
PMC:3585731 / 1045-1346
Annnotations
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T28 | 109-119 | Gene_expression | denotes | production |
T20 | 104-108 | Protein | denotes | TNFα |
R4 | T20 | T28 | themeOf | TNFα,production |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T351 | 282-294 | JJ | denotes | inflammatory |
T350 | 278-281 | CC | denotes | and |
T349 | 272-277 | NN | denotes | death |
T348 | 267-271 | NN | denotes | cell |
T347 | 262-266 | DT | denotes | both |
T346 | 259-261 | IN | denotes | in |
T345 | 252-258 | NN | denotes | kinase |
T344 | 248-251 | NN | denotes | Akt |
T343 | 245-247 | IN | denotes | of |
T342 | 240-244 | NN | denotes | role |
T341 | 236-239 | DT | denotes | the |
T340 | 232-235 | CC | denotes | and |
T339 | 220-231 | NN | denotes | necroptosis |
T338 | 217-219 | IN | denotes | of |
T337 | 207-216 | NN | denotes | mechanism |
T336 | 203-206 | DT | denotes | the |
T335 | 198-202 | IN | denotes | into |
T334 | 189-197 | NN | denotes | insights |
T333 | 185-188 | JJ | denotes | new |
T332 | 177-184 | VB | denotes | provide |
T331 | 169-176 | NN | denotes | results |
T330 | 165-168 | PRP-DOLLAR- | denotes | our |
T329 | 163-164 | -COMMA- | denotes | , |
T328 | 156-163 | RB | denotes | Overall |
T327 | 149-154 | NN | denotes | death |
T326 | 144-148 | NN | denotes | cell |
T325 | 141-143 | TO | denotes | to |
T324 | 128-140 | VB | denotes | contributing |
T323 | 120-127 | IN | denotes | without |
T322 | 109-119 | NN | denotes | production |
T321 | 104-108 | NN | denotes | TNFα |
T320 | 81-103 | JJ | denotes | necroptosis-associated |
T319 | 76-80 | IN | denotes | over |
T318 | 68-75 | NN | denotes | control |
T317 | 58-67 | VB | denotes | exhibited |
T316 | 54-57 | NN | denotes | Akt |
T315 | 52-53 | -COMMA- | denotes | , |
T314 | 41-52 | NN | denotes | macrophages |
T313 | 37-40 | CC | denotes | and |
T312 | 25-36 | NN | denotes | fibroblasts |
T311 | 20-24 | NN | denotes | lung |
T310 | 14-19 | NN | denotes | mouse |
T309 | 11-13 | IN | denotes | as |
T308 | 6-10 | JJ | denotes | such |
T307 | 4-5 | -COMMA- | denotes | , |
R167 | T309 | T308 | arg1Of | as,such |
R168 | T312 | T310 | arg1Of | fibroblasts,mouse |
R169 | T312 | T311 | arg1Of | fibroblasts,lung |
R170 | T312 | T313 | arg1Of | fibroblasts,and |
R171 | T313 | T309 | arg2Of | and,as |
R172 | T314 | T313 | arg2Of | macrophages,and |
R173 | T316 | T317 | arg1Of | Akt,exhibited |
R174 | T316 | T324 | arg1Of | Akt,contributing |
R176 | T317 | T315 | arg1Of | exhibited,"," |
R177 | T317 | T319 | arg1Of | exhibited,over |
R178 | T317 | T323 | arg1Of | exhibited,without |
R179 | T318 | T317 | arg2Of | control,exhibited |
R180 | T322 | T319 | arg2Of | production,over |
R181 | T322 | T320 | arg1Of | production,necroptosis-associated |
R182 | T322 | T321 | arg1Of | production,TNFα |
R183 | T324 | T323 | arg2Of | contributing,without |
R184 | T324 | T325 | arg1Of | contributing,to |
R185 | T327 | T325 | arg2Of | death,to |
R186 | T327 | T326 | arg1Of | death,cell |
R187 | T331 | T330 | arg1Of | results,our |
R188 | T331 | T332 | arg1Of | results,provide |
R189 | T332 | T328 | arg1Of | provide,Overall |
R190 | T332 | T329 | arg1Of | provide,"," |
R191 | T332 | T346 | arg1Of | provide,in |
R192 | T334 | T332 | arg2Of | insights,provide |
R193 | T334 | T333 | arg1Of | insights,new |
R194 | T334 | T335 | arg1Of | insights,into |
R195 | T337 | T336 | arg1Of | mechanism,the |
R196 | T337 | T338 | arg1Of | mechanism,of |
R197 | T337 | T340 | arg1Of | mechanism,and |
R198 | T339 | T338 | arg2Of | necroptosis,of |
R199 | T340 | T335 | arg2Of | and,into |
R200 | T342 | T340 | arg2Of | role,and |
R201 | T342 | T341 | arg1Of | role,the |
R202 | T342 | T343 | arg1Of | role,of |
R203 | T345 | T343 | arg2Of | kinase,of |
R204 | T345 | T344 | arg1Of | kinase,Akt |
R205 | T349 | T348 | arg1Of | death,cell |
R206 | T349 | T350 | arg1Of | death,and |
R207 | T350 | T346 | arg2Of | and,in |
R208 | T350 | T347 | arg1Of | and,both |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T97 | 104-108 | Protein | denotes | TNFα |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T404 | 104-108 | http://www.uniprot.org/uniprot/P01375 | denotes | TNFα |
T400 | 248-251 | http://www.uniprot.org/uniprot/Q9Y243 | denotes | Akt |
T399 | 54-57 | http://www.uniprot.org/uniprot/Q9Y243 | denotes | Akt |
T393 | 248-251 | http://www.uniprot.org/uniprot/P31751 | denotes | Akt |
T392 | 54-57 | http://www.uniprot.org/uniprot/P31751 | denotes | Akt |
T385 | 54-57 | http://www.uniprot.org/uniprot/P31749 | denotes | Akt |
T386 | 248-251 | http://www.uniprot.org/uniprot/P31749 | denotes | Akt |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T59 | 20-24 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T123 | 272-277 | http://purl.obolibrary.org/obo/GO_0016265 | denotes | death |
T122 | 149-154 | http://purl.obolibrary.org/obo/GO_0016265 | denotes | death |
T120 | 267-277 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | cell death |
T119 | 144-154 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | cell death |
T114 | 220-231 | http://purl.obolibrary.org/obo/GO_0097528 | denotes | necroptosis |
T113 | 81-92 | http://purl.obolibrary.org/obo/GO_0097528 | denotes | necroptosis |
T106 | 220-231 | http://purl.obolibrary.org/obo/GO_0070266 | denotes | necroptosis |
T105 | 81-92 | http://purl.obolibrary.org/obo/GO_0070266 | denotes | necroptosis |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T140 | 267-271 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T139 | 144-148 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T152 | 104-108 | Protein | denotes | TNFα |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T362 | 104-108 | Protein | denotes | TNFα |
T369 | 109-119 | Gene_expression | denotes | production |
R454 | T362 | T369 | themeOf | TNFα,production |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T450 | 104-108 | Protein | denotes | TNFα |
T455 | 109-119 | Gene_expression | denotes | production |
R472 | T450 | T455 | themeOf | TNFα,production |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T427 | 81-103 | Positive_regulation | denotes | necroptosis-associated |
T426 | 109-119 | Gene_expression | denotes | production |
T419 | 104-108 | Protein | denotes | TNFα |
R211 | T426 | T427 | themeOf | production,necroptosis-associated |
R461 | T419 | T426 | themeOf | TNFα,production |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T759 | 81-119 | Gene_expression | denotes | necroptosis-associated TNFα production |
T755 | 41-53 | Entity | denotes | macrophages, |
T754 | 245-258 | Protein | denotes | of Akt kinase |
T749 | 54-57 | Protein | denotes | Akt |
T747 | 104-108 | Protein | denotes | TNFα |
T727 | 248-251 | Protein | denotes | Akt |
R436 | T747 | T759 | themeOf | TNFα,necroptosis-associated TNFα production |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T674 | 177-184 | VB | denotes | provide |
T673 | 169-176 | NNS | denotes | results |
T672 | 165-168 | PRP$ | denotes | our |
T671 | 163-164 | , | denotes | , |
T670 | 156-163 | RB | denotes | Overall |
T669 | 154-155 | . | denotes | . |
T668 | 149-154 | NN | denotes | death |
T667 | 144-148 | NN | denotes | cell |
T666 | 141-143 | TO | denotes | to |
T665 | 128-140 | VBG | denotes | contributing |
T664 | 120-127 | IN | denotes | without |
T663 | 109-119 | NN | denotes | production |
T662 | 104-108 | JJ | denotes | TNFα |
T661 | 81-103 | JJ | denotes | necroptosis-associated |
T660 | 76-80 | IN | denotes | over |
T659 | 68-75 | NN | denotes | control |
T658 | 58-67 | VBD | denotes | exhibited |
T657 | 54-57 | NNP | denotes | Akt |
T656 | 52-53 | , | denotes | , |
T655 | 41-52 | NNS | denotes | macrophages |
T654 | 37-40 | CC | denotes | and |
T653 | 25-36 | NNS | denotes | fibroblasts |
T652 | 20-24 | NN | denotes | lung |
T651 | 14-19 | NN | denotes | mouse |
T650 | 11-13 | IN | denotes | as |
T649 | 6-10 | JJ | denotes | such |
T648 | 4-5 | , | denotes | , |
T675 | 185-188 | JJ | denotes | new |
T676 | 189-197 | NNS | denotes | insights |
T677 | 198-202 | IN | denotes | into |
T678 | 203-206 | DT | denotes | the |
T679 | 207-216 | NN | denotes | mechanism |
T680 | 217-219 | IN | denotes | of |
T681 | 220-231 | NN | denotes | necroptosis |
T682 | 232-235 | CC | denotes | and |
T683 | 236-239 | DT | denotes | the |
T684 | 240-244 | NN | denotes | role |
T685 | 245-247 | IN | denotes | of |
T686 | 248-251 | NNP | denotes | Akt |
T687 | 252-258 | NN | denotes | kinase |
T688 | 259-261 | IN | denotes | in |
T689 | 262-266 | DT | denotes | both |
T690 | 267-271 | NN | denotes | cell |
T691 | 272-277 | NN | denotes | death |
T692 | 278-281 | CC | denotes | and |
T693 | 282-294 | JJ | denotes | inflammatory |
R389 | T649 | T650 | amod | such,as |
R391 | T651 | T653 | compound | mouse,fibroblasts |
R392 | T652 | T653 | compound | lung,fibroblasts |
R393 | T653 | T650 | pobj | fibroblasts,as |
R483 | T684 | T676 | conj | role,insights |
R484 | T685 | T684 | prep | of,role |
R485 | T686 | T687 | compound | Akt,kinase |
R486 | T687 | T685 | pobj | kinase,of |
R487 | T688 | T684 | prep | in,role |
R488 | T689 | T691 | det | both,death |
R489 | T690 | T691 | compound | cell,death |
R490 | T691 | T688 | pobj | death,in |
R491 | T692 | T691 | cc | and,death |
R394 | T654 | T653 | cc | and,fibroblasts |
R395 | T655 | T653 | conj | macrophages,fibroblasts |
R396 | T656 | T658 | punct | ",",exhibited |
R397 | T657 | T658 | nsubj | Akt,exhibited |
R398 | T658 | T658 | ROOT | exhibited,exhibited |
R399 | T659 | T658 | dobj | control,exhibited |
R400 | T660 | T659 | prep | over,control |
R401 | T661 | T663 | amod | necroptosis-associated,production |
R402 | T662 | T663 | compound | TNFα,production |
R403 | T663 | T660 | pobj | production,over |
R404 | T664 | T658 | prep | without,exhibited |
R405 | T665 | T664 | pcomp | contributing,without |
R406 | T666 | T665 | prep | to,contributing |
R407 | T667 | T668 | compound | cell,death |
R408 | T668 | T666 | pobj | death,to |
R409 | T669 | T658 | punct | .,exhibited |
R410 | T670 | T674 | advmod | Overall,provide |
R411 | T671 | T674 | punct | ",",provide |
R412 | T672 | T673 | poss | our,results |
R413 | T673 | T674 | nsubj | results,provide |
R414 | T674 | T674 | ROOT | provide,provide |
R474 | T675 | T676 | amod | new,insights |
R475 | T676 | T674 | dobj | insights,provide |
R476 | T677 | T676 | prep | into,insights |
R477 | T678 | T679 | det | the,mechanism |
R478 | T679 | T677 | pobj | mechanism,into |
R479 | T680 | T679 | prep | of,mechanism |
R480 | T681 | T680 | pobj | necroptosis,of |
R481 | T682 | T676 | cc | and,insights |
R482 | T683 | T684 | det | the,role |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T485 | 248-258 | Protein | denotes | Akt kinase |
T484 | 68-75 | Regulation | denotes | control |
T483 | 109-119 | Gene_expression | denotes | production |
T482 | 104-108 | Protein | denotes | TNFα |
R224 | T482 | T483 | themeOf | TNFα,production |
R225 | T483 | T484 | themeOf | production,control |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T57 | 109-119 | Gene_expression | denotes | production |
T56 | 104-108 | Protein | denotes | TNFα |
T38 | 104-108 | Protein | denotes | TNFα |
R14 | T56 | T57 | themeOf | TNFα,production |