952 pobj necroptosis,during
R21388 T30954 T30942 punct .,Akt

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T30925 15-22 Regulation denotes control
T30924 15-22 Regulation denotes control
T30923 15-22 Regulation denotes control
T30922 56-66 Positive_regulation denotes activation
T30921 56-66 Positive_regulation denotes activation
T30920 38-47 Gene_expression denotes synthesis
T30919 52-55 Protein denotes JNK
T30918 33-37 Protein denotes TNFα
T30917 8-14 Protein denotes mTORC1
T30916 0-3 Protein denotes Akt
T30927 15-22 Regulation denotes control
T30926 15-22 Regulation denotes control
R21362 T30916 T30923 causeOf Akt,control
R21363 T30916 T30924 causeOf Akt,control
R21364 T30917 T30925 causeOf mTORC1,control
R21365 T30917 T30926 causeOf mTORC1,control
R21366 T30917 T30927 causeOf mTORC1,control
R21367 T30918 T30920 themeOf TNFα,synthesis
R21368 T30919 T30921 themeOf JNK,activation
R21369 T30920 T30922 themeOf synthesis,activation
R21370 T30920 T30925 themeOf synthesis,control
R21371 T30921 T30923 themeOf activation,control
R21372 T30921 T30926 themeOf activation,control
R21373 T30922 T30924 themeOf activation,control
R21374 T30922 T30927 themeOf activation,control

test3

Id Subject Object Predicate Lexical cue
T30660 33-37 Protein denotes TNFα
T30652 33-37 Protein denotes TNFα