PMC:3585731 / 12012-12165
Annnotations
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5103 | 109-116 | Positive_regulation | denotes | induced |
| T5102 | 23-32 | Negative_regulation | denotes | knockdown |
| T5064 | 138-142 | Protein | denotes | TNFα |
| T5063 | 58-62 | Protein | denotes | Akt2 |
| T5062 | 49-53 | Protein | denotes | Akt1 |
| R3496 | T5062 | T5102 | themeOf | Akt1,knockdown |
| R3497 | T5063 | T5102 | themeOf | Akt2,knockdown |
| R3498 | T5064 | T5103 | causeOf | TNFα,induced |
| R3518 | T5102 | T5103 | themeOf | knockdown,induced |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5821 | 151-152 | -RRB- | denotes | ) |
| T5820 | 149-151 | NN | denotes | 2C |
| T5819 | 144-148 | NN | denotes | Fig. |
| T5818 | 143-144 | -LRB- | denotes | ( |
| T5817 | 138-142 | NN | denotes | TNFα |
| T5816 | 134-137 | CC | denotes | and |
| T5815 | 125-133 | NN | denotes | zVAD.fmk |
| T5814 | 120-124 | CC | denotes | both |
| T5813 | 117-119 | IN | denotes | by |
| T5812 | 109-116 | VB | denotes | induced |
| T5811 | 97-108 | NN | denotes | necroptosis |
| T5810 | 92-96 | IN | denotes | from |
| T5809 | 86-91 | NN | denotes | cells |
| T5808 | 76-85 | VB | denotes | protected |
| T5807 | 69-75 | NN | denotes | siRNAs |
| T5806 | 63-68 | VB | denotes | using |
| T5805 | 58-62 | NN | denotes | Akt2 |
| T5804 | 54-57 | CC | denotes | and |
| T5803 | 49-53 | NN | denotes | Akt1 |
| T5802 | 40-48 | NN | denotes | isoforms |
| T5801 | 36-39 | NN | denotes | Akt |
| T5800 | 33-35 | IN | denotes | of |
| T5799 | 23-32 | NN | denotes | knockdown |
| T5798 | 10-22 | JJ | denotes | simultaneous |
| T5797 | 8-9 | -COMMA- | denotes | , |
| T5796 | 0-8 | RB | denotes | Secondly |
| R3849 | T5799 | T5798 | arg1Of | knockdown,simultaneous |
| R3850 | T5799 | T5800 | arg1Of | knockdown,of |
| R3851 | T5799 | T5808 | arg1Of | knockdown,protected |
| R3852 | T5802 | T5801 | arg1Of | isoforms,Akt |
| R3853 | T5803 | T5804 | arg1Of | Akt1,and |
| R3854 | T5804 | T5800 | arg2Of | and,of |
| R3855 | T5804 | T5802 | arg1Of | and,isoforms |
| R3856 | T5804 | T5806 | arg1Of | and,using |
| R3857 | T5805 | T5804 | arg2Of | Akt2,and |
| R3858 | T5807 | T5806 | arg2Of | siRNAs,using |
| R3859 | T5808 | T5796 | arg1Of | protected,Secondly |
| R3860 | T5808 | T5797 | arg1Of | protected,"," |
| R3861 | T5809 | T5808 | arg2Of | cells,protected |
| R3862 | T5809 | T5810 | arg1Of | cells,from |
| R3863 | T5811 | T5810 | arg2Of | necroptosis,from |
| R3864 | T5811 | T5812 | arg2Of | necroptosis,induced |
| R3865 | T5815 | T5816 | arg1Of | zVAD.fmk,and |
| R3866 | T5816 | T5812 | arg1Of | and,induced |
| R3867 | T5816 | T5813 | arg2Of | and,by |
| R3868 | T5816 | T5814 | arg1Of | and,both |
| R3869 | T5816 | T5818 | arg1Of | and,( |
| R3870 | T5817 | T5816 | arg2Of | TNFα,and |
| R3871 | T5820 | T5818 | arg2Of | 2C,( |
| R3872 | T5820 | T5819 | arg1Of | 2C,Fig. |
| R3873 | T5821 | T5818 | arg3Of | ),( |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5375 | 138-142 | Protein | denotes | TNFα |
| T5374 | 58-62 | Protein | denotes | Akt2 |
| T5373 | 49-53 | Protein | denotes | Akt1 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6500 | 36-39 | http://www.uniprot.org/uniprot/Q9Y243 | denotes | Akt |
| T6472 | 36-39 | http://www.uniprot.org/uniprot/P31751 | denotes | Akt |
| T6444 | 36-39 | http://www.uniprot.org/uniprot/P31749 | denotes | Akt |
| T6530 | 138-142 | http://www.uniprot.org/uniprot/P01375 | denotes | TNFα |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5414 | 97-108 | http://purl.obolibrary.org/obo/GO_0097528 | denotes | necroptosis |
| T5404 | 97-108 | http://purl.obolibrary.org/obo/GO_0070266 | denotes | necroptosis |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5513 | 86-91 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5288 | 0-153 | Sentence | denotes | Secondly, simultaneous knockdown of Akt isoforms Akt1 and Akt2 using siRNAs protected cells from necroptosis induced by both zVAD.fmk and TNFα (Fig. 2C). |
| T77 | 0-153 | Sentence | denotes | Secondly, simultaneous knockdown of Akt isoforms Akt1 and Akt2 using siRNAs protected cells from necroptosis induced by both zVAD.fmk and TNFα (Fig. 2C). |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5528 | 138-142 | Protein | denotes | TNFα |
| T5527 | 58-62 | Protein | denotes | Akt2 |
| T5526 | 49-53 | Protein | denotes | Akt1 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6413 | 23-32 | Negative_regulation | denotes | knockdown |
| T6387 | 138-142 | Protein | denotes | TNFα |
| T6386 | 58-62 | Protein | denotes | Akt2 |
| T6385 | 49-53 | Protein | denotes | Akt1 |
| R4400 | T6385 | T6413 | themeOf | Akt1,knockdown |
| R4401 | T6386 | T6413 | themeOf | Akt2,knockdown |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6697 | 23-32 | Negative_regulation | denotes | knockdown |
| T6696 | 109-116 | Positive_regulation | denotes | induced |
| T6668 | 138-142 | Protein | denotes | TNFα |
| T6667 | 58-62 | Protein | denotes | Akt2 |
| T6666 | 49-53 | Protein | denotes | Akt1 |
| R4480 | T6666 | T6697 | themeOf | Akt1,knockdown |
| R4481 | T6667 | T6697 | themeOf | Akt2,knockdown |
| R4482 | T6668 | T6696 | themeOf | TNFα,induced |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6576 | 69-75 | Negative_regulation | denotes | siRNAs |
| T6575 | 23-32 | Negative_regulation | denotes | knockdown |
| T6548 | 138-142 | Protein | denotes | TNFα |
| T6547 | 58-62 | Protein | denotes | Akt2 |
| T6546 | 49-53 | Protein | denotes | Akt1 |
| R4423 | T6546 | T6575 | themeOf | Akt1,knockdown |
| R4424 | T6546 | T6576 | themeOf | Akt1,siRNAs |
| R4425 | T6547 | T6575 | themeOf | Akt2,knockdown |
| R4426 | T6547 | T6576 | themeOf | Akt2,siRNAs |
| R4442 | T6576 | T6575 | themeOf | siRNAs,knockdown |
| R4443 | T6576 | T6575 | themeOf | siRNAs,knockdown |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7256 | 58-75 | Protein | denotes | Akt2 using siRNAs |
| T7249 | 138-142 | Protein | denotes | TNFα |
| T7233 | 36-53 | Protein | denotes | Akt isoforms Akt1 |
| T7217 | 86-91 | Entity | denotes | cells |
| T7215 | 144-147 | Protein | denotes | Fig |
| T7158 | 125-133 | Entity | denotes | zVAD.fmk |
| T7150 | 36-39 | Protein | denotes | Akt |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6756 | 76-85 | Gene_expression | denotes | protected |
| T6755 | 23-32 | Negative_regulation | denotes | knockdown |
| T6754 | 23-32 | Negative_regulation | denotes | knockdown |
| T6753 | 23-32 | Negative_regulation | denotes | knockdown |
| T6752 | 144-151 | Protein | denotes | Fig. 2C |
| T6751 | 138-142 | Protein | denotes | TNFα |
| T6750 | 125-133 | Protein | denotes | zVAD.fmk |
| T6749 | 58-62 | Protein | denotes | Akt2 |
| T6748 | 49-53 | Protein | denotes | Akt1 |
| T6747 | 36-39 | Protein | denotes | Akt |
| R4526 | T6747 | T6753 | themeOf | Akt,knockdown |
| R4527 | T6748 | T6754 | themeOf | Akt1,knockdown |
| R4528 | T6749 | T6755 | themeOf | Akt2,knockdown |
| R4530 | T6752 | T6756 | themeOf | Fig. 2C,protected |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5206 | 138-142 | Protein | denotes | TNFα |
| T5205 | 109-116 | Positive_regulation | denotes | induced |
| T5204 | 58-62 | Protein | denotes | Akt2 |
| T5203 | 49-53 | Protein | denotes | Akt1 |
| T5202 | 23-32 | Negative_regulation | denotes | knockdown |
| T5160 | 138-142 | Protein | denotes | TNFα |
| T5159 | 58-62 | Protein | denotes | Akt2 |
| T5158 | 49-53 | Protein | denotes | Akt1 |
| R3541 | T5202 | T5205 | themeOf | knockdown,induced |
| R3542 | T5203 | T5202 | themeOf | Akt1,knockdown |
| R3543 | T5204 | T5202 | themeOf | Akt2,knockdown |
| R3544 | T5206 | T5205 | causeOf | TNFα,induced |