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PMC:3585731 / 13-104 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T11 1-5 Protein denotes TNFα
T12 30-34 Protein denotes RIP1

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T155 1-5 NNP denotes TNFα
T156 6-15 NNP denotes Synthesis
T157 16-26 NNP denotes Downstream
T158 27-29 IN denotes of
T159 30-34 NN denotes RIP1
T160 35-41 NN denotes Kinase
T161 42-52 NN denotes Activation
T162 53-59 IN denotes during
T163 60-71 NN denotes Necroptosis
R18 T157 T155 arg1Of Downstream,TNFα
R19 T157 T156 arg1Of Downstream,Synthesis
R20 T157 T158 arg1Of Downstream,of
R21 T161 T158 arg2Of Activation,of
R22 T161 T159 arg1Of Activation,RIP1
R23 T161 T160 arg1Of Activation,Kinase
R24 T163 T162 arg2Of Necroptosis,during

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T88 1-5 Protein denotes TNFα
T89 30-34 Protein denotes RIP1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T401 1-5 http://www.uniprot.org/uniprot/P01375 denotes TNFα
T405 30-34 http://www.uniprot.org/uniprot/Q13546 denotes RIP1

GO-BP

Id Subject Object Predicate Lexical cue
T98 6-15 http://purl.obolibrary.org/obo/GO_0009058 denotes Synthesis
T99 60-71 http://purl.obolibrary.org/obo/GO_0070266 denotes Necroptosis
T107 60-71 http://purl.obolibrary.org/obo/GO_0097528 denotes Necroptosis

simple1

Id Subject Object Predicate Lexical cue
T143 1-5 Protein denotes TNFα
T144 30-34 Protein denotes RIP1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T353 1-5 Protein denotes TNFα
T354 30-34 Protein denotes RIP1
T364 6-15 Gene_expression denotes Synthesis
T365 42-52 Positive_regulation denotes Activation
R450 T353 T364 themeOf TNFα,Synthesis
R451 T354 T365 themeOf RIP1,Activation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T441 1-5 Protein denotes TNFα
T442 30-34 Protein denotes RIP1
T451 6-15 Gene_expression denotes Synthesis
T453 42-52 Positive_regulation denotes Activation
R469 T441 T451 themeOf TNFα,Synthesis
R470 T442 T453 themeOf RIP1,Activation

DLUT931

Id Subject Object Predicate Lexical cue
T410 1-5 Protein denotes TNFα
T411 30-34 Protein denotes RIP1
T420 6-15 Gene_expression denotes Synthesis
T421 42-52 Positive_regulation denotes Activation
R457 T410 T420 themeOf TNFα,Synthesis
R458 T411 T421 themeOf RIP1,Activation

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T741 30-41 Protein denotes RIP1 Kinase
T744 1-4 Protein denotes TNF
T753 30-34 Protein denotes RIP1
T765 30-71 Positive_regulation denotes RIP1 Kinase Activation during Necroptosis
R435 T741 T765 themeOf RIP1 Kinase,RIP1 Kinase Activation during Necroptosis

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T489 1-5 NNP denotes TNFα
T490 6-15 NNP denotes Synthesis
T491 16-26 NNP denotes Downstream
T492 27-29 IN denotes of
T493 30-34 NNP denotes RIP1
T494 35-41 NNP denotes Kinase
T495 42-52 NNP denotes Activation
T496 53-59 IN denotes during
T497 60-71 NNP denotes Necroptosis
R229 T489 T491 compound TNFα,Downstream
R230 T490 T491 compound Synthesis,Downstream
R232 T492 T491 prep of,Downstream
R233 T493 T494 compound RIP1,Kinase
R234 T494 T495 compound Kinase,Activation
R235 T495 T492 pobj Activation,of

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T457 1-5 Protein denotes TNFα
T458 30-41 Protein denotes RIP1 Kinase
T459 6-15 Gene_expression denotes Synthesis
T460 42-52 Positive_regulation denotes Activation
R213 T457 T459 themeOf TNFα,Synthesis
R214 T458 T460 themeOf RIP1 Kinase,Activation

test3

Id Subject Object Predicate Lexical cue
T29 1-5 Protein denotes TNFα
T30 30-34 Protein denotes RIP1
T40 1-5 Protein denotes TNFα
T41 6-15 Gene_expression denotes Synthesis
T42 30-34 Protein denotes RIP1
R6 T40 T41 themeOf TNFα,Synthesis