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PMC:3585731 / 16653-16737 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T7371 69-84 Phosphorylation denotes phosphorylation
T7370 47-54 Regulation denotes changes
T7369 24-33 Negative_regulation denotes attenuate
T7357 34-38 Protein denotes TNFα
R4785 T7370 T7369 themeOf changes,attenuate
R4786 T7371 T7370 themeOf phosphorylation,changes

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7525 69-84 NN denotes phosphorylation
T7524 65-68 NN denotes JNK
T7523 62-64 CC denotes or
T7522 58-61 NN denotes Akt
T7521 55-57 IN denotes in
T7520 47-54 NN denotes changes
T7519 34-46 JJ denotes TNFα-induced
T7518 24-33 VB denotes attenuate
T7517 20-23 RB denotes not
T7516 16-19 VB denotes did
T7515 5-15 NN denotes inhibitors
T7514 0-4 NN denotes FGFR
R4826 T7515 T7514 arg1Of inhibitors,FGFR
R4827 T7515 T7516 arg1Of inhibitors,did
R4828 T7515 T7518 arg1Of inhibitors,attenuate
R4833 T7518 T7516 arg2Of attenuate,did
R4834 T7518 T7517 arg1Of attenuate,not
R4837 T7520 T7518 arg2Of changes,attenuate
R4838 T7520 T7519 arg1Of changes,TNFα-induced
R4839 T7520 T7521 arg1Of changes,in
R4840 T7522 T7523 arg1Of Akt,or
R4841 T7524 T7523 arg2Of JNK,or
R4842 T7525 T7521 arg2Of phosphorylation,in
R4843 T7525 T7522 arg1Of phosphorylation,Akt
R4844 T7525 T7524 arg1Of phosphorylation,JNK

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T7433 34-38 Protein denotes TNFα

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T7700 58-61 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T7696 58-61 http://www.uniprot.org/uniprot/P31751 denotes Akt
T7692 58-61 http://www.uniprot.org/uniprot/P31749 denotes Akt
T7686 34-38 http://www.uniprot.org/uniprot/P01375 denotes TNFα

GO-BP

Id Subject Object Predicate Lexical cue
T7453 65-68 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK
T7452 0-4 http://purl.obolibrary.org/obo/GO_0005007 denotes FGFR
T7443 69-84 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

GO-MF

Id Subject Object Predicate Lexical cue
T7461 65-68 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK
T7460 0-4 http://purl.obolibrary.org/obo/GO_0005007 denotes FGFR

simple1

Id Subject Object Predicate Lexical cue
T7467 34-38 Protein denotes TNFα

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7681 39-46 Positive_regulation denotes induced
T7672 34-38 Protein denotes TNFα
R4988 T7672 T7681 themeOf TNFα,induced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T7940 39-46 Positive_regulation denotes induced
T7931 34-38 Protein denotes TNFα
R5193 T7931 T7940 themeOf TNFα,induced

DLUT931

Id Subject Object Predicate Lexical cue
T7718 39-46 Positive_regulation denotes induced
T7708 34-38 Protein denotes TNFα
R4992 T7708 T7718 themeOf TNFα,induced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue Negation
T8073 0-84 Negative_regulation denotes FGFR inhibitors did not attenuate TNFα-induced changes in Akt or JNK phosphorylation true
T8068 65-84 Phosphorylation denotes JNK phosphorylation
T8053 65-68 Protein denotes JNK
T8050 34-46 Protein denotes TNFα-induced
T8033 0-15 Entity denotes FGFR inhibitors
T8029 58-61 Protein denotes Akt
R5234 T8033 T8073 causeOf FGFR inhibitors,FGFR inhibitors did not attenuate TNFα-induced changes in Akt or JNK phosphorylation
R5243 T8053 T8068 themeOf JNK,JNK phosphorylation

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7761 69-84 NN denotes phosphorylation
T7760 65-68 NNP denotes JNK
T7759 62-64 CC denotes or
T7758 58-61 NNP denotes Akt
T7757 55-57 IN denotes in
T7756 47-54 NNS denotes changes
T7755 34-46 JJ denotes TNFα-induced
T7754 24-33 VB denotes attenuate
T7753 20-23 RB denotes not
T7752 16-19 VBD denotes did
T7751 5-15 NNS denotes inhibitors
T7750 0-4 NNP denotes FGFR
R5025 T7750 T7751 compound FGFR,inhibitors
R5026 T7751 T7754 nsubj inhibitors,attenuate
R5027 T7752 T7754 aux did,attenuate
R5028 T7753 T7754 neg not,attenuate
R5029 T7754 T7754 ROOT attenuate,attenuate
R5030 T7755 T7756 amod TNFα-induced,changes
R5031 T7756 T7754 dobj changes,attenuate
R5032 T7757 T7756 prep in,changes
R5033 T7758 T7757 pobj Akt,in
R5034 T7759 T7758 cc or,Akt
R5035 T7760 T7761 compound JNK,phosphorylation
R5036 T7761 T7754 oprd phosphorylation,attenuate

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T7958 69-84 Phosphorylation denotes phosphorylation
T7957 69-84 Phosphorylation denotes phosphorylation
T7956 5-15 Negative_regulation denotes inhibitors
T7952 65-68 Protein denotes JNK
T7951 58-61 Protein denotes Akt
T7950 34-38 Protein denotes TNFα
T7949 0-4 Protein denotes FGFR
R5198 T7949 T7956 themeOf FGFR,inhibitors
R5199 T7951 T7957 themeOf Akt,phosphorylation
R5200 T7952 T7958 themeOf JNK,phosphorylation

test3

Id Subject Object Predicate Lexical cue
T7395 69-84 Phosphorylation denotes phosphorylation
T7394 47-54 Regulation denotes changes
T7393 39-46 Positive_regulation denotes induced
T7392 34-38 Protein denotes TNFα
T7379 34-38 Protein denotes TNFα
R4789 T7392 T7393 causeOf TNFα,induced
R4790 T7394 T7393 themeOf changes,induced
R4791 T7395 T7394 themeOf phosphorylation,changes