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PMC:3585731 / 2228-2510 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
23469174-19524512-90505399 0-1 19524512 denotes 8
23469174-19498109-90505400 5-6 19498109 denotes 9
23469174-19109899-90505401 243-245 19109899 denotes 10

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1287 268-277 JJ denotes important
T1286 259-267 VB denotes provided
T1285 254-258 NN denotes data
T1284 248-253 DT denotes These
T1283 245-246 -RRB- denotes ]
T1282 243-245 CD denotes 10
T1281 242-243 -LRB- denotes [
T1280 234-241 NN denotes process
T1279 229-233 DT denotes this
T1278 220-228 VB denotes regulate
T1277 216-219 MD denotes may
T1276 211-215 WDT denotes that
T1275 205-210 NN denotes genes
T1274 201-204 CD denotes 432
T1273 198-200 IN denotes of
T1272 190-197 NN denotes network
T1271 181-189 JJ denotes cellular
T1270 173-180 JJ denotes diverse
T1269 169-172 CC denotes and
T1268 163-168 JJ denotes broad
T1267 161-162 DT denotes a
T1266 152-160 VB denotes revealed
T1265 150-151 -COMMA- denotes ,
T1264 145-150 NN denotes cells
T1263 140-144 NN denotes L929
T1262 127-139 NN denotes fibrosarcoma
T1261 121-126 NN denotes mouse
T1260 118-120 IN denotes in
T1259 109-117 NN denotes zVAD.fmk
T1258 99-108 NN denotes inhibitor
T1257 87-98 NN denotes pan-caspase
T1256 83-86 DT denotes the
T1255 80-82 IN denotes by
T1254 72-79 VB denotes induced
T1253 60-71 NN denotes necroptosis
T1252 57-59 IN denotes of
T1251 47-56 NN denotes mediators
T1250 43-46 IN denotes for
T1249 36-42 NN denotes screen
T1248 30-35 NN denotes siRNA
T1247 25-29 JJ denotes wide
T1246 18-24 NN denotes genome
T1245 11-17 JJ denotes recent
T1244 9-10 DT denotes A
T1243 6-7 -RRB- denotes ]
T1242 5-6 CD denotes 9
T1241 4-5 -LRB- denotes [
T1240 2-3 -COMMA- denotes ,
T1239 1-2 -RRB- denotes ]
T1238 0-1 CD denotes 8
R680 T1242 T1241 arg2Of 9,[
R681 T1243 T1241 arg3Of ],[
R682 T1249 T1244 arg1Of screen,A
R683 T1249 T1245 arg1Of screen,recent
R684 T1249 T1246 arg1Of screen,genome
R685 T1249 T1247 arg1Of screen,wide
R686 T1249 T1248 arg1Of screen,siRNA
R687 T1249 T1250 arg1Of screen,for
R688 T1249 T1260 arg1Of screen,in
R689 T1249 T1266 arg1Of screen,revealed
R690 T1251 T1250 arg2Of mediators,for
R691 T1251 T1252 arg1Of mediators,of
R692 T1251 T1254 arg2Of mediators,induced
R693 T1253 T1252 arg2Of necroptosis,of
R694 T1259 T1254 arg1Of zVAD.fmk,induced
R695 T1259 T1255 arg2Of zVAD.fmk,by
R696 T1259 T1256 arg1Of zVAD.fmk,the
R697 T1259 T1257 arg1Of zVAD.fmk,pan-caspase
R698 T1259 T1258 arg1Of zVAD.fmk,inhibitor
R699 T1264 T1260 arg2Of cells,in
R700 T1264 T1261 arg1Of cells,mouse
R701 T1264 T1262 arg1Of cells,fibrosarcoma
R702 T1264 T1263 arg1Of cells,L929
R703 T1266 T1265 arg1Of revealed,","
R704 T1268 T1269 arg1Of broad,and
R705 T1271 T1269 arg2Of cellular,and
R706 T1271 T1270 arg1Of cellular,diverse
R707 T1272 T1266 arg2Of network,revealed
R708 T1272 T1267 arg1Of network,a
R709 T1272 T1268 arg1Of network,broad
R710 T1272 T1271 arg1Of network,cellular
R711 T1272 T1273 arg1Of network,of
R712 T1275 T1273 arg2Of genes,of
R713 T1275 T1274 arg1Of genes,432
R714 T1275 T1276 arg1Of genes,that
R715 T1275 T1277 arg1Of genes,may
R716 T1275 T1278 arg1Of genes,regulate
R717 T1278 T1277 arg2Of regulate,may
R718 T1278 T1281 arg1Of regulate,[
R719 T1280 T1278 arg2Of process,regulate
R720 T1280 T1279 arg1Of process,this
R721 T1282 T1281 arg2Of 10,[
R722 T1283 T1281 arg3Of ],[
R723 T1285 T1284 arg1Of data,These
R724 T1285 T1286 arg1Of data,provided

GO-BP

Id Subject Object Predicate Lexical cue
T1013 181-189 http://purl.obolibrary.org/obo/GO_0007349 denotes cellular
T974 60-71 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T955 60-71 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis

sentences

Id Subject Object Predicate Lexical cue
T885 9-247 Sentence denotes A recent genome wide siRNA screen for mediators of necroptosis induced by the pan-caspase inhibitor zVAD.fmk in mouse fibrosarcoma L929 cells, revealed a broad and diverse cellular network of 432 genes that may regulate this process [10].
T19 9-247 Sentence denotes A recent genome wide siRNA screen for mediators of necroptosis induced by the pan-caspase inhibitor zVAD.fmk in mouse fibrosarcoma L929 cells, revealed a broad and diverse cellular network of 432 genes that may regulate this process [10].

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2780 121-150 Entity denotes mouse fibrosarcoma L929 cells
T2762 80-117 Entity denotes by the pan-caspase inhibitor zVAD.fmk
T2756 99-108 Entity denotes inhibitor
T2744 121-150 Entity denotes mouse fibrosarcoma L929 cells
T2737 80-117 Protein denotes by the pan-caspase inhibitor zVAD.fmk
T2736 201-246 Protein denotes 432 genes that may regulate this process [10]

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2090 163-168 JJ denotes broad
T2089 161-162 DT denotes a
T2088 152-160 VBD denotes revealed
T2087 150-151 , denotes ,
T2086 145-150 NNS denotes cells
T2085 140-144 NNP denotes L929
T2084 127-139 NN denotes fibrosarcoma
T2083 121-126 NN denotes mouse
T2082 118-120 IN denotes in
T2081 109-117 NNP denotes zVAD.fmk
T2080 99-108 NN denotes inhibitor
T2079 87-98 NN denotes pan-caspase
T2078 83-86 DT denotes the
T2077 80-82 IN denotes by
T2076 72-79 VBN denotes induced
T2075 60-71 NN denotes necroptosis
T2074 57-59 IN denotes of
T2073 47-56 NNS denotes mediators
T2072 43-46 IN denotes for
T2071 36-42 NN denotes screen
T2070 30-35 NN denotes siRNA
T2069 25-29 JJ denotes wide
T2068 18-24 NN denotes genome
T2067 11-17 JJ denotes recent
T2066 9-10 DT denotes A
T2065 7-8 . denotes .
T2064 6-7 NNP denotes ]
T2063 5-6 CD denotes 9
T2062 4-5 NNP denotes [
T2061 2-3 , denotes ,
T2060 1-2 NNP denotes ]
T2059 0-1 CD denotes 8
T2110 268-277 JJ denotes important
T2109 259-267 VBD denotes provided
T2108 254-258 NNS denotes data
T2107 248-253 DT denotes These
T2106 246-247 . denotes .
T2105 245-246 NNP denotes ]
T2104 243-245 CD denotes 10
T2103 242-243 NNP denotes [
T2102 234-241 NN denotes process
T2101 229-233 DT denotes this
T2100 220-228 VB denotes regulate
T2099 216-219 MD denotes may
T2098 211-215 WDT denotes that
T2097 205-210 NNS denotes genes
T2096 201-204 CD denotes 432
T2095 198-200 IN denotes of
T2094 190-197 NN denotes network
T2093 181-189 JJ denotes cellular
T2092 173-180 JJ denotes diverse
T2091 169-172 CC denotes and
R1360 T2091 T2090 cc and,broad
R1361 T2092 T2090 conj diverse,broad
R1364 T2093 T2094 amod cellular,network
R1368 T2094 T2088 dobj network,revealed
R1372 T2095 T2094 prep of,network
R1374 T2096 T2097 nummod 432,genes
R1375 T2097 T2095 pobj genes,of
R1377 T2098 T2100 nsubj that,regulate
R1380 T2099 T2100 aux may,regulate
R1384 T2100 T2094 relcl regulate,network
R1387 T2101 T2102 det this,process
R1390 T2102 T2100 dobj process,regulate
R1394 T2103 T2105 nmod [,]
R1397 T2104 T2105 nummod 10,]
R1401 T2105 T2100 dobj ],regulate
R1402 T2059 T2060 nummod 8,]
R1404 T2061 T2060 punct ",",]
R1405 T2062 T2064 det [,]
R1406 T2063 T2064 nummod 9,]
R1407 T2064 T2060 appos ],]
R1408 T2106 T2088 punct .,revealed
R1410 T2066 T2071 det A,screen
R1411 T2067 T2071 amod recent,screen
R1412 T2068 T2071 amod genome,screen
R1413 T2107 T2108 det These,data
R1414 T2069 T2071 amod wide,screen
R1415 T2070 T2071 compound siRNA,screen
R1416 T2071 T2088 nsubj screen,revealed
R1417 T2108 T2109 nsubj data,provided
R1418 T2072 T2071 prep for,screen
R1419 T2073 T2072 pobj mediators,for
R1420 T2074 T2073 prep of,mediators
R1421 T2109 T2109 ROOT provided,provided
R1422 T2075 T2074 pobj necroptosis,of
R1423 T2076 T2073 acl induced,mediators
R1424 T2077 T2076 agent by,induced
R1426 T2078 T2080 det the,inhibitor
R1428 T2079 T2080 compound pan-caspase,inhibitor
R1429 T2080 T2077 pobj inhibitor,by
R1430 T2081 T2080 appos zVAD.fmk,inhibitor
R1432 T2082 T2080 prep in,inhibitor
R1433 T2083 T2082 pobj mouse,in
R1435 T2084 T2085 compound fibrosarcoma,L929
R1436 T2085 T2086 compound L929,cells
R1437 T2086 T2080 appos cells,inhibitor
R1439 T2087 T2088 punct ",",revealed
R1440 T2088 T2088 ROOT revealed,revealed
R1442 T2089 T2094 det a,network
R1443 T2090 T2094 amod broad,network

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T2156 72-79 Positive_regulation denotes induced
T2155 91-98 Protein denotes caspase
R1450 T2155 T2156 themeOf caspase,induced