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PMC:3585731 / 17686-17758 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T8102 57-72 Phosphorylation denotes phosphorylation
T8101 34-42 Positive_regulation denotes increase
T8094 12-16 Protein denotes RIP1
R5253 T8102 T8101 themeOf phosphorylation,increase

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T8213 57-72 NN denotes phosphorylation
T8212 50-56 NN denotes Thr308
T8211 46-49 NN denotes Akt
T8210 43-45 IN denotes in
T8209 34-42 NN denotes increase
T8208 17-33 JJ denotes kinase-dependent
T8207 12-16 NN denotes RIP1
T8206 4-11 VB denotes delayed
T8205 0-3 DT denotes the
R5275 T8209 T8205 arg1Of increase,the
R5276 T8209 T8206 arg2Of increase,delayed
R5277 T8209 T8207 arg1Of increase,RIP1
R5278 T8209 T8208 arg1Of increase,kinase-dependent
R5279 T8209 T8210 arg1Of increase,in
R5281 T8213 T8210 arg2Of phosphorylation,in
R5282 T8213 T8211 arg1Of phosphorylation,Akt
R5283 T8213 T8212 arg1Of phosphorylation,Thr308

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T8149 12-16 Protein denotes RIP1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T8459 12-16 http://www.uniprot.org/uniprot/Q13546 denotes RIP1
T8451 46-49 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T8442 46-49 http://www.uniprot.org/uniprot/P31751 denotes Akt
T8433 46-49 http://www.uniprot.org/uniprot/P31749 denotes Akt

GO-BP

Id Subject Object Predicate Lexical cue
T8155 57-72 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

simple1

Id Subject Object Predicate Lexical cue
T8182 12-16 Protein denotes RIP1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T8431 34-42 Positive_regulation denotes increase
T8426 12-16 Protein denotes RIP1
R5493 T8426 T8431 themeOf RIP1,increase

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T8734 34-42 Positive_regulation denotes increase
T8733 17-33 Regulation denotes kinase-dependent
T8727 12-16 Protein denotes RIP1
R5748 T8727 T8734 themeOf RIP1,increase
R5750 T8734 T8733 themeOf increase,kinase-dependent

DLUT931

Id Subject Object Predicate Lexical cue
T8712 17-33 Positive_regulation denotes kinase-dependent
T8711 4-11 Positive_regulation denotes delayed
T8709 34-42 Positive_regulation denotes increase
T8704 12-16 Protein denotes RIP1
R5728 T8704 T8709 themeOf RIP1,increase
R5732 T8709 T8711 themeOf increase,delayed
R5733 T8709 T8712 themeOf increase,kinase-dependent
R5734 T8711 T8709 themeOf delayed,increase

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T8818 12-16 Protein denotes RIP1
T8802 46-49 Protein denotes Akt
T8797 46-56 Entity denotes Akt Thr308
T8794 12-33 Protein denotes RIP1 kinase-dependent
T8831 43-72 Phosphorylation denotes in Akt Thr308 phosphorylation
T8830 0-72 Regulation denotes the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation
T8825 0-72 Positive_regulation denotes the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation
T8822 0-72 Negative_regulation denotes the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation
R5782 T8794 T8830 causeOf RIP1 kinase-dependent,the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation
R5784 T8797 T8802 partOf Akt Thr308,Akt
R5785 T8797 T8831 siteOf Akt Thr308,in Akt Thr308 phosphorylation
R5788 T8802 T8831 themeOf Akt,in Akt Thr308 phosphorylation
R5795 T8825 T8822 themeOf the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation,the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation
R5796 T8825 T8830 themeOf the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation,the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation
R5798 T8831 T8825 themeOf in Akt Thr308 phosphorylation,the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T8487 43-45 IN denotes in
T8490 57-72 NN denotes phosphorylation
T8489 50-56 NNP denotes Thr308
T8488 46-49 NNP denotes Akt
T8486 34-42 NN denotes increase
T8485 17-33 JJ denotes kinase-dependent
T8484 12-16 NNP denotes RIP1
T8483 4-11 VBN denotes delayed
T8482 0-3 DT denotes the
R5512 T8482 T8486 det the,increase
R5513 T8483 T8486 amod delayed,increase
R5514 T8484 T8486 nmod RIP1,increase
R5515 T8485 T8486 amod kinase-dependent,increase
R5517 T8487 T8486 prep in,increase
R5518 T8488 T8490 compound Akt,phosphorylation
R5519 T8489 T8490 compound Thr308,phosphorylation
R5520 T8490 T8486 appos phosphorylation,increase

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T8741 34-42 Positive_regulation denotes increase
T8740 34-42 Positive_regulation denotes increase
T8739 57-72 Phosphorylation denotes phosphorylation
T8738 57-72 Phosphorylation denotes phosphorylation
T8737 50-56 Protein denotes Thr308
T8736 46-49 Protein denotes Akt
T8735 12-23 Protein denotes RIP1 kinase
R5751 T8736 T8738 themeOf Akt,phosphorylation
R5752 T8737 T8739 themeOf Thr308,phosphorylation
R5753 T8738 T8740 themeOf phosphorylation,increase
R5754 T8739 T8741 themeOf phosphorylation,increase

test3

Id Subject Object Predicate Lexical cue
T8121 57-72 Phosphorylation denotes phosphorylation
T8120 34-42 Positive_regulation denotes increase
T8119 12-16 Protein denotes RIP1
T8112 12-16 Protein denotes RIP1
R5256 T8121 T8120 themeOf phosphorylation,increase