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PMC:3585731 / 13741-14417 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T5126 666-675 Regulation denotes dependent
T5125 623-638 Phosphorylation denotes phosphorylation
T5124 527-542 Phosphorylation denotes phosphorylation
T5123 511-516 Regulation denotes alter
T5122 463-473 Negative_regulation denotes attenuated
T5121 434-442 Positive_regulation denotes increase
T5120 354-363 Positive_regulation denotes following
T5119 247-254 Negative_regulation denotes reduced
T5118 82-97 Phosphorylation denotes phosphorylation
T5117 59-67 Positive_regulation denotes increase
T5116 45-54 Negative_regulation denotes prevented
T5115 16-25 Negative_regulation denotes inhibitor
T5077 661-665 Protein denotes RIP1
T5076 446-451 Protein denotes c-Jun
T5075 348-353 Protein denotes c-Jun
T5074 273-277 Protein denotes TNFα
T5073 78-81 Protein denotes Akt
T5072 4-8 Protein denotes RIP1
R3505 T5072 T5115 themeOf RIP1,inhibitor
R3506 T5073 T5118 themeOf Akt,phosphorylation
R3507 T5074 T5119 causeOf TNFα,reduced
R3508 T5076 T5121 themeOf c-Jun,increase
R3509 T5077 T5125 themeOf RIP1,phosphorylation
R3521 T5115 T5116 causeOf inhibitor,prevented
R3522 T5117 T5116 themeOf increase,prevented
R3523 T5118 T5117 themeOf phosphorylation,increase
R3524 T5121 T5122 themeOf increase,attenuated
R3525 T5124 T5123 themeOf phosphorylation,alter
R3526 T5125 T5126 themeOf phosphorylation,dependent

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6112 666-675 JJ denotes dependent
T6111 661-665 NN denotes RIP1
T6110 658-660 VB denotes is
T6109 646-657 NN denotes necroptosis
T6108 639-645 IN denotes during
T6107 623-638 NN denotes phosphorylation
T6106 619-622 NN denotes JNK
T6105 615-618 CC denotes and
T6060 344-347 CC denotes and
T6059 340-343 NN denotes JNK
T6058 337-339 IN denotes of
T6057 330-336 NN denotes levels
T6056 322-329 NN denotes protein
T6055 316-321 JJ denotes total
T6054 313-315 IN denotes in
T6053 305-312 NN denotes changes
T6052 300-304 DT denotes some
T6051 291-299 VB denotes observed
T6050 288-290 PRP denotes We
T6049 278-286 NN denotes addition
T6048 273-277 NN denotes TNFα
T6047 267-272 IN denotes after
T6046 260-266 NN denotes change
T6045 255-259 DT denotes this
T6044 247-254 VB denotes reduced
T6043 233-246 RB denotes substantially
T6042 229-232 CC denotes and
T6041 220-228 NN denotes zVAD.fmk
T6040 217-219 TO denotes to
T6039 208-216 NN denotes response
T6038 205-207 IN denotes in
T6037 189-204 NN denotes phosphorylation
T6036 185-188 NN denotes JNK
T6035 182-184 IN denotes of
T6034 172-181 NN denotes induction
T6033 168-171 DT denotes the
T6032 158-167 VB denotes prevented
T6031 152-157 NN denotes Nec-1
T6030 150-151 -COMMA- denotes ,
T6029 141-150 RB denotes Similarly
T6028 138-139 -RRB- denotes )
T6027 135-138 NN denotes S1D
T6026 130-134 NNP denotes Fig.
T6025 128-129 -COMMA- denotes ,
T6024 126-128 NNP denotes 3A
T6023 121-125 NNP denotes Fig.
T6022 120-121 -LRB- denotes (
T6021 116-119 RB denotes not
T6020 112-115 VB denotes did
T6019 105-111 NN denotes Nec-1i
T6018 99-104 IN denotes while
T6017 97-98 -COMMA- denotes ,
T6016 82-97 NN denotes phosphorylation
T6015 78-81 NN denotes Akt
T6014 71-77 NN denotes Thr308
T6013 68-70 IN denotes in
T6012 59-67 NN denotes increase
T6011 55-58 DT denotes the
T6010 45-54 VB denotes prevented
T6009 34-44 RB denotes completely
T6008 32-33 -COMMA- denotes ,
T6007 27-32 NN denotes Nec-1
T6006 25-26 -COMMA- denotes ,
T6005 16-25 NN denotes inhibitor
T6004 9-15 NN denotes kinase
T6003 4-8 NN denotes RIP1
T6002 0-3 DT denotes The
T6081 484-495 RB denotes Importantly
T6104 608-614 NN denotes Thr308
T6103 604-607 NN denotes Akt
T6102 599-603 IN denotes that
T6101 587-598 VB denotes established
T6100 582-586 DT denotes This
T6099 579-580 -RRB- denotes )
T6098 577-579 NN denotes 3A
T6097 572-576 NN denotes Fig.
T6096 571-572 -LRB- denotes (
T6095 567-570 NN denotes JNK
T6094 564-566 CC denotes or
T6093 560-563 NN denotes Akt
T6092 553-559 CC denotes either
T6091 550-552 IN denotes of
T6090 543-549 NN denotes levels
T6089 527-542 NN denotes phosphorylation
T6088 521-526 JJ denotes basal
T6087 517-520 DT denotes the
T6086 511-516 VB denotes alter
T6085 507-510 RB denotes not
T6084 503-506 VB denotes did
T6083 497-502 NN denotes Nec-1
T6082 495-496 -COMMA- denotes ,
T6080 477-482 NN denotes Nec-1
T6079 474-476 IN denotes by
T6078 463-473 VB denotes attenuated
T6077 458-462 RB denotes also
T6076 453-457 VB denotes were
T6075 451-452 -COMMA- denotes ,
T6074 446-451 NN denotes c-Jun
T6073 443-445 IN denotes in
T6072 434-442 NN denotes increase
T6071 417-433 JJ denotes zVAD.fmk-induced
T6070 412-416 FW denotes e.g.
T6069 410-411 -COMMA- denotes ,
T6068 403-410 NN denotes changes
T6067 397-402 DT denotes these
T6066 394-396 IN denotes of
T6065 389-393 DT denotes Some
T6064 376-387 NN denotes stimulation
T6063 364-375 JJ denotes necroptotic
T6062 354-363 VB denotes following
T6061 348-353 NN denotes c-Jun
R4054 T6005 T6002 arg1Of inhibitor,The
R4055 T6005 T6003 arg1Of inhibitor,RIP1
R4056 T6005 T6004 arg1Of inhibitor,kinase
R4057 T6005 T6006 arg1Of inhibitor,","
R4058 T6005 T6010 arg1Of inhibitor,prevented
R4059 T6007 T6006 arg2Of Nec-1,","
R4060 T6010 T6008 arg1Of prevented,","
R4061 T6010 T6009 arg1Of prevented,completely
R4062 T6010 T6017 arg1Of prevented,","
R4063 T6010 T6018 arg1Of prevented,while
R4064 T6012 T6010 arg2Of increase,prevented
R4065 T6012 T6011 arg1Of increase,the
R4066 T6012 T6013 arg1Of increase,in
R4067 T6016 T6013 arg2Of phosphorylation,in
R4068 T6016 T6014 arg1Of phosphorylation,Thr308
R4069 T6016 T6015 arg1Of phosphorylation,Akt
R4070 T6019 T6020 arg1Of Nec-1i,did
R4071 T6020 T6018 arg2Of did,while
R4072 T6020 T6021 arg1Of did,not
R4073 T6020 T6022 arg1Of did,(
R4074 T6024 T6022 arg2Of 3A,(
R4075 T6024 T6023 arg1Of 3A,Fig.
R4076 T6024 T6025 arg1Of 3A,","
R4077 T6027 T6025 arg2Of S1D,","
R4078 T6027 T6026 arg1Of S1D,Fig.
R4079 T6028 T6022 arg3Of ),(
R4080 T6031 T6032 arg1Of Nec-1,prevented
R4081 T6031 T6044 arg1Of Nec-1,reduced
R4082 T6032 T6038 arg1Of prevented,in
R4083 T6032 T6042 arg1Of prevented,and
R4084 T6034 T6032 arg2Of induction,prevented
R4085 T6034 T6033 arg1Of induction,the
R4086 T6034 T6035 arg1Of induction,of
R4087 T6037 T6035 arg2Of phosphorylation,of
R4088 T6037 T6036 arg1Of phosphorylation,JNK
R4089 T6038 T6040 arg1Of in,to
R4090 T6039 T6038 arg2Of response,in
R4091 T6041 T6038 arg3Of zVAD.fmk,in
R4092 T6042 T6029 arg1Of and,Similarly
R4093 T6042 T6030 arg1Of and,","
R4094 T6044 T6042 arg2Of reduced,and
R4095 T6044 T6043 arg1Of reduced,substantially
R4096 T6044 T6047 arg1Of reduced,after
R4097 T6046 T6044 arg2Of change,reduced
R4098 T6046 T6045 arg1Of change,this
R4099 T6049 T6047 arg2Of addition,after
R4100 T6049 T6048 arg1Of addition,TNFα
R4101 T6050 T6051 arg1Of We,observed
R4102 T6053 T6051 arg2Of changes,observed
R4103 T6053 T6052 arg1Of changes,some
R4104 T6053 T6054 arg1Of changes,in
R4105 T6057 T6054 arg2Of levels,in
R4106 T6057 T6055 arg1Of levels,total
R4107 T6057 T6056 arg1Of levels,protein
R4108 T6057 T6058 arg1Of levels,of
R4109 T6059 T6060 arg1Of JNK,and
R4110 T6060 T6058 arg2Of and,of
R4111 T6060 T6062 arg1Of and,following
R4112 T6061 T6060 arg2Of c-Jun,and
R4113 T6064 T6062 arg2Of stimulation,following
R4114 T6064 T6063 arg1Of stimulation,necroptotic
R4115 T6065 T6066 arg1Of Some,of
R4116 T6065 T6069 arg1Of Some,","
R4117 T6065 T6076 arg1Of Some,were
R4118 T6065 T6078 arg2Of Some,attenuated
R4119 T6068 T6066 arg2Of changes,of
R4120 T6068 T6067 arg1Of changes,these
R4121 T6072 T6069 arg2Of increase,","
R4122 T6072 T6070 arg1Of increase,e.g.
R4123 T6072 T6071 arg1Of increase,zVAD.fmk-induced
R4124 T6072 T6073 arg1Of increase,in
R4125 T6074 T6073 arg2Of c-Jun,in
R4126 T6078 T6075 arg1Of attenuated,","
R4127 T6078 T6076 arg2Of attenuated,were
R4128 T6078 T6077 arg1Of attenuated,also
R4129 T6080 T6078 arg1Of Nec-1,attenuated
R4130 T6080 T6079 arg2Of Nec-1,by
R4131 T6083 T6084 arg1Of Nec-1,did
R4132 T6083 T6086 arg1Of Nec-1,alter
R4133 T6086 T6081 arg1Of alter,Importantly
R4134 T6086 T6082 arg1Of alter,","
R4135 T6086 T6084 arg2Of alter,did
R4136 T6086 T6085 arg1Of alter,not
R4137 T6090 T6086 arg2Of levels,alter
R4138 T6090 T6087 arg1Of levels,the
R4139 T6090 T6088 arg1Of levels,basal
R4140 T6090 T6089 arg1Of levels,phosphorylation
R4141 T6090 T6091 arg1Of levels,of
R4142 T6093 T6094 arg1Of Akt,or
R4143 T6094 T6091 arg2Of or,of
R4144 T6094 T6092 arg1Of or,either
R4145 T6094 T6096 arg1Of or,(
R4146 T6095 T6094 arg2Of JNK,or
R4147 T6098 T6096 arg2Of 3A,(
R4148 T6098 T6097 arg1Of 3A,Fig.
R4149 T6099 T6096 arg3Of ),(
R4150 T6100 T6101 arg1Of This,established
R4151 T6104 T6103 arg1Of Thr308,Akt
R4152 T6104 T6105 arg1Of Thr308,and
R4153 T6105 T6108 arg1Of and,during
R4154 T6105 T6110 arg1Of and,is
R4155 T6105 T6112 arg1Of and,dependent
R4156 T6107 T6105 arg2Of phosphorylation,and
R4157 T6107 T6106 arg1Of phosphorylation,JNK
R4158 T6109 T6108 arg2Of necroptosis,during
R4159 T6110 T6101 arg2Of is,established
R4160 T6110 T6102 arg1Of is,that
R4161 T6112 T6110 arg2Of dependent,is
R4162 T6112 T6111 arg1Of dependent,RIP1

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T5388 661-665 Protein denotes RIP1
T5387 446-451 Protein denotes c-Jun
T5386 348-353 Protein denotes c-Jun
T5385 273-277 Protein denotes TNFα
T5384 78-81 Protein denotes Akt
T5383 4-8 Protein denotes RIP1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6509 604-607 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T6508 560-563 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T6507 78-81 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T6481 604-607 http://www.uniprot.org/uniprot/P31751 denotes Akt
T6480 560-563 http://www.uniprot.org/uniprot/P31751 denotes Akt
T6479 78-81 http://www.uniprot.org/uniprot/P31751 denotes Akt
T6431 661-665 http://www.uniprot.org/uniprot/Q13546 denotes RIP1
T6430 4-8 http://www.uniprot.org/uniprot/Q13546 denotes RIP1
T6453 604-607 http://www.uniprot.org/uniprot/P31749 denotes Akt
T6452 560-563 http://www.uniprot.org/uniprot/P31749 denotes Akt
T6451 78-81 http://www.uniprot.org/uniprot/P31749 denotes Akt
T6537 446-451 http://www.uniprot.org/uniprot/P05412 denotes c-Jun
T6536 348-353 http://www.uniprot.org/uniprot/P05412 denotes c-Jun
T6533 273-277 http://www.uniprot.org/uniprot/P01375 denotes TNFα

GO-BP

Id Subject Object Predicate Lexical cue
T5470 623-638 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T5469 527-542 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T5468 189-204 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T5467 82-97 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T5462 9-25 http://purl.obolibrary.org/obo/GO_0033673 denotes kinase inhibitor
T5454 619-622 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK
T5453 567-570 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK
T5452 340-343 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK
T5451 185-188 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK
T5417 646-657 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T5407 646-657 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis

GO-MF

Id Subject Object Predicate Lexical cue
T5502 619-622 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK
T5501 567-570 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK
T5500 340-343 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK
T5499 185-188 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK

sentences

Id Subject Object Predicate Lexical cue
T5302 582-676 Sentence denotes This established that Akt Thr308 and JNK phosphorylation during necroptosis is RIP1 dependent.
T5301 484-581 Sentence denotes Importantly, Nec-1 did not alter the basal phosphorylation levels of either Akt or JNK (Fig. 3A).
T5300 389-483 Sentence denotes Some of these changes, e.g. zVAD.fmk-induced increase in c-Jun, were also attenuated by Nec-1.
T5299 288-388 Sentence denotes We observed some changes in total protein levels of JNK and c-Jun following necroptotic stimulation.
T5298 141-287 Sentence denotes Similarly, Nec-1 prevented the induction of JNK phosphorylation in response to zVAD.fmk and substantially reduced this change after TNFα addition.
T5297 0-140 Sentence denotes The RIP1 kinase inhibitor, Nec-1, completely prevented the increase in Thr308 Akt phosphorylation, while Nec-1i did not (Fig. 3A, Fig. S1D).
T88 0-140 Sentence denotes The RIP1 kinase inhibitor, Nec-1, completely prevented the increase in Thr308 Akt phosphorylation, while Nec-1i did not (Fig. 3A, Fig. S1D).
T89 141-287 Sentence denotes Similarly, Nec-1 prevented the induction of JNK phosphorylation in response to zVAD.fmk and substantially reduced this change after TNFα addition.
T90 288-388 Sentence denotes We observed some changes in total protein levels of JNK and c-Jun following necroptotic stimulation.
T91 389-483 Sentence denotes Some of these changes, e.g. zVAD.fmk-induced increase in c-Jun, were also attenuated by Nec-1.
T92 484-581 Sentence denotes Importantly, Nec-1 did not alter the basal phosphorylation levels of either Akt or JNK (Fig. 3A).
T93 582-676 Sentence denotes This established that Akt Thr308 and JNK phosphorylation during necroptosis is RIP1 dependent.

simple1

Id Subject Object Predicate Lexical cue
T5541 661-665 Protein denotes RIP1
T5540 446-451 Protein denotes c-Jun
T5539 348-353 Protein denotes c-Jun
T5538 273-277 Protein denotes TNFα
T5537 78-81 Protein denotes Akt
T5536 4-8 Protein denotes RIP1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T6422 434-442 Positive_regulation denotes increase
T6421 305-312 Regulation denotes changes
T6420 16-25 Negative_regulation denotes inhibitor
T6419 59-67 Positive_regulation denotes increase
T6418 82-97 Phosphorylation denotes phosphorylation
T6417 45-54 Negative_regulation denotes prevented
T6400 661-665 Protein denotes RIP1
T6399 446-451 Protein denotes c-Jun
T6398 348-353 Protein denotes c-Jun
T6397 273-277 Protein denotes TNFα
T6396 78-81 Protein denotes Akt
T6395 4-8 Protein denotes RIP1
R4407 T6395 T6420 themeOf RIP1,inhibitor
R4408 T6396 T6418 themeOf Akt,phosphorylation
R4409 T6398 T6421 themeOf c-Jun,changes
R4410 T6399 T6422 themeOf c-Jun,increase
R4418 T6418 T6419 themeOf phosphorylation,increase
R4419 T6419 T6417 themeOf increase,prevented

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6706 434-442 Positive_regulation denotes increase
T6705 305-312 Regulation denotes changes
T6704 82-97 Phosphorylation denotes phosphorylation
T6703 45-54 Negative_regulation denotes prevented
T6702 16-25 Negative_regulation denotes inhibitor
T6701 59-67 Positive_regulation denotes increase
T6681 661-665 Protein denotes RIP1
T6680 446-451 Protein denotes c-Jun
T6679 348-353 Protein denotes c-Jun
T6678 273-277 Protein denotes TNFα
T6677 78-81 Protein denotes Akt
T6676 4-8 Protein denotes RIP1
R4487 T6676 T6702 themeOf RIP1,inhibitor
R4488 T6677 T6704 themeOf Akt,phosphorylation
R4489 T6679 T6705 themeOf c-Jun,changes
R4490 T6680 T6706 themeOf c-Jun,increase
R4495 T6701 T6703 themeOf increase,prevented
R4496 T6702 T6703 causeOf inhibitor,prevented
R4497 T6704 T6701 themeOf phosphorylation,increase

DLUT931

Id Subject Object Predicate Lexical cue
T6587 417-433 Positive_regulation denotes zVAD.fmk-induced
T6586 434-442 Positive_regulation denotes increase
T6585 305-312 Regulation denotes changes
T6584 45-54 Negative_regulation denotes prevented
T6583 59-67 Positive_regulation denotes increase
T6582 82-97 Phosphorylation denotes phosphorylation
T6581 16-25 Negative_regulation denotes inhibitor
T6561 661-665 Protein denotes RIP1
T6560 446-451 Protein denotes c-Jun
T6559 348-353 Protein denotes c-Jun
T6558 273-277 Protein denotes TNFα
T6557 78-81 Protein denotes Akt
T6556 4-8 Protein denotes RIP1
R4432 T6556 T6581 themeOf RIP1,inhibitor
R4433 T6557 T6582 themeOf Akt,phosphorylation
R4434 T6559 T6585 themeOf c-Jun,changes
R4435 T6560 T6586 themeOf c-Jun,increase
R4447 T6581 T6584 causeOf inhibitor,prevented
R4448 T6582 T6583 themeOf phosphorylation,increase
R4449 T6583 T6584 themeOf increase,prevented
R4450 T6586 T6587 themeOf increase,zVAD.fmk-induced
R4451 T6587 T6586 themeOf zVAD.fmk-induced,increase

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T7307 27-98 Negative_regulation denotes Nec-1, completely prevented the increase in Thr308 Akt phosphorylation,
T7303 68-97 Phosphorylation denotes in Thr308 Akt phosphorylation
T7301 55-98 Positive_regulation denotes the increase in Thr308 Akt phosphorylation,
T7296 619-638 Phosphorylation denotes JNK phosphorylation
T7292 182-204 Phosphorylation denotes of JNK phosphorylation
T7269 567-580 Protein denotes JNK (Fig. 3A)
T7267 152-157 Protein denotes Nec-1
T7263 443-452 Protein denotes in c-Jun,
T7258 608-614 Entity denotes Thr308
T7257 474-482 Protein denotes by Nec-1
T7255 417-433 Entity denotes zVAD.fmk-induced
T7253 27-32 Protein denotes Nec-1
T7232 348-387 Protein denotes c-Jun following necroptotic stimulation
T7231 661-675 Protein denotes RIP1 dependent
T7223 273-277 Protein denotes TNFα
T7219 619-622 Protein denotes JNK
T7216 185-188 Protein denotes JNK
T7213 560-563 Protein denotes Akt
T7210 0-26 Protein denotes The RIP1 kinase inhibitor,
T7209 604-638 Protein denotes Akt Thr308 and JNK phosphorylation
T7199 0-26 Entity denotes The RIP1 kinase inhibitor,
T7175 71-77 Entity denotes Thr308
T7173 340-343 Protein denotes JNK
T7170 220-228 Entity denotes zVAD.fmk
T7159 0-26 Protein denotes The RIP1 kinase inhibitor,
T7156 71-81 Protein denotes Thr308 Akt
T7154 497-502 Protein denotes Nec-1
R4704 T7156 T7303 themeOf Thr308 Akt,in Thr308 Akt phosphorylation
R4719 T7175 T7156 partOf Thr308,Thr308 Akt
R4720 T7175 T7303 siteOf Thr308,in Thr308 Akt phosphorylation
R4738 T7216 T7292 themeOf JNK,of JNK phosphorylation
R4741 T7219 T7296 themeOf JNK,JNK phosphorylation
R4759 T7253 T7307 causeOf Nec-1,"Nec-1, completely prevented the increase in Thr308 Akt phosphorylation,"
R4778 T7301 T7307 themeOf "the increase in Thr308 Akt phosphorylation,","Nec-1, completely prevented the increase in Thr308 Akt phosphorylation,"
R4779 T7303 T7301 themeOf in Thr308 Akt phosphorylation,"the increase in Thr308 Akt phosphorylation,"

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T6832 666-675 Positive_regulation denotes dependent
T6831 666-675 Positive_regulation denotes dependent
T6830 666-675 Positive_regulation denotes dependent
T6829 666-675 Positive_regulation denotes dependent
T6828 623-638 Phosphorylation denotes phosphorylation
T6827 623-638 Phosphorylation denotes phosphorylation
T6826 661-665 Protein denotes RIP1
T6825 619-622 Protein denotes JNK
T6824 604-614 Protein denotes Akt Thr308
T6823 527-542 Phosphorylation denotes phosphorylation
T6822 527-542 Phosphorylation denotes phosphorylation
T6821 527-542 Phosphorylation denotes phosphorylation
T6820 572-579 Protein denotes Fig. 3A
T6819 567-570 Protein denotes JNK
T6818 560-563 Protein denotes Akt
T6817 497-502 Protein denotes Nec-1
T6816 477-482 Protein denotes Nec-1
T6815 305-312 Regulation denotes changes
T6814 340-343 Protein denotes JNK
T6813 158-167 Negative_regulation denotes prevented
T6812 172-181 Positive_regulation denotes induction
T6811 189-204 Phosphorylation denotes phosphorylation
T6810 273-277 Protein denotes TNFα
T6809 185-188 Protein denotes JNK
T6808 152-157 Protein denotes Nec-1
T6807 45-54 Negative_regulation denotes prevented
T6806 59-67 Positive_regulation denotes increase
T6805 82-97 Phosphorylation denotes phosphorylation
T6804 135-138 Protein denotes S1D
T6803 130-133 Protein denotes Fig
T6802 121-128 Protein denotes Fig. 3A
T6801 105-111 Protein denotes Nec-1i
T6800 71-81 Protein denotes Thr308 Akt
T6799 27-32 Protein denotes Nec-1
T6798 4-15 Protein denotes RIP1 kinase
R4540 T6799 T6807 causeOf Nec-1,prevented
R4542 T6800 T6805 themeOf Thr308 Akt,phosphorylation
R4544 T6805 T6806 themeOf phosphorylation,increase
R4546 T6806 T6807 themeOf increase,prevented
R4548 T6808 T6813 causeOf Nec-1,prevented
R4551 T6809 T6811 themeOf JNK,phosphorylation
R4557 T6811 T6812 themeOf phosphorylation,induction
R4558 T6812 T6813 themeOf induction,prevented
R4559 T6814 T6815 themeOf JNK,changes
R4564 T6817 T6821 themeOf Nec-1,phosphorylation
R4566 T6818 T6822 themeOf Akt,phosphorylation
R4570 T6819 T6823 themeOf JNK,phosphorylation
R4573 T6824 T6827 themeOf Akt Thr308,phosphorylation
R4580 T6824 T6829 causeOf Akt Thr308,dependent
R4582 T6824 T6830 causeOf Akt Thr308,dependent
R4583 T6825 T6828 themeOf JNK,phosphorylation
R4585 T6826 T6831 causeOf RIP1,dependent
R4587 T6826 T6832 causeOf RIP1,dependent
R4589 T6827 T6829 themeOf phosphorylation,dependent
R4591 T6827 T6831 themeOf phosphorylation,dependent
R4593 T6828 T6830 themeOf phosphorylation,dependent
R4595 T6828 T6832 themeOf phosphorylation,dependent

test3

Id Subject Object Predicate Lexical cue
T5241 666-675 Regulation denotes dependent
T5240 661-665 Protein denotes RIP1
T5239 623-638 Phosphorylation denotes phosphorylation
T5238 527-542 Phosphorylation denotes phosphorylation
T5237 511-516 Regulation denotes alter
T5236 463-473 Negative_regulation denotes attenuated
T5235 446-451 Protein denotes c-Jun
T5234 434-442 Positive_regulation denotes increase
T5233 426-433 Positive_regulation denotes induced
T5232 348-353 Protein denotes c-Jun
T5231 273-277 Protein denotes TNFα
T5230 247-254 Negative_regulation denotes reduced
T5229 82-97 Phosphorylation denotes phosphorylation
T5228 78-81 Protein denotes Akt
T5227 59-67 Positive_regulation denotes increase
T5226 45-54 Negative_regulation denotes prevented
T5225 16-25 Negative_regulation denotes inhibitor
T5224 4-8 Protein denotes RIP1
T5173 661-665 Protein denotes RIP1
T5172 446-451 Protein denotes c-Jun
T5171 348-353 Protein denotes c-Jun
T5170 273-277 Protein denotes TNFα
T5169 78-81 Protein denotes Akt
T5168 4-8 Protein denotes RIP1
R3551 T5224 T5225 themeOf RIP1,inhibitor
R3552 T5225 T5227 causeOf inhibitor,increase
R3553 T5225 T5226 causeOf inhibitor,prevented
R3554 T5227 T5226 themeOf increase,prevented
R3555 T5228 T5229 themeOf Akt,phosphorylation
R3556 T5229 T5227 themeOf phosphorylation,increase
R3557 T5233 T5236 themeOf induced,attenuated
R3558 T5234 T5233 themeOf increase,induced
R3559 T5235 T5234 themeOf c-Jun,increase
R3560 T5235 T5236 themeOf c-Jun,attenuated
R3561 T5238 T5237 themeOf phosphorylation,alter
R3562 T5239 T5241 themeOf phosphorylation,dependent
R3563 T5240 T5239 themeOf RIP1,phosphorylation