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PMC:3585731 / 17662-18963 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T8111 1240-1250 Positive_regulation denotes activation
T8110 1219-1223 Regulation denotes role
T8109 1125-1135 Positive_regulation denotes activation
T8108 1028-1037 Negative_regulation denotes prevented
T8107 909-919 Positive_regulation denotes activation
T8106 756-771 Phosphorylation denotes phosphorylation
T8105 479-488 Negative_regulation denotes inhibitor
T8104 389-404 Phosphorylation denotes phosphorylation
T8103 203-209 Positive_regulation denotes induce
T8102 81-96 Phosphorylation denotes phosphorylation
T8101 58-66 Positive_regulation denotes increase
T8098 839-843 Protein denotes bFGF
T8097 800-804 Protein denotes bFGF
T8096 590-594 Protein denotes bFGF
T8095 582-586 Protein denotes TNFα
T8094 36-40 Protein denotes RIP1
R5253 T8102 T8101 themeOf phosphorylation,increase
R5254 T8111 T8110 themeOf activation,role

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T8420 1295-1300 NN denotes death
T8419 1290-1294 NN denotes cell
T8418 1278-1289 JJ denotes necroptotic
T8417 1275-1277 IN denotes of
T8416 1265-1274 NN denotes induction
T8415 1261-1264 DT denotes the
T8414 1258-1260 IN denotes in
T8413 1254-1257 NN denotes Akt
T8412 1251-1253 IN denotes of
T8411 1240-1250 NN denotes activation
T8410 1232-1239 VB denotes delayed
T8409 1228-1231 DT denotes the
T8408 1224-1227 IN denotes for
T8407 1219-1223 NN denotes role
T8406 1209-1218 JJ denotes important
T8405 1206-1208 DT denotes an
T8404 1203-1205 IN denotes of
T8403 1192-1202 JJ denotes supportive
T8402 1183-1191 RB denotes strongly
T8401 1179-1182 VB denotes are
T8400 1175-1178 CC denotes and
T8399 1163-1174 NN denotes necroptosis
T8398 1155-1162 VB denotes promote
T8397 1152-1154 TO denotes to
T8396 1139-1151 JJ denotes insufficient
T8395 1136-1138 VB denotes is
T8394 1125-1135 NN denotes activation
T8393 1121-1124 NN denotes Akt
T8392 1115-1120 JJ denotes early
T8391 1110-1114 IN denotes that
T8390 1101-1109 VB denotes indicate
T8389 1099-1100 -COMMA- denotes ,
T8388 1088-1099 JJ denotes correlative
T8387 1082-1087 IN denotes while
T8386 1080-1081 -COMMA- denotes ,
T8385 1076-1080 NN denotes data
T8384 1070-1075 DT denotes these
T8383 1068-1069 -COMMA- denotes ,
T8382 1061-1068 RB denotes Overall
T8381 1058-1059 -RRB- denotes )
T8380 1056-1058 NN denotes 4E
T8379 1051-1055 NN denotes Fig.
T8378 1050-1051 -LRB- denotes (
T8377 1038-1049 NN denotes necroptosis
T8376 1028-1037 VB denotes prevented
T8375 1022-1027 RB denotes fully
T8374 1013-1021 NN denotes PD173074
T8373 1010-1012 IN denotes of
T8372 1001-1009 NN denotes addition
T8371 993-1000 VB denotes delayed
T8370 989-992 CC denotes and
T8369 976-988 NN denotes pre-addition
T8368 971-975 CC denotes Both
T8367 968-969 -RRB- denotes )
T8366 966-968 NN denotes 4D
T8365 961-965 NN denotes Fig.
T8364 960-961 -LRB- denotes (
T8363 951-959 NN denotes increase
T8362 941-950 JJ denotes secondary
T8361 937-940 DT denotes the
T8360 928-936 VB denotes suppress
T8359 925-927 TO denotes to
T8358 921-924 CC denotes but
T8357 919-920 -COMMA- denotes ,
T8356 909-919 NN denotes activation
T8355 905-908 NN denotes Akt
T8354 899-904 JJ denotes early
T8353 892-898 VB denotes retain
T8352 889-891 TO denotes to
T8351 886-888 PRP denotes us
T8350 878-885 VB denotes allowed
T8349 873-877 DT denotes This
T8348 863-871 NN denotes PD173074
T8347 860-862 IN denotes of
T8346 851-859 NN denotes addition
T8345 847-850 DT denotes the
T8344 844-846 IN denotes by
T8343 839-843 NN denotes bFGF
T8342 836-838 IN denotes of
T8341 827-835 NN denotes addition
T8340 821-826 IN denotes after
T8339 816-820 NN denotes hour
T8338 812-815 CD denotes one
T8337 805-811 NN denotes signal
T8336 800-804 NN denotes bFGF
T8335 796-799 DT denotes the
T8334 785-795 VB denotes terminated
T8333 782-784 PRP denotes we
T8332 780-781 -COMMA- denotes ,
T8331 773-780 RB denotes Finally
T8330 756-771 NN denotes phosphorylation
T8243 267-270 NN denotes Akt
T8242 261-266 JJ denotes rapid
T8241 259-260 -COMMA- denotes ,
T8240 252-259 JJ denotes initial
T8239 248-251 DT denotes the
T8238 243-247 RB denotes only
T8237 233-242 VB denotes triggered
T8236 231-232 -COMMA- denotes ,
T8235 230-231 -RRB- denotes )
T8234 228-230 NN denotes 2A
T8233 223-227 NN denotes Fig.
T8232 222-223 -LRB- denotes (
T8231 210-221 NN denotes necroptosis
T8230 203-209 VB denotes induce
T8229 199-202 RB denotes not
T8228 196-199 MD denotes can
T8227 190-195 WDT denotes which
T8226 188-189 -COMMA- denotes ,
T8225 175-188 NN denotes PDGF/zVAD.fmk
T8224 173-174 -COMMA- denotes ,
T8223 166-173 RB denotes Firstly
T8222 159-164 NN denotes death
T8221 154-158 NN denotes cell
T8220 142-153 JJ denotes necroptotic
T8219 139-141 IN denotes of
T8218 129-138 NN denotes execution
T8217 125-128 DT denotes the
T8216 122-124 TO denotes to
T8215 110-121 VB denotes contributes
T8214 97-109 RB denotes functionally
T8213 81-96 NN denotes phosphorylation
T8212 74-80 NN denotes Thr308
T8211 70-73 NN denotes Akt
T8210 67-69 IN denotes in
T8209 58-66 NN denotes increase
T8208 41-57 JJ denotes kinase-dependent
T8207 36-40 NN denotes RIP1
T8206 28-35 VB denotes delayed
T8205 24-27 DT denotes the
T8204 21-23 IN denotes if
T8203 8-20 VB denotes investigated
T8202 3-7 RB denotes next
T8201 0-2 PRP denotes We
T8329 749-755 NN denotes Thr308
T8328 745-748 NN denotes Akt
T8327 735-744 JJ denotes secondary
T8326 731-734 DT denotes the
T8325 728-730 IN denotes of
T8324 721-727 NN denotes timing
T8323 717-720 DT denotes the
T8322 712-716 IN denotes with
T8321 702-711 NN denotes coincides
T8320 696-701 NN denotes frame
T8319 691-695 NN denotes time
T8318 686-690 DT denotes This
T8317 683-684 -RRB- denotes )
T8316 682-683 NN denotes C
T8315 681-682 -COMMA- denotes ,
T8314 679-681 NN denotes 4B
T8313 674-678 NNP denotes Fig.
T8312 673-674 -LRB- denotes (
T8311 669-672 NN denotes hrs
T8310 667-668 CD denotes 9
T8309 664-666 IN denotes at
T8308 658-663 VB denotes added
T8307 654-657 VB denotes was
T8306 644-653 NN denotes inhibitor
T8305 640-643 DT denotes the
T8304 635-639 WRB denotes when
T8303 626-634 VB denotes observed
T8302 622-625 VB denotes was
T8301 611-621 NN denotes protection
T8300 608-610 DT denotes no
T8299 604-607 CC denotes and
T8298 590-603 NN denotes bFGF/zVAD.fmk
T8297 587-589 CC denotes or
T8296 582-586 NN denotes TNFα
T8295 580-581 -COMMA- denotes ,
T8294 572-580 NN denotes zVAD.fmk
T8293 567-571 IN denotes with
T8292 555-566 NN denotes stimulation
T8291 552-554 IN denotes of
T8290 548-551 NN denotes hrs
T8289 546-547 CD denotes 6
T8288 540-545 IN denotes after
T8287 531-539 VB denotes declined
T8286 523-530 RB denotes rapidly
T8285 511-522 NN denotes necroptosis
T8284 506-510 IN denotes from
T8283 500-505 NN denotes cells
T8282 492-499 VB denotes protect
T8281 489-491 TO denotes to
T8280 479-488 NN denotes inhibitor
T8279 475-478 NN denotes Akt
T8278 471-474 DT denotes the
T8277 468-470 IN denotes of
T8276 460-467 NN denotes ability
T8275 456-459 DT denotes the
T8274 451-455 IN denotes that
T8273 447-450 VB denotes saw
T8272 444-446 PRP denotes we
T8271 442-443 -COMMA- denotes ,
T8270 434-442 RB denotes Secondly
T8269 421-432 NN denotes necroptosis
T8268 416-420 IN denotes with
T8267 405-415 VB denotes correlates
T8266 389-404 NN denotes phosphorylation
T8265 385-388 NN denotes Akt
T8264 379-384 JJ denotes early
T8263 374-378 IN denotes than
T8262 367-373 RB denotes rather
T8261 365-366 -COMMA- denotes ,
T8260 361-365 JJ denotes late
T8259 356-360 IN denotes that
T8258 345-355 VB denotes indicating
T8257 343-344 -COMMA- denotes ,
T8256 342-343 -RRB- denotes )
T8255 340-342 NN denotes 4A
T8254 335-339 NN denotes Fig.
T8253 334-335 -LRB- denotes (
T8252 323-333 NN denotes activation
T8251 315-322 VB denotes delayed
T8250 311-314 DT denotes the
T8249 307-310 RB denotes not
T8248 303-306 CC denotes and
T8247 295-302 NN denotes changes
T8246 279-294 NN denotes phosphorylation
T8245 275-278 NN denotes JNK
T8244 271-274 CC denotes and
R5272 T8201 T8203 arg2Of We,investigated
R5273 T8203 T8202 arg1Of investigated,next
R5274 T8203 T8204 arg1Of investigated,if
R5275 T8209 T8205 arg1Of increase,the
R5276 T8209 T8206 arg2Of increase,delayed
R5277 T8209 T8207 arg1Of increase,RIP1
R5278 T8209 T8208 arg1Of increase,kinase-dependent
R5279 T8209 T8210 arg1Of increase,in
R5280 T8209 T8215 arg1Of increase,contributes
R5281 T8213 T8210 arg2Of phosphorylation,in
R5282 T8213 T8211 arg1Of phosphorylation,Akt
R5283 T8213 T8212 arg1Of phosphorylation,Thr308
R5284 T8215 T8204 arg2Of contributes,if
R5285 T8215 T8214 arg1Of contributes,functionally
R5286 T8215 T8216 arg1Of contributes,to
R5287 T8218 T8216 arg2Of execution,to
R5288 T8218 T8217 arg1Of execution,the
R5289 T8218 T8219 arg1Of execution,of
R5290 T8222 T8219 arg2Of death,of
R5291 T8222 T8220 arg1Of death,necroptotic
R5292 T8222 T8221 arg1Of death,cell
R5293 T8225 T8226 arg1Of PDGF/zVAD.fmk,","
R5294 T8225 T8227 arg1Of PDGF/zVAD.fmk,which
R5295 T8225 T8228 arg1Of PDGF/zVAD.fmk,can
R5296 T8225 T8230 arg1Of PDGF/zVAD.fmk,induce
R5297 T8225 T8237 arg1Of PDGF/zVAD.fmk,triggered
R5298 T8230 T8228 arg2Of induce,can
R5299 T8230 T8229 arg1Of induce,not
R5300 T8231 T8230 arg2Of necroptosis,induce
R5301 T8231 T8232 arg1Of necroptosis,(
R5302 T8234 T8232 arg2Of 2A,(
R5303 T8234 T8233 arg1Of 2A,Fig.
R5304 T8235 T8232 arg3Of ),(
R5305 T8237 T8223 arg1Of triggered,Firstly
R5306 T8237 T8224 arg1Of triggered,","
R5307 T8237 T8236 arg1Of triggered,","
R5308 T8237 T8257 arg1Of triggered,","
R5309 T8237 T8258 modOf triggered,indicating
R5310 T8240 T8241 arg1Of initial,","
R5311 T8242 T8241 arg2Of rapid,","
R5312 T8243 T8240 arg1Of Akt,initial
R5313 T8243 T8242 arg1Of Akt,rapid
R5314 T8243 T8244 arg1Of Akt,and
R5315 T8244 T8238 arg1Of and,only
R5316 T8244 T8239 arg1Of and,the
R5317 T8244 T8248 arg1Of and,and
R5318 T8247 T8244 arg2Of changes,and
R5319 T8247 T8245 arg1Of changes,JNK
R5320 T8247 T8246 arg1Of changes,phosphorylation
R5321 T8248 T8237 arg2Of and,triggered
R5322 T8252 T8248 arg2Of activation,and
R5323 T8252 T8249 arg1Of activation,not
R5324 T8252 T8250 arg1Of activation,the
R5325 T8252 T8251 arg2Of activation,delayed
R5326 T8252 T8253 arg1Of activation,(
R5327 T8255 T8253 arg2Of 4A,(
R5328 T8255 T8254 arg1Of 4A,Fig.
R5329 T8256 T8253 arg3Of ),(
R5330 T8260 T8263 arg1Of late,than
R5331 T8263 T8261 arg1Of than,","
R5332 T8263 T8262 arg1Of than,rather
R5333 T8264 T8263 arg2Of early,than
R5334 T8266 T8260 arg1Of phosphorylation,late
R5335 T8266 T8264 arg1Of phosphorylation,early
R5336 T8266 T8265 arg1Of phosphorylation,Akt
R5337 T8266 T8267 arg1Of phosphorylation,correlates
R5338 T8267 T8258 arg2Of correlates,indicating
R5339 T8267 T8259 arg1Of correlates,that
R5340 T8267 T8268 arg1Of correlates,with
R5341 T8269 T8268 arg2Of necroptosis,with
R5342 T8272 T8273 arg1Of we,saw
R5343 T8273 T8270 arg1Of saw,Secondly
R5344 T8273 T8271 arg1Of saw,","
R5345 T8276 T8275 arg1Of ability,the
R5346 T8276 T8277 arg1Of ability,of
R5347 T8276 T8281 modOf ability,to
R5348 T8276 T8287 arg1Of ability,declined
R5349 T8280 T8277 arg2Of inhibitor,of
R5350 T8280 T8278 arg1Of inhibitor,the
R5351 T8280 T8279 arg1Of inhibitor,Akt
R5352 T8282 T8281 arg1Of protect,to
R5353 T8282 T8284 arg1Of protect,from
R5354 T8283 T8282 arg2Of cells,protect
R5355 T8285 T8284 arg2Of necroptosis,from
R5356 T8287 T8286 arg1Of declined,rapidly
R5357 T8287 T8288 arg1Of declined,after
R5358 T8287 T8299 arg1Of declined,and
R5359 T8290 T8288 arg2Of hrs,after
R5360 T8290 T8289 arg1Of hrs,6
R5361 T8290 T8291 arg1Of hrs,of
R5362 T8290 T8293 arg1Of hrs,with
R5363 T8292 T8291 arg2Of stimulation,of
R5364 T8294 T8295 arg1Of zVAD.fmk,","
R5365 T8295 T8297 arg1Of ",",or
R5366 T8296 T8295 arg2Of TNFα,","
R5367 T8297 T8293 arg2Of or,with
R5368 T8298 T8297 arg2Of bFGF/zVAD.fmk,or
R5369 T8299 T8273 arg2Of and,saw
R5370 T8299 T8274 arg1Of and,that
R5371 T8299 T8312 arg1Of and,(
R5372 T8301 T8300 arg1Of protection,no
R5373 T8301 T8302 arg1Of protection,was
R5374 T8301 T8303 arg2Of protection,observed
R5375 T8303 T8299 arg2Of observed,and
R5376 T8303 T8302 arg2Of observed,was
R5377 T8303 T8304 arg1Of observed,when
R5378 T8306 T8305 arg1Of inhibitor,the
R5379 T8306 T8307 arg1Of inhibitor,was
R5380 T8306 T8308 arg2Of inhibitor,added
R5381 T8308 T8304 arg2Of added,when
R5382 T8308 T8307 arg2Of added,was
R5383 T8308 T8309 arg1Of added,at
R5384 T8311 T8309 arg2Of hrs,at
R5385 T8311 T8310 arg1Of hrs,9
R5386 T8314 T8312 arg2Of 4B,(
R5387 T8314 T8313 arg1Of 4B,Fig.
R5388 T8314 T8315 arg1Of 4B,","
R5389 T8316 T8315 arg2Of C,","
R5390 T8317 T8312 arg3Of ),(
R5391 T8321 T8318 arg1Of coincides,This
R5392 T8321 T8319 arg1Of coincides,time
R5393 T8321 T8320 arg1Of coincides,frame
R5394 T8321 T8322 arg1Of coincides,with
R5395 T8324 T8322 arg2Of timing,with
R5396 T8324 T8323 arg1Of timing,the
R5397 T8324 T8325 arg1Of timing,of
R5398 T8330 T8325 arg2Of phosphorylation,of
R5399 T8330 T8326 arg1Of phosphorylation,the
R5400 T8330 T8327 arg1Of phosphorylation,secondary
R5401 T8330 T8328 arg1Of phosphorylation,Akt
R5402 T8330 T8329 arg1Of phosphorylation,Thr308
R5403 T8333 T8334 arg1Of we,terminated
R5404 T8334 T8331 arg1Of terminated,Finally
R5405 T8334 T8332 arg1Of terminated,","
R5406 T8334 T8340 arg1Of terminated,after
R5407 T8334 T8344 arg1Of terminated,by
R5408 T8339 T8334 arg2Of hour,terminated
R5409 T8339 T8335 arg1Of hour,the
R5410 T8339 T8336 arg1Of hour,bFGF
R5411 T8339 T8337 arg1Of hour,signal
R5412 T8339 T8338 arg1Of hour,one
R5413 T8341 T8340 arg2Of addition,after
R5414 T8341 T8342 arg1Of addition,of
R5415 T8343 T8342 arg2Of bFGF,of
R5416 T8346 T8344 arg2Of addition,by
R5417 T8346 T8345 arg1Of addition,the
R5418 T8346 T8347 arg1Of addition,of
R5419 T8348 T8347 arg2Of PD173074,of
R5420 T8349 T8350 arg1Of This,allowed
R5421 T8351 T8350 arg2Of us,allowed
R5422 T8351 T8353 arg1Of us,retain
R5423 T8351 T8360 arg1Of us,suppress
R5424 T8353 T8352 arg1Of retain,to
R5425 T8353 T8358 arg1Of retain,but
R5426 T8356 T8353 arg2Of activation,retain
R5427 T8356 T8354 arg1Of activation,early
R5428 T8356 T8355 arg1Of activation,Akt
R5429 T8358 T8350 arg3Of but,allowed
R5430 T8358 T8357 arg1Of but,","
R5431 T8360 T8358 arg2Of suppress,but
R5432 T8360 T8359 arg1Of suppress,to
R5433 T8363 T8360 arg2Of increase,suppress
R5434 T8363 T8361 arg1Of increase,the
R5435 T8363 T8362 arg1Of increase,secondary
R5436 T8363 T8364 arg1Of increase,(
R5437 T8366 T8364 arg2Of 4D,(
R5438 T8366 T8365 arg1Of 4D,Fig.
R5439 T8367 T8364 arg3Of ),(
R5440 T8369 T8370 arg1Of pre-addition,and
R5441 T8370 T8368 arg1Of and,Both
R5442 T8370 T8376 arg1Of and,prevented
R5443 T8372 T8370 arg2Of addition,and
R5444 T8372 T8371 arg2Of addition,delayed
R5445 T8372 T8373 arg1Of addition,of
R5446 T8374 T8373 arg2Of PD173074,of
R5447 T8376 T8375 arg1Of prevented,fully
R5448 T8377 T8376 arg2Of necroptosis,prevented
R5449 T8377 T8378 arg1Of necroptosis,(
R5450 T8380 T8378 arg2Of 4E,(
R5451 T8380 T8379 arg1Of 4E,Fig.
R5452 T8381 T8378 arg3Of ),(
R5453 T8385 T8384 arg1Of data,these
R5454 T8385 T8390 arg1Of data,indicate
R5455 T8388 T8387 arg2Of correlative,while
R5456 T8390 T8382 arg1Of indicate,Overall
R5457 T8390 T8383 arg1Of indicate,","
R5458 T8390 T8386 arg1Of indicate,","
R5459 T8390 T8387 arg1Of indicate,while
R5460 T8390 T8389 arg1Of indicate,","
R5461 T8394 T8392 arg1Of activation,early
R5462 T8394 T8393 arg1Of activation,Akt
R5463 T8394 T8395 arg1Of activation,is
R5464 T8394 T8396 arg1Of activation,insufficient
R5465 T8395 T8390 arg2Of is,indicate
R5466 T8395 T8391 arg1Of is,that
R5467 T8396 T8395 arg2Of insufficient,is
R5468 T8398 T8400 arg1Of promote,and
R5469 T8399 T8398 arg2Of necroptosis,promote
R5470 T8400 T8396 arg2Of and,insufficient
R5471 T8400 T8397 arg1Of and,to
R5472 T8401 T8400 arg2Of are,and
R5473 T8403 T8401 arg2Of supportive,are
R5474 T8403 T8402 arg1Of supportive,strongly
R5475 T8403 T8404 arg1Of supportive,of
R5476 T8407 T8404 arg2Of role,of
R5477 T8407 T8405 arg1Of role,an
R5478 T8407 T8406 arg1Of role,important
R5479 T8407 T8408 arg1Of role,for
R5480 T8411 T8408 arg2Of activation,for
R5481 T8411 T8409 arg1Of activation,the
R5482 T8411 T8410 arg2Of activation,delayed
R5483 T8411 T8412 arg1Of activation,of
R5484 T8411 T8414 arg1Of activation,in
R5485 T8413 T8412 arg2Of Akt,of
R5486 T8416 T8414 arg2Of induction,in
R5487 T8416 T8415 arg1Of induction,the
R5488 T8416 T8417 arg1Of induction,of
R5489 T8420 T8417 arg2Of death,of
R5490 T8420 T8418 arg1Of death,necroptotic
R5491 T8420 T8419 arg1Of death,cell

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T8153 839-843 Protein denotes bFGF
T8152 800-804 Protein denotes bFGF
T8151 590-594 Protein denotes bFGF
T8150 582-586 Protein denotes TNFα
T8149 36-40 Protein denotes RIP1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T8463 839-843 http://www.uniprot.org/uniprot/Q788Q8 denotes bFGF
T8462 800-804 http://www.uniprot.org/uniprot/Q788Q8 denotes bFGF
T8461 590-594 http://www.uniprot.org/uniprot/Q788Q8 denotes bFGF
T8460 582-586 http://www.uniprot.org/uniprot/P01375 denotes TNFα
T8459 36-40 http://www.uniprot.org/uniprot/Q13546 denotes RIP1
T8458 1254-1257 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T8457 1121-1124 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T8456 905-908 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T8455 745-748 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T8454 475-478 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T8453 385-388 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T8452 267-270 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T8451 70-73 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T8449 1254-1257 http://www.uniprot.org/uniprot/P31751 denotes Akt
T8448 1121-1124 http://www.uniprot.org/uniprot/P31751 denotes Akt
T8447 905-908 http://www.uniprot.org/uniprot/P31751 denotes Akt
T8446 745-748 http://www.uniprot.org/uniprot/P31751 denotes Akt
T8445 475-478 http://www.uniprot.org/uniprot/P31751 denotes Akt
T8444 385-388 http://www.uniprot.org/uniprot/P31751 denotes Akt
T8443 267-270 http://www.uniprot.org/uniprot/P31751 denotes Akt
T8442 70-73 http://www.uniprot.org/uniprot/P31751 denotes Akt
T8440 1254-1257 http://www.uniprot.org/uniprot/P31749 denotes Akt
T8439 1121-1124 http://www.uniprot.org/uniprot/P31749 denotes Akt
T8438 905-908 http://www.uniprot.org/uniprot/P31749 denotes Akt
T8437 745-748 http://www.uniprot.org/uniprot/P31749 denotes Akt
T8436 475-478 http://www.uniprot.org/uniprot/P31749 denotes Akt
T8435 385-388 http://www.uniprot.org/uniprot/P31749 denotes Akt
T8434 267-270 http://www.uniprot.org/uniprot/P31749 denotes Akt
T8433 70-73 http://www.uniprot.org/uniprot/P31749 denotes Akt

GO-BP

Id Subject Object Predicate Lexical cue
T8176 805-811 http://purl.obolibrary.org/obo/GO_0023052 denotes signal
T8175 275-278 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK
T8174 1163-1174 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T8173 1038-1049 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T8172 511-522 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T8171 421-432 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T8170 210-221 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T8169 1163-1174 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis
T8168 1038-1049 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis
T8167 511-522 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis
T8166 421-432 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis
T8165 210-221 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis
T8164 1295-1300 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T8163 159-164 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T8161 1290-1300 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death
T8160 154-164 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death
T8158 756-771 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T8157 389-404 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T8156 279-294 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T8155 81-96 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

GO-MF

Id Subject Object Predicate Lexical cue
T8177 175-179 http://purl.obolibrary.org/obo/GO_0005161 denotes PDGF
T8178 275-278 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK

GO-CC

Id Subject Object Predicate Lexical cue
T8181 1290-1294 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T8180 154-158 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T8142 1061-1301 Sentence denotes Overall, these data, while correlative, indicate that early Akt activation is insufficient to promote necroptosis and are strongly supportive of an important role for the delayed activation of Akt in the induction of necroptotic cell death.
T8141 971-1060 Sentence denotes Both pre-addition and delayed addition of PD173074 fully prevented necroptosis (Fig. 4E).
T8140 873-970 Sentence denotes This allowed us to retain early Akt activation, but to suppress the secondary increase (Fig. 4D).
T8139 773-872 Sentence denotes Finally, we terminated the bFGF signal one hour after addition of bFGF by the addition of PD173074.
T8138 686-772 Sentence denotes This time frame coincides with the timing of the secondary Akt Thr308 phosphorylation.
T8137 434-685 Sentence denotes Secondly, we saw that the ability of the Akt inhibitor to protect cells from necroptosis rapidly declined after 6 hrs of stimulation with zVAD.fmk, TNFα or bFGF/zVAD.fmk and no protection was observed when the inhibitor was added at 9 hrs (Fig. 4B,C).
T8136 166-433 Sentence denotes Firstly, PDGF/zVAD.fmk, which cannot induce necroptosis (Fig. 2A), triggered only the initial, rapid Akt and JNK phosphorylation changes and not the delayed activation (Fig. 4A), indicating that late, rather than early Akt phosphorylation correlates with necroptosis.
T8135 0-165 Sentence denotes We next investigated if the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation functionally contributes to the execution of necroptotic cell death.
T110 0-165 Sentence denotes We next investigated if the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation functionally contributes to the execution of necroptotic cell death.
T111 166-433 Sentence denotes Firstly, PDGF/zVAD.fmk, which cannot induce necroptosis (Fig. 2A), triggered only the initial, rapid Akt and JNK phosphorylation changes and not the delayed activation (Fig. 4A), indicating that late, rather than early Akt phosphorylation correlates with necroptosis.
T112 434-685 Sentence denotes Secondly, we saw that the ability of the Akt inhibitor to protect cells from necroptosis rapidly declined after 6 hrs of stimulation with zVAD.fmk, TNFα or bFGF/zVAD.fmk and no protection was observed when the inhibitor was added at 9 hrs (Fig. 4B,C).
T113 686-772 Sentence denotes This time frame coincides with the timing of the secondary Akt Thr308 phosphorylation.
T114 773-872 Sentence denotes Finally, we terminated the bFGF signal one hour after addition of bFGF by the addition of PD173074.
T115 873-970 Sentence denotes This allowed us to retain early Akt activation, but to suppress the secondary increase (Fig. 4D).
T116 971-1060 Sentence denotes Both pre-addition and delayed addition of PD173074 fully prevented necroptosis (Fig. 4E).
T117 1061-1301 Sentence denotes Overall, these data, while correlative, indicate that early Akt activation is insufficient to promote necroptosis and are strongly supportive of an important role for the delayed activation of Akt in the induction of necroptotic cell death.

simple1

Id Subject Object Predicate Lexical cue
T8186 839-843 Protein denotes bFGF
T8185 800-804 Protein denotes bFGF
T8184 590-594 Protein denotes bFGF
T8183 582-586 Protein denotes TNFα
T8182 36-40 Protein denotes RIP1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T8431 58-66 Positive_regulation denotes increase
T8430 839-843 Protein denotes bFGF
T8429 800-804 Protein denotes bFGF
T8428 590-594 Protein denotes bFGF
T8427 582-586 Protein denotes TNFα
T8426 36-40 Protein denotes RIP1
R5493 T8426 T8431 themeOf RIP1,increase

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T8734 58-66 Positive_regulation denotes increase
T8733 41-57 Regulation denotes kinase-dependent
T8732 110-121 Positive_regulation denotes contributes
T8731 839-843 Protein denotes bFGF
T8730 800-804 Protein denotes bFGF
T8729 590-594 Protein denotes bFGF
T8728 582-586 Protein denotes TNFα
T8727 36-40 Protein denotes RIP1
R5748 T8727 T8734 themeOf RIP1,increase
R5749 T8734 T8732 themeOf increase,contributes
R5750 T8734 T8733 themeOf increase,kinase-dependent

DLUT931

Id Subject Object Predicate Lexical cue
T8713 572-580 Positive_regulation denotes zVAD.fmk
T8712 41-57 Positive_regulation denotes kinase-dependent
T8711 28-35 Positive_regulation denotes delayed
T8710 110-121 Positive_regulation denotes contributes
T8709 58-66 Positive_regulation denotes increase
T8708 839-843 Protein denotes bFGF
T8707 800-804 Protein denotes bFGF
T8706 590-594 Protein denotes bFGF
T8705 582-586 Protein denotes TNFα
T8704 36-40 Protein denotes RIP1
R5728 T8704 T8709 themeOf RIP1,increase
R5729 T8705 T8713 themeOf TNFα,zVAD.fmk
R5730 T8706 T8713 themeOf bFGF,zVAD.fmk
R5731 T8709 T8710 themeOf increase,contributes
R5732 T8709 T8711 themeOf increase,delayed
R5733 T8709 T8712 themeOf increase,kinase-dependent
R5734 T8711 T8709 themeOf delayed,increase

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T8820 572-580 Entity denotes zVAD.fmk
T8819 860-871 Entity denotes of PD173074
T8818 36-40 Protein denotes RIP1
T8817 582-586 Protein denotes TNFα
T8816 1121-1124 Protein denotes Akt
T8815 385-432 Protein denotes Akt phosphorylation correlates with necroptosis
T8814 745-748 Protein denotes Akt
T8813 1010-1021 Entity denotes of PD173074
T8812 640-653 Entity denotes the inhibitor
T8811 836-843 Protein denotes of bFGF
T8810 731-755 Entity denotes the secondary Akt Thr308
T8809 1251-1257 Protein denotes of Akt
T8808 500-505 Entity denotes cells
T8807 468-488 Entity denotes of the Akt inhibitor
T8806 590-594 Protein denotes bFGF
T8805 905-908 Protein denotes Akt
T8804 796-804 Protein denotes the bFGF
T8803 667-672 Protein denotes 9 hrs
T8802 70-73 Protein denotes Akt
T8801 674-677 Protein denotes Fig
T8800 595-603 Entity denotes zVAD.fmk
T8799 248-270 Protein denotes the initial, rapid Akt
T8797 70-80 Entity denotes Akt Thr308
T8796 275-278 Protein denotes JNK
T8795 475-478 Protein denotes Akt
T8794 36-57 Protein denotes RIP1 kinase-dependent
T8835 971-1021 Negative_regulation denotes Both pre-addition and delayed addition of PD173074
T8834 925-969 Negative_regulation denotes to suppress the secondary increase (Fig. 4D)
T8833 1228-1300 Negative_regulation denotes the delayed activation of Akt in the induction of necroptotic cell death
T8832 905-919 Positive_regulation denotes Akt activation
T8831 67-96 Phosphorylation denotes in Akt Thr308 phosphorylation
T8830 24-96 Regulation denotes the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation
T8829 1228-1300 Positive_regulation denotes the delayed activation of Akt in the induction of necroptotic cell death
T8828 731-771 Phosphorylation denotes the secondary Akt Thr308 phosphorylation
T8826 1121-1135 Positive_regulation denotes Akt activation
T8825 24-96 Positive_regulation denotes the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation
T8824 311-343 Negative_regulation denotes the delayed activation (Fig. 4A)
T8823 275-302 Phosphorylation denotes JNK phosphorylation changes
T8822 24-96 Negative_regulation denotes the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation
T8821 546-566 Protein denotes 6 hrs of stimulation
R5782 T8794 T8830 causeOf RIP1 kinase-dependent,the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation
R5783 T8796 T8823 themeOf JNK,JNK phosphorylation changes
R5784 T8797 T8802 partOf Akt Thr308,Akt
R5785 T8797 T8831 siteOf Akt Thr308,in Akt Thr308 phosphorylation
R5788 T8802 T8831 themeOf Akt,in Akt Thr308 phosphorylation
R5789 T8805 T8832 themeOf Akt,Akt activation
R5790 T8809 T8829 themeOf of Akt,the delayed activation of Akt in the induction of necroptotic cell death
R5791 T8810 T8814 partOf the secondary Akt Thr308,Akt
R5792 T8810 T8828 siteOf the secondary Akt Thr308,the secondary Akt Thr308 phosphorylation
R5793 T8814 T8828 themeOf Akt,the secondary Akt Thr308 phosphorylation
R5794 T8816 T8826 themeOf Akt,Akt activation
R5795 T8825 T8822 themeOf the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation,the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation
R5796 T8825 T8830 themeOf the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation,the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation
R5797 T8829 T8833 themeOf the delayed activation of Akt in the induction of necroptotic cell death,the delayed activation of Akt in the induction of necroptotic cell death
R5798 T8831 T8825 themeOf in Akt Thr308 phosphorylation,the delayed RIP1 kinase-dependent increase in Akt Thr308 phosphorylation

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T8726 1300-1301 . denotes .
T8725 1295-1300 NN denotes death
T8724 1290-1294 NN denotes cell
T8723 1278-1289 JJ denotes necroptotic
T8722 1275-1277 IN denotes of
T8703 1224-1227 IN denotes for
T8702 1219-1223 NN denotes role
T8701 1209-1218 JJ denotes important
T8700 1206-1208 DT denotes an
T8699 1203-1205 IN denotes of
T8698 1192-1202 JJ denotes supportive
T8697 1183-1191 RB denotes strongly
T8696 1179-1182 VBP denotes are
T8695 1175-1178 CC denotes and
T8694 1163-1174 NN denotes necroptosis
T8693 1155-1162 VB denotes promote
T8692 1152-1154 TO denotes to
T8691 1139-1151 JJ denotes insufficient
T8690 1136-1138 VBZ denotes is
T8689 1125-1135 NN denotes activation
T8688 1121-1124 NNP denotes Akt
T8687 1115-1120 JJ denotes early
T8686 1110-1114 IN denotes that
T8685 1101-1109 VBP denotes indicate
T8684 1099-1100 , denotes ,
T8638 851-859 NN denotes addition
T8637 847-850 DT denotes the
T8636 844-846 IN denotes by
T8635 839-843 NNP denotes bFGF
T8634 836-838 IN denotes of
T8633 827-835 NN denotes addition
T8632 821-826 IN denotes after
T8631 816-820 NN denotes hour
T8630 812-815 CD denotes one
T8629 805-811 NN denotes signal
T8628 800-804 NNP denotes bFGF
T8627 796-799 DT denotes the
T8626 785-795 VBD denotes terminated
T8625 782-784 PRP denotes we
T8624 780-781 , denotes ,
T8623 773-780 RB denotes Finally
T8622 771-772 . denotes .
T8621 756-771 NN denotes phosphorylation
T8620 749-755 NNP denotes Thr308
T8619 745-748 NNP denotes Akt
T8618 735-744 JJ denotes secondary
T8617 731-734 DT denotes the
T8616 728-730 IN denotes of
T8615 721-727 NN denotes timing
T8614 717-720 DT denotes the
T8613 712-716 IN denotes with
T8612 702-711 NNS denotes coincides
T8611 696-701 NN denotes frame
T8610 691-695 NN denotes time
T8609 686-690 DT denotes This
T8608 684-685 . denotes .
T8607 683-684 -RRB- denotes )
T8606 682-683 NNP denotes C
T8605 681-682 , denotes ,
T8534 335-339 NNP denotes Fig.
T8533 334-335 -LRB- denotes (
T8532 323-333 NN denotes activation
T8531 315-322 VBN denotes delayed
T8530 311-314 DT denotes the
T8529 307-310 RB denotes not
T8528 303-306 CC denotes and
T8527 295-302 NNS denotes changes
T8526 279-294 NN denotes phosphorylation
T8525 275-278 NNP denotes JNK
T8524 271-274 CC denotes and
T8523 267-270 NNP denotes Akt
T8522 261-266 JJ denotes rapid
T8521 259-260 , denotes ,
T8520 252-259 JJ denotes initial
T8519 248-251 DT denotes the
T8518 243-247 RB denotes only
T8517 233-242 VBD denotes triggered
T8516 231-232 , denotes ,
T8515 230-231 -RRB- denotes )
T8514 228-230 NNP denotes 2A
T8513 223-227 NNP denotes Fig.
T8512 222-223 -LRB- denotes (
T8511 210-221 NN denotes necroptosis
T8510 203-209 VB denotes induce
T8509 199-202 RB denotes not
T8508 196-199 MD denotes can
T8507 190-195 WDT denotes which
T8506 188-189 , denotes ,
T8505 185-188 NN denotes fmk
T8504 184-185 . denotes .
T8503 175-184 NNP denotes PDGF/zVAD
T8502 173-174 , denotes ,
T8604 679-681 NNP denotes 4B
T8603 674-678 NNP denotes Fig.
T8602 673-674 -LRB- denotes (
T8601 669-672 NNS denotes hrs
T8600 667-668 CD denotes 9
T8599 664-666 IN denotes at
T8598 658-663 VBN denotes added
T8597 654-657 VBD denotes was
T8596 644-653 NN denotes inhibitor
T8595 640-643 DT denotes the
T8594 635-639 WRB denotes when
T8593 626-634 VBN denotes observed
T8592 622-625 VBD denotes was
T8591 611-621 NN denotes protection
T8590 608-610 DT denotes no
T8589 604-607 CC denotes and
T8588 600-603 NN denotes fmk
T8587 599-600 . denotes .
T8586 590-599 NNP denotes bFGF/zVAD
T8585 587-589 CC denotes or
T8584 582-586 NNP denotes TNFα
T8583 580-581 , denotes ,
T8582 572-580 NNP denotes zVAD.fmk
T8581 567-571 IN denotes with
T8580 555-566 NN denotes stimulation
T8579 552-554 IN denotes of
T8578 548-551 NNS denotes hrs
T8577 546-547 CD denotes 6
T8576 540-545 IN denotes after
T8575 531-539 VBD denotes declined
T8574 523-530 RB denotes rapidly
T8573 511-522 NN denotes necroptosis
T8572 506-510 IN denotes from
T8571 500-505 NNS denotes cells
T8570 492-499 VB denotes protect
T8569 489-491 TO denotes to
T8568 479-488 NN denotes inhibitor
T8567 475-478 NNP denotes Akt
T8566 471-474 DT denotes the
T8565 468-470 IN denotes of
T8564 460-467 NN denotes ability
T8563 456-459 DT denotes the
T8562 451-455 IN denotes that
T8561 447-450 VBD denotes saw
T8560 444-446 PRP denotes we
T8559 442-443 , denotes ,
T8558 434-442 RB denotes Secondly
T8557 432-433 . denotes .
T8556 421-432 NN denotes necroptosis
T8555 416-420 IN denotes with
T8554 405-415 VBZ denotes correlates
T8553 389-404 NN denotes phosphorylation
T8552 385-388 NNP denotes Akt
T8487 67-69 IN denotes in
T8501 166-173 RB denotes Firstly
T8500 164-165 . denotes .
T8499 159-164 NN denotes death
T8498 154-158 NN denotes cell
T8497 142-153 JJ denotes necroptotic
T8496 139-141 IN denotes of
T8495 129-138 NN denotes execution
T8494 125-128 DT denotes the
T8493 122-124 TO denotes to
T8492 110-121 VBZ denotes contributes
T8491 97-109 RB denotes functionally
T8490 81-96 NN denotes phosphorylation
T8489 74-80 NNP denotes Thr308
T8488 70-73 NNP denotes Akt
T8486 58-66 NN denotes increase
T8485 41-57 JJ denotes kinase-dependent
T8484 36-40 NNP denotes RIP1
T8483 28-35 VBN denotes delayed
T8482 24-27 DT denotes the
T8481 21-23 IN denotes if
T8480 8-20 VBN denotes investigated
T8479 3-7 JJ denotes next
T8478 0-2 PRP denotes We
T8545 345-355 VBG denotes indicating
T8544 343-344 , denotes ,
T8543 342-343 -RRB- denotes )
T8542 340-342 NNP denotes 4A
T8546 356-360 IN denotes that
T8551 379-384 JJ denotes early
T8550 374-378 IN denotes than
T8549 367-373 RB denotes rather
T8548 365-366 , denotes ,
T8547 361-365 RB denotes late
T8643 878-885 VBD denotes allowed
T8642 873-877 DT denotes This
T8641 871-872 . denotes .
T8640 863-871 NNP denotes PD173074
T8639 860-862 IN denotes of
T8683 1088-1099 JJ denotes correlative
T8682 1082-1087 IN denotes while
T8681 1080-1081 , denotes ,
T8680 1076-1080 NNS denotes data
T8679 1070-1075 DT denotes these
T8678 1068-1069 , denotes ,
T8677 1061-1068 RB denotes Overall
T8676 1059-1060 . denotes .
T8675 1058-1059 -RRB- denotes )
T8674 1056-1058 NNP denotes 4E
T8673 1051-1055 NNP denotes Fig.
T8672 1050-1051 -LRB- denotes (
T8671 1038-1049 NN denotes necroptosis
T8670 1028-1037 VBD denotes prevented
T8669 1022-1027 RB denotes fully
T8668 1013-1021 NNP denotes PD173074
T8667 1010-1012 IN denotes of
T8666 1001-1009 NN denotes addition
T8665 993-1000 JJ denotes delayed
T8664 989-992 CC denotes and
T8663 976-988 JJ denotes pre-addition
T8662 971-975 DT denotes Both
T8661 969-970 . denotes .
T8660 968-969 -RRB- denotes )
T8659 966-968 NNP denotes 4D
T8658 961-965 NNP denotes Fig.
T8657 960-961 -LRB- denotes (
T8656 951-959 NN denotes increase
T8655 941-950 JJ denotes secondary
T8654 937-940 DT denotes the
T8653 928-936 VB denotes suppress
T8652 925-927 TO denotes to
T8651 921-924 CC denotes but
T8650 919-920 , denotes ,
T8649 909-919 NN denotes activation
T8648 905-908 NNP denotes Akt
T8647 899-904 JJ denotes early
T8646 892-898 VB denotes retain
T8645 889-891 TO denotes to
T8644 886-888 PRP denotes us
T8721 1265-1274 NN denotes induction
T8720 1261-1264 DT denotes the
T8719 1258-1260 IN denotes in
T8718 1254-1257 NNP denotes Akt
T8717 1251-1253 IN denotes of
T8716 1240-1250 NN denotes activation
T8715 1232-1239 VBN denotes delayed
T8714 1228-1231 DT denotes the
R5508 T8478 T8480 nsubj We,investigated
R5509 T8479 T8480 advmod next,investigated
R5510 T8480 T8480 ROOT investigated,investigated
R5511 T8481 T8492 mark if,contributes
R5512 T8482 T8486 det the,increase
R5513 T8483 T8486 amod delayed,increase
R5514 T8484 T8486 nmod RIP1,increase
R5515 T8485 T8486 amod kinase-dependent,increase
R5516 T8486 T8492 nsubj increase,contributes
R5517 T8487 T8486 prep in,increase
R5518 T8488 T8490 compound Akt,phosphorylation
R5519 T8489 T8490 compound Thr308,phosphorylation
R5520 T8490 T8486 appos phosphorylation,increase
R5521 T8491 T8492 advmod functionally,contributes
R5522 T8492 T8480 advcl contributes,investigated
R5523 T8493 T8492 prep to,contributes
R5524 T8494 T8495 det the,execution
R5525 T8495 T8493 pobj execution,to
R5526 T8496 T8495 prep of,execution
R5527 T8497 T8499 amod necroptotic,death
R5528 T8498 T8499 compound cell,death
R5529 T8499 T8496 pobj death,of
R5530 T8500 T8480 punct .,investigated
R5531 T8501 T8501 ROOT Firstly,Firstly
R5532 T8502 T8501 punct ",",Firstly
R5533 T8503 T8501 appos PDGF/zVAD,Firstly
R5534 T8504 T8501 punct .,Firstly
R5535 T8505 T8517 nsubj fmk,triggered
R5536 T8506 T8505 punct ",",fmk
R5537 T8507 T8510 nsubj which,induce
R5538 T8508 T8510 aux can,induce
R5539 T8509 T8510 neg not,induce
R5540 T8510 T8505 relcl induce,fmk
R5541 T8511 T8510 dobj necroptosis,induce
R5542 T8512 T8514 punct (,2A
R5543 T8513 T8514 compound Fig.,2A
R5544 T8514 T8511 appos 2A,necroptosis
R5545 T8515 T8514 punct ),2A
R5546 T8516 T8517 punct ",",triggered
R5547 T8517 T8517 ROOT triggered,triggered
R5548 T8518 T8523 advmod only,Akt
R5549 T8519 T8523 det the,Akt
R5550 T8520 T8523 amod initial,Akt
R5551 T8521 T8523 punct ",",Akt
R5552 T8522 T8523 amod rapid,Akt
R5553 T8523 T8527 nmod Akt,changes
R5554 T8524 T8523 cc and,Akt
R5555 T8525 T8523 conj JNK,Akt
R5556 T8526 T8527 compound phosphorylation,changes
R5557 T8527 T8517 dobj changes,triggered
R5558 T8528 T8527 cc and,changes
R5559 T8529 T8532 neg not,activation
R5560 T8530 T8532 det the,activation
R5561 T8531 T8532 amod delayed,activation
R5562 T8532 T8527 conj activation,changes
R5563 T8533 T8532 punct (,activation
R5564 T8534 T8542 compound Fig.,4A
R5566 T8542 T8532 appos 4A,activation
R5567 T8543 T8532 punct ),activation
R5568 T8544 T8517 punct ",",triggered
R5569 T8545 T8517 advcl indicating,triggered
R5570 T8546 T8554 mark that,correlates
R5571 T8547 T8554 advmod late,correlates
R5572 T8548 T8547 punct ",",late
R5573 T8549 T8550 advmod rather,than
R5574 T8550 T8547 cc than,late
R5575 T8551 T8553 amod early,phosphorylation
R5576 T8552 T8553 compound Akt,phosphorylation
R5577 T8553 T8554 nsubj phosphorylation,correlates
R5578 T8554 T8545 ccomp correlates,indicating
R5579 T8555 T8554 prep with,correlates
R5580 T8556 T8555 pobj necroptosis,with
R5581 T8557 T8517 punct .,triggered
R5582 T8558 T8561 advmod Secondly,saw
R5583 T8559 T8561 punct ",",saw
R5584 T8560 T8561 nsubj we,saw
R5585 T8561 T8561 ROOT saw,saw
R5586 T8562 T8575 mark that,declined
R5587 T8563 T8564 det the,ability
R5588 T8564 T8575 nsubj ability,declined
R5589 T8565 T8564 prep of,ability
R5590 T8566 T8568 det the,inhibitor
R5591 T8567 T8568 compound Akt,inhibitor
R5592 T8568 T8565 pobj inhibitor,of
R5593 T8569 T8570 aux to,protect
R5594 T8570 T8564 acl protect,ability
R5595 T8571 T8570 dobj cells,protect
R5596 T8572 T8570 prep from,protect
R5597 T8573 T8572 pobj necroptosis,from
R5598 T8574 T8570 advmod rapidly,protect
R5599 T8575 T8561 ccomp declined,saw
R5600 T8576 T8575 prep after,declined
R5601 T8577 T8578 nummod 6,hrs
R5602 T8578 T8576 pobj hrs,after
R5603 T8579 T8578 prep of,hrs
R5604 T8580 T8579 pobj stimulation,of
R5605 T8581 T8575 prep with,declined
R5606 T8582 T8581 pobj zVAD.fmk,with
R5607 T8583 T8582 punct ",",zVAD.fmk
R5608 T8584 T8582 conj TNFα,zVAD.fmk
R5609 T8585 T8584 cc or,TNFα
R5610 T8586 T8584 conj bFGF/zVAD,TNFα
R5611 T8587 T8561 punct .,saw
R5612 T8588 T8593 nsubjpass fmk,observed
R5613 T8589 T8588 cc and,fmk
R5614 T8590 T8591 det no,protection
R5615 T8591 T8588 conj protection,fmk
R5616 T8592 T8593 auxpass was,observed
R5617 T8593 T8593 ROOT observed,observed
R5618 T8594 T8598 advmod when,added
R5619 T8595 T8596 det the,inhibitor
R5620 T8596 T8598 nsubjpass inhibitor,added
R5621 T8597 T8598 auxpass was,added
R5622 T8598 T8593 advcl added,observed
R5623 T8599 T8598 prep at,added
R5624 T8600 T8601 nummod 9,hrs
R5625 T8601 T8599 pobj hrs,at
R5626 T8602 T8601 punct (,hrs
R5627 T8603 T8604 compound Fig.,4B
R5628 T8604 T8601 appos 4B,hrs
R5629 T8605 T8604 punct ",",4B
R5630 T8606 T8604 conj C,4B
R5631 T8607 T8601 punct ),hrs
R5632 T8608 T8593 punct .,observed
R5633 T8609 T8611 det This,frame
R5634 T8610 T8611 compound time,frame
R5635 T8611 T8612 nsubj frame,coincides
R5636 T8612 T8612 ROOT coincides,coincides
R5637 T8613 T8612 prep with,coincides
R5638 T8614 T8615 det the,timing
R5639 T8615 T8613 pobj timing,with
R5640 T8616 T8615 prep of,timing
R5641 T8617 T8621 det the,phosphorylation
R5642 T8618 T8621 amod secondary,phosphorylation
R5643 T8619 T8620 compound Akt,Thr308
R5644 T8620 T8621 compound Thr308,phosphorylation
R5645 T8621 T8616 pobj phosphorylation,of
R5646 T8622 T8612 punct .,coincides
R5647 T8623 T8626 advmod Finally,terminated
R5648 T8624 T8626 punct ",",terminated
R5649 T8625 T8626 nsubj we,terminated
R5650 T8626 T8626 ROOT terminated,terminated
R5651 T8627 T8629 det the,signal
R5652 T8628 T8629 compound bFGF,signal
R5653 T8629 T8626 dobj signal,terminated
R5654 T8630 T8631 nummod one,hour
R5655 T8631 T8632 npadvmod hour,after
R5656 T8632 T8626 prep after,terminated
R5657 T8633 T8632 pobj addition,after
R5658 T8634 T8633 prep of,addition
R5659 T8635 T8634 pobj bFGF,of
R5660 T8636 T8626 prep by,terminated
R5661 T8637 T8638 det the,addition
R5662 T8638 T8636 pobj addition,by
R5663 T8639 T8638 prep of,addition
R5664 T8640 T8639 pobj PD173074,of
R5665 T8641 T8626 punct .,terminated
R5666 T8642 T8643 nsubj This,allowed
R5667 T8643 T8643 ROOT allowed,allowed
R5668 T8644 T8646 nsubj us,retain
R5669 T8645 T8646 aux to,retain
R5670 T8646 T8643 ccomp retain,allowed
R5671 T8647 T8649 amod early,activation
R5672 T8648 T8649 compound Akt,activation
R5673 T8649 T8646 dobj activation,retain
R5674 T8650 T8643 punct ",",allowed
R5675 T8651 T8643 cc but,allowed
R5676 T8652 T8653 aux to,suppress
R5677 T8653 T8643 conj suppress,allowed
R5678 T8654 T8656 det the,increase
R5679 T8655 T8656 amod secondary,increase
R5680 T8656 T8653 dobj increase,suppress
R5681 T8657 T8659 punct (,4D
R5682 T8658 T8659 compound Fig.,4D
R5683 T8659 T8656 appos 4D,increase
R5684 T8660 T8659 punct ),4D
R5685 T8661 T8643 punct .,allowed
R5686 T8662 T8663 preconj Both,pre-addition
R5687 T8663 T8666 amod pre-addition,addition
R5688 T8664 T8663 cc and,pre-addition
R5689 T8665 T8663 conj delayed,pre-addition
R5690 T8666 T8670 nsubj addition,prevented
R5691 T8667 T8666 prep of,addition
R5692 T8668 T8667 pobj PD173074,of
R5693 T8669 T8670 advmod fully,prevented
R5694 T8670 T8670 ROOT prevented,prevented
R5695 T8671 T8670 dobj necroptosis,prevented
R5696 T8672 T8674 punct (,4E
R5697 T8673 T8674 compound Fig.,4E
R5698 T8674 T8671 appos 4E,necroptosis
R5699 T8675 T8674 punct ),4E
R5700 T8676 T8670 punct .,prevented
R5701 T8677 T8685 advmod Overall,indicate
R5702 T8678 T8685 punct ",",indicate
R5703 T8679 T8680 det these,data
R5704 T8680 T8685 nsubj data,indicate
R5705 T8681 T8685 punct ",",indicate
R5706 T8682 T8685 mark while,indicate
R5707 T8683 T8685 nsubj correlative,indicate
R5708 T8684 T8685 punct ",",indicate
R5709 T8685 T8685 ROOT indicate,indicate
R5710 T8686 T8690 mark that,is
R5711 T8687 T8689 amod early,activation
R5712 T8688 T8689 compound Akt,activation
R5713 T8689 T8690 nsubj activation,is
R5714 T8690 T8685 ccomp is,indicate
R5715 T8691 T8690 acomp insufficient,is
R5716 T8692 T8693 aux to,promote
R5717 T8693 T8691 xcomp promote,insufficient
R5718 T8694 T8693 dobj necroptosis,promote
R5719 T8695 T8685 cc and,indicate
R5720 T8696 T8685 conj are,indicate
R5721 T8697 T8698 advmod strongly,supportive
R5722 T8698 T8696 acomp supportive,are
R5723 T8699 T8698 prep of,supportive
R5724 T8700 T8702 det an,role
R5725 T8701 T8702 amod important,role
R5726 T8702 T8699 pobj role,of
R5727 T8703 T8702 prep for,role
R5735 T8714 T8716 det the,activation
R5736 T8715 T8716 amod delayed,activation
R5737 T8716 T8703 pobj activation,for
R5738 T8717 T8716 prep of,activation
R5739 T8718 T8717 pobj Akt,of
R5740 T8719 T8716 prep in,activation
R5741 T8720 T8721 det the,induction
R5742 T8721 T8719 pobj induction,in
R5743 T8722 T8721 prep of,induction
R5744 T8723 T8725 amod necroptotic,death
R5745 T8724 T8725 compound cell,death
R5746 T8725 T8722 pobj death,of
R5747 T8726 T8685 punct .,indicate

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T8763 1240-1250 Positive_regulation denotes activation
T8762 1125-1135 Positive_regulation denotes activation
T8761 1254-1257 Protein denotes Akt
T8760 1121-1124 Protein denotes Akt
T8759 909-919 Positive_regulation denotes activation
T8758 905-908 Protein denotes Akt
T8757 863-871 Protein denotes PD173074
T8756 839-843 Protein denotes bFGF
T8755 800-804 Protein denotes bFGF
T8754 756-771 Phosphorylation denotes phosphorylation
T8753 749-755 Protein denotes Thr308
T8752 479-488 Negative_regulation denotes inhibitor
T8751 590-603 Protein denotes bFGF/zVAD.fmk
T8750 582-586 Protein denotes TNFα
T8749 572-580 Protein denotes zVAD.fmk
T8748 475-478 Protein denotes Akt
T8747 233-242 Positive_regulation denotes triggered
T8746 323-333 Positive_regulation denotes activation
T8745 279-294 Phosphorylation denotes phosphorylation
T8744 233-242 Positive_regulation denotes triggered
T8743 275-278 Protein denotes JNK
T8742 175-188 Protein denotes PDGF/zVAD.fmk
T8741 58-66 Positive_regulation denotes increase
T8740 58-66 Positive_regulation denotes increase
T8739 81-96 Phosphorylation denotes phosphorylation
T8738 81-96 Phosphorylation denotes phosphorylation
T8737 74-80 Protein denotes Thr308
T8736 70-73 Protein denotes Akt
T8735 36-47 Protein denotes RIP1 kinase
R5751 T8736 T8738 themeOf Akt,phosphorylation
R5752 T8737 T8739 themeOf Thr308,phosphorylation
R5753 T8738 T8740 themeOf phosphorylation,increase
R5754 T8739 T8741 themeOf phosphorylation,increase
R5755 T8742 T8744 causeOf PDGF/zVAD.fmk,triggered
R5756 T8742 T8747 causeOf PDGF/zVAD.fmk,triggered
R5757 T8743 T8744 themeOf JNK,triggered
R5758 T8743 T8745 themeOf JNK,phosphorylation
R5759 T8745 T8746 themeOf phosphorylation,activation
R5760 T8745 T8747 themeOf phosphorylation,triggered
R5761 T8748 T8752 themeOf Akt,inhibitor
R5762 T8753 T8754 themeOf Thr308,phosphorylation
R5763 T8758 T8759 themeOf Akt,activation
R5764 T8760 T8762 themeOf Akt,activation
R5765 T8761 T8763 themeOf Akt,activation

test3

Id Subject Object Predicate Lexical cue
T8133 1240-1250 Positive_regulation denotes activation
T8132 1125-1135 Positive_regulation denotes activation
T8131 909-919 Positive_regulation denotes activation
T8130 839-843 Protein denotes bFGF
T8129 800-804 Protein denotes bFGF
T8128 756-771 Phosphorylation denotes phosphorylation
T8127 644-653 Negative_regulation denotes inhibitor
T8126 590-594 Protein denotes bFGF
T8125 582-586 Protein denotes TNFα
T8124 479-488 Negative_regulation denotes inhibitor
T8123 389-404 Phosphorylation denotes phosphorylation
T8122 279-294 Phosphorylation denotes phosphorylation
T8121 81-96 Phosphorylation denotes phosphorylation
T8120 58-66 Positive_regulation denotes increase
T8119 36-40 Protein denotes RIP1
T8116 839-843 Protein denotes bFGF
T8115 800-804 Protein denotes bFGF
T8114 590-594 Protein denotes bFGF
T8113 582-586 Protein denotes TNFα
T8112 36-40 Protein denotes RIP1
R5256 T8121 T8120 themeOf phosphorylation,increase
R5257 T8129 T8130 themeOf bFGF,bFGF