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PMC:3585731 / 22865-23044 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T8939 149-164 Phosphorylation denotes phosphorylation
T8938 140-145 Negative_regulation denotes block
T8903 146-148 Protein denotes S6
T8902 60-66 Protein denotes p70S6K
R5804 T8903 T8939 themeOf S6,phosphorylation
R5818 T8939 T8938 themeOf phosphorylation,block

2_test

Id Subject Object Predicate Lexical cue
23469174-20704563-90505441 79-81 20704563 denotes 33

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T9824 177-178 -RRB- denotes )
T9823 176-177 NN denotes D
T9822 174-175 -COMMA- denotes ,
T9821 171-174 NN denotes S5C
T9820 166-170 NNP denotes Fig.
T9819 165-166 -LRB- denotes (
T9818 149-164 NN denotes phosphorylation
T9817 146-148 NN denotes S6
T9816 140-145 VB denotes block
T9815 137-139 TO denotes to
T9814 128-136 VB denotes required
T9813 113-127 NN denotes concentrations
T9812 109-112 DT denotes the
T9811 106-108 IN denotes at
T9810 94-105 NN denotes necroptosis
T9809 83-93 VB denotes attenuated
T9808 81-82 -RRB- denotes ]
T9807 79-81 CD denotes 33
T9806 78-79 -LRB- denotes [
T9805 67-77 NN denotes PF-4708671
T9804 60-66 NN denotes p70S6K
T9803 57-59 IN denotes of
T9802 47-56 NN denotes inhibitor
T9801 38-46 NN denotes molecule
T9800 32-37 JJ denotes small
T9799 28-31 DT denotes the
T9798 23-27 IN denotes that
T9797 17-22 VB denotes found
T9796 14-16 PRP denotes we
T9795 12-13 -COMMA- denotes ,
T9794 0-12 RB denotes Consistently
R6307 T9796 T9797 arg1Of we,found
R6308 T9797 T9794 arg1Of found,Consistently
R6309 T9797 T9795 arg1Of found,","
R6310 T9802 T9799 arg1Of inhibitor,the
R6311 T9802 T9800 arg1Of inhibitor,small
R6312 T9802 T9801 arg1Of inhibitor,molecule
R6313 T9802 T9803 arg1Of inhibitor,of
R6314 T9802 T9806 arg1Of inhibitor,[
R6315 T9802 T9809 arg1Of inhibitor,attenuated
R6316 T9805 T9803 arg2Of PF-4708671,of
R6317 T9805 T9804 arg1Of PF-4708671,p70S6K
R6318 T9807 T9806 arg2Of 33,[
R6319 T9808 T9806 arg3Of ],[
R6320 T9809 T9797 arg2Of attenuated,found
R6321 T9809 T9798 arg1Of attenuated,that
R6322 T9809 T9811 arg1Of attenuated,at
R6323 T9810 T9809 arg2Of necroptosis,attenuated
R6324 T9813 T9811 arg2Of concentrations,at
R6325 T9813 T9812 arg1Of concentrations,the
R6326 T9813 T9814 arg2Of concentrations,required
R6327 T9813 T9816 arg1Of concentrations,block
R6328 T9816 T9814 arg3Of block,required
R6329 T9816 T9815 arg1Of block,to
R6330 T9818 T9816 arg2Of phosphorylation,block
R6331 T9818 T9817 arg1Of phosphorylation,S6
R6332 T9818 T9819 arg1Of phosphorylation,(
R6333 T9821 T9819 arg2Of S5C,(
R6334 T9821 T9820 arg1Of S5C,Fig.
R6335 T9821 T9822 arg1Of S5C,","
R6336 T9823 T9822 arg2Of D,","
R6337 T9824 T9819 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T9218 146-148 Protein denotes S6
T9217 60-66 Protein denotes p70S6K

GO-BP

Id Subject Object Predicate Lexical cue
T9288 149-164 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T9272 94-105 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T9251 94-105 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis

sentences

Id Subject Object Predicate Lexical cue
T9101 0-179 Sentence denotes Consistently, we found that the small molecule inhibitor of p70S6K PF-4708671 [33] attenuated necroptosis at the concentrations required to block S6 phosphorylation (Fig. S5C, D).
T147 0-179 Sentence denotes Consistently, we found that the small molecule inhibitor of p70S6K PF-4708671 [33] attenuated necroptosis at the concentrations required to block S6 phosphorylation (Fig. S5C, D).

simple1

Id Subject Object Predicate Lexical cue
T9354 146-148 Protein denotes S6
T9353 60-66 Protein denotes p70S6K

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T10222 47-56 Negative_regulation denotes inhibitor
T10221 149-164 Phosphorylation denotes phosphorylation
T10220 140-145 Negative_regulation denotes block
T10192 146-148 Protein denotes S6
T10191 60-66 Protein denotes p70S6K
R6668 T10191 T10222 themeOf p70S6K,inhibitor
R6669 T10192 T10221 themeOf S6,phosphorylation
R6692 T10221 T10220 themeOf phosphorylation,block

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T10479 146-148 Protein denotes S6
T10478 60-66 Protein denotes p70S6K
T10509 149-164 Phosphorylation denotes phosphorylation
T10508 140-145 Negative_regulation denotes block
T10507 47-56 Negative_regulation denotes inhibitor
R6786 T10478 T10507 themeOf p70S6K,inhibitor
R6787 T10479 T10509 themeOf S6,phosphorylation
R6807 T10509 T10508 themeOf phosphorylation,block

DLUT931

Id Subject Object Predicate Lexical cue
T10335 146-148 Protein denotes S6
T10334 60-66 Protein denotes p70S6K
T10368 128-136 Positive_regulation denotes required
T10367 140-145 Negative_regulation denotes block
T10366 149-164 Phosphorylation denotes phosphorylation
T10365 47-56 Negative_regulation denotes inhibitor
R6716 T10334 T10365 themeOf p70S6K,inhibitor
R6717 T10335 T10366 themeOf S6,phosphorylation
R6742 T10366 T10367 themeOf phosphorylation,block
R6743 T10367 T10368 themeOf block,required

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T10935 140-164 Negative_regulation denotes block S6 phosphorylation
T10931 146-164 Phosphorylation denotes S6 phosphorylation
T10919 60-66 Protein denotes p70S6K
T10874 166-169 Protein denotes Fig
T10853 28-82 Entity denotes the small molecule inhibitor of p70S6K PF-4708671 [33]
T10837 60-77 Entity denotes p70S6K PF-4708671
T10823 146-148 Protein denotes S6
T10794 28-82 Entity denotes the small molecule inhibitor of p70S6K PF-4708671 [33]
R6964 T10823 T10931 themeOf S6,S6 phosphorylation
R6976 T10931 T10935 themeOf S6 phosphorylation,block S6 phosphorylation

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T11394 178-179 . denotes .
T11393 177-178 -RRB- denotes )
T11392 176-177 NNP denotes D
T11391 174-175 , denotes ,
T11390 171-174 CD denotes S5C
T11389 169-170 . denotes .
T11388 166-169 NNP denotes Fig
T11387 165-166 -LRB- denotes (
T11386 149-164 NN denotes phosphorylation
T11385 146-148 NNP denotes S6
T11384 140-145 VB denotes block
T11383 137-139 TO denotes to
T11382 128-136 VBN denotes required
T11381 113-127 NNS denotes concentrations
T11380 109-112 DT denotes the
T11379 106-108 IN denotes at
T11378 94-105 NN denotes necroptosis
T11377 83-93 VBD denotes attenuated
T11376 81-82 NNP denotes ]
T11375 79-81 CD denotes 33
T11374 78-79 NNP denotes [
T11373 67-77 NNP denotes PF-4708671
T11372 60-66 NNP denotes p70S6K
T11371 57-59 IN denotes of
T11370 47-56 NN denotes inhibitor
T11369 38-46 NN denotes molecule
T11368 32-37 JJ denotes small
T11367 28-31 DT denotes the
T11366 23-27 IN denotes that
T11365 17-22 VBD denotes found
T11364 14-16 PRP denotes we
T11363 12-13 , denotes ,
T11362 0-12 RB denotes Consistently
R7399 T11362 T11365 advmod Consistently,found
R7400 T11363 T11365 punct ",",found
R7401 T11364 T11365 nsubj we,found
R7402 T11365 T11365 ROOT found,found
R7403 T11366 T11377 mark that,attenuated
R7404 T11367 T11370 det the,inhibitor
R7405 T11368 T11370 amod small,inhibitor
R7406 T11369 T11370 compound molecule,inhibitor
R7407 T11370 T11377 nsubj inhibitor,attenuated
R7408 T11371 T11370 prep of,inhibitor
R7409 T11372 T11374 compound p70S6K,[
R7410 T11373 T11374 compound PF-4708671,[
R7411 T11374 T11371 pobj [,of
R7412 T11375 T11376 nummod 33,]
R7413 T11376 T11370 appos ],inhibitor
R7414 T11377 T11365 ccomp attenuated,found
R7415 T11378 T11377 dobj necroptosis,attenuated
R7416 T11379 T11377 prep at,attenuated
R7417 T11380 T11381 det the,concentrations
R7418 T11381 T11379 pobj concentrations,at
R7419 T11382 T11381 acl required,concentrations
R7420 T11383 T11384 aux to,block
R7421 T11384 T11382 xcomp block,required
R7422 T11385 T11386 compound S6,phosphorylation
R7423 T11386 T11384 dobj phosphorylation,block
R7424 T11387 T11388 punct (,Fig
R7425 T11388 T11386 appos Fig,phosphorylation
R7426 T11389 T11365 punct .,found
R7428 T11390 T11390 ROOT S5C,S5C
R7430 T11391 T11392 punct ",",D
R7433 T11392 T11390 appos D,S5C
R7436 T11393 T11390 punct ),S5C
R7440 T11394 T11390 punct .,S5C

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T10587 140-145 Negative_regulation denotes block
T10586 149-164 Phosphorylation denotes phosphorylation
T10585 146-148 Protein denotes S6
R6836 T10585 T10586 themeOf S6,phosphorylation
R6837 T10586 T10587 themeOf phosphorylation,block

test3

Id Subject Object Predicate Lexical cue
T8984 146-148 Protein denotes S6
T8983 60-66 Protein denotes p70S6K
T9040 149-164 Phosphorylation denotes phosphorylation
T9039 146-148 Protein denotes S6
T9038 60-66 Protein denotes p70S6K
R5835 T9039 T9040 themeOf S6,phosphorylation