PMC:3585731 / 1065-1240
Annnotations
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T28 | 89-99 | Gene_expression | denotes | production |
T20 | 84-88 | Protein | denotes | TNFα |
R4 | T20 | T28 | themeOf | TNFα,production |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T333 | 165-168 | JJ | denotes | new |
T332 | 157-164 | VB | denotes | provide |
T331 | 149-156 | NN | denotes | results |
T330 | 145-148 | PRP-DOLLAR- | denotes | our |
T329 | 143-144 | -COMMA- | denotes | , |
T328 | 136-143 | RB | denotes | Overall |
T327 | 129-134 | NN | denotes | death |
T326 | 124-128 | NN | denotes | cell |
T325 | 121-123 | TO | denotes | to |
T324 | 108-120 | VB | denotes | contributing |
T323 | 100-107 | IN | denotes | without |
T322 | 89-99 | NN | denotes | production |
T321 | 84-88 | NN | denotes | TNFα |
T320 | 61-83 | JJ | denotes | necroptosis-associated |
T319 | 56-60 | IN | denotes | over |
T318 | 48-55 | NN | denotes | control |
T317 | 38-47 | VB | denotes | exhibited |
T316 | 34-37 | NN | denotes | Akt |
T315 | 32-33 | -COMMA- | denotes | , |
T314 | 21-32 | NN | denotes | macrophages |
T313 | 17-20 | CC | denotes | and |
T312 | 5-16 | NN | denotes | fibroblasts |
T311 | 0-4 | NN | denotes | lung |
R169 | T312 | T311 | arg1Of | fibroblasts,lung |
R170 | T312 | T313 | arg1Of | fibroblasts,and |
R172 | T314 | T313 | arg2Of | macrophages,and |
R173 | T316 | T317 | arg1Of | Akt,exhibited |
R174 | T316 | T324 | arg1Of | Akt,contributing |
R176 | T317 | T315 | arg1Of | exhibited,"," |
R177 | T317 | T319 | arg1Of | exhibited,over |
R178 | T317 | T323 | arg1Of | exhibited,without |
R179 | T318 | T317 | arg2Of | control,exhibited |
R180 | T322 | T319 | arg2Of | production,over |
R181 | T322 | T320 | arg1Of | production,necroptosis-associated |
R182 | T322 | T321 | arg1Of | production,TNFα |
R183 | T324 | T323 | arg2Of | contributing,without |
R184 | T324 | T325 | arg1Of | contributing,to |
R185 | T327 | T325 | arg2Of | death,to |
R186 | T327 | T326 | arg1Of | death,cell |
R187 | T331 | T330 | arg1Of | results,our |
R188 | T331 | T332 | arg1Of | results,provide |
R189 | T332 | T328 | arg1Of | provide,Overall |
R190 | T332 | T329 | arg1Of | provide,"," |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T97 | 84-88 | Protein | denotes | TNFα |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T404 | 84-88 | http://www.uniprot.org/uniprot/P01375 | denotes | TNFα |
T399 | 34-37 | http://www.uniprot.org/uniprot/Q9Y243 | denotes | Akt |
T392 | 34-37 | http://www.uniprot.org/uniprot/P31751 | denotes | Akt |
T385 | 34-37 | http://www.uniprot.org/uniprot/P31749 | denotes | Akt |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T59 | 0-4 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T122 | 129-134 | http://purl.obolibrary.org/obo/GO_0016265 | denotes | death |
T119 | 124-134 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | cell death |
T113 | 61-72 | http://purl.obolibrary.org/obo/GO_0097528 | denotes | necroptosis |
T105 | 61-72 | http://purl.obolibrary.org/obo/GO_0070266 | denotes | necroptosis |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T139 | 124-128 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T152 | 84-88 | Protein | denotes | TNFα |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T362 | 84-88 | Protein | denotes | TNFα |
T369 | 89-99 | Gene_expression | denotes | production |
R454 | T362 | T369 | themeOf | TNFα,production |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T450 | 84-88 | Protein | denotes | TNFα |
T455 | 89-99 | Gene_expression | denotes | production |
R472 | T450 | T455 | themeOf | TNFα,production |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T427 | 61-83 | Positive_regulation | denotes | necroptosis-associated |
T426 | 89-99 | Gene_expression | denotes | production |
T419 | 84-88 | Protein | denotes | TNFα |
R211 | T426 | T427 | themeOf | production,necroptosis-associated |
R461 | T419 | T426 | themeOf | TNFα,production |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T759 | 61-99 | Gene_expression | denotes | necroptosis-associated TNFα production |
T755 | 21-33 | Entity | denotes | macrophages, |
T749 | 34-37 | Protein | denotes | Akt |
T747 | 84-88 | Protein | denotes | TNFα |
R436 | T747 | T759 | themeOf | TNFα,necroptosis-associated TNFα production |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T674 | 157-164 | VB | denotes | provide |
T673 | 149-156 | NNS | denotes | results |
T672 | 145-148 | PRP$ | denotes | our |
T671 | 143-144 | , | denotes | , |
T670 | 136-143 | RB | denotes | Overall |
T669 | 134-135 | . | denotes | . |
T668 | 129-134 | NN | denotes | death |
T667 | 124-128 | NN | denotes | cell |
T666 | 121-123 | TO | denotes | to |
T665 | 108-120 | VBG | denotes | contributing |
T664 | 100-107 | IN | denotes | without |
T663 | 89-99 | NN | denotes | production |
T662 | 84-88 | JJ | denotes | TNFα |
T661 | 61-83 | JJ | denotes | necroptosis-associated |
T660 | 56-60 | IN | denotes | over |
T659 | 48-55 | NN | denotes | control |
T658 | 38-47 | VBD | denotes | exhibited |
T657 | 34-37 | NNP | denotes | Akt |
T656 | 32-33 | , | denotes | , |
T655 | 21-32 | NNS | denotes | macrophages |
T654 | 17-20 | CC | denotes | and |
T653 | 5-16 | NNS | denotes | fibroblasts |
T652 | 0-4 | NN | denotes | lung |
T675 | 165-168 | JJ | denotes | new |
R392 | T652 | T653 | compound | lung,fibroblasts |
R394 | T654 | T653 | cc | and,fibroblasts |
R395 | T655 | T653 | conj | macrophages,fibroblasts |
R396 | T656 | T658 | punct | ",",exhibited |
R397 | T657 | T658 | nsubj | Akt,exhibited |
R398 | T658 | T658 | ROOT | exhibited,exhibited |
R399 | T659 | T658 | dobj | control,exhibited |
R400 | T660 | T659 | prep | over,control |
R401 | T661 | T663 | amod | necroptosis-associated,production |
R402 | T662 | T663 | compound | TNFα,production |
R403 | T663 | T660 | pobj | production,over |
R404 | T664 | T658 | prep | without,exhibited |
R405 | T665 | T664 | pcomp | contributing,without |
R406 | T666 | T665 | prep | to,contributing |
R407 | T667 | T668 | compound | cell,death |
R408 | T668 | T666 | pobj | death,to |
R409 | T669 | T658 | punct | .,exhibited |
R410 | T670 | T674 | advmod | Overall,provide |
R411 | T671 | T674 | punct | ",",provide |
R412 | T672 | T673 | poss | our,results |
R413 | T673 | T674 | nsubj | results,provide |
R414 | T674 | T674 | ROOT | provide,provide |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T484 | 48-55 | Regulation | denotes | control |
T483 | 89-99 | Gene_expression | denotes | production |
T482 | 84-88 | Protein | denotes | TNFα |
R224 | T482 | T483 | themeOf | TNFα,production |
R225 | T483 | T484 | themeOf | production,control |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T57 | 89-99 | Gene_expression | denotes | production |
T56 | 84-88 | Protein | denotes | TNFα |
T38 | 84-88 | Protein | denotes | TNFα |
R14 | T56 | T57 | themeOf | TNFα,production |