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PMC:3585731 / 10172-11117 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T5098 921-928 Positive_regulation denotes induced
T5097 767-777 Negative_regulation denotes inhibition
T5096 485-495 Negative_regulation denotes Inhibition
T5095 277-286 Negative_regulation denotes inhibitor
T5094 254-264 Negative_regulation denotes Inhibition
T5093 199-208 Positive_regulation denotes following
T5092 189-198 Positive_regulation denotes activated
T5061 916-920 Protein denotes TNFα
T5060 698-702 Protein denotes TNFα
T5059 578-582 Protein denotes TNFα
T5058 431-436 Protein denotes IGF-1
T5057 423-427 Protein denotes bFGF
R3516 T5092 T5093 themeOf activated,following

2_test

Id Subject Object Predicate Lexical cue
23469174-19556857-90505428 384-386 19556857 denotes 16
23469174-17560373-90505429 743-745 17560373 denotes 12
23469174-15131264-90505430 749-751 15131264 denotes 14
23469174-15131264-90505431 871-873 15131264 denotes 14

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5584 144-148 NN denotes MAPK
T5583 134-143 VB denotes including
T5582 132-133 -COMMA- denotes ,
T5581 124-132 NN denotes pathways
T5580 116-123 JJ denotes several
T5579 113-115 IN denotes of
T5578 100-112 NN denotes contribution
T5577 96-99 DT denotes the
T5576 87-95 VB denotes examined
T5575 84-86 PRP denotes we
T5574 82-83 -COMMA- denotes ,
T5573 77-82 NN denotes death
T5572 69-76 VB denotes induced
T5571 60-68 NN denotes zVAD.fmk
T5570 56-59 IN denotes for
T5569 46-55 JJ denotes important
T5568 42-45 VB denotes are
T5567 34-41 NN denotes factors
T5566 27-33 NN denotes growth
T5565 22-26 IN denotes that
T5564 10-21 NN denotes observation
T5563 6-9 PRP-DOLLAR- denotes our
T5562 0-5 VB denotes Given
T5736 943-944 -RRB- denotes )
T5735 941-943 NN denotes 2A
T5734 936-940 NN denotes Fig.
T5733 935-936 -LRB- denotes (
T5732 929-934 NN denotes death
T5731 921-928 VB denotes induced
T5730 916-920 NN denotes TNFα
T5729 913-915 CC denotes or
T5728 904-912 NN denotes zVAD.fmk
T5727 897-903 CC denotes either
T5726 892-896 IN denotes from
T5725 884-891 VB denotes protect
T5724 880-883 RB denotes not
T5723 876-879 VB denotes did
T5722 874-875 -COMMA- denotes ,
T5721 873-874 -RRB- denotes ]
T5720 871-873 CD denotes 14
T5719 870-871 -LRB- denotes [
T5718 858-869 NN denotes necroptosis
T5717 851-857 IN denotes during
T5716 841-850 VB denotes activated
T5715 838-840 VB denotes be
T5714 835-837 TO denotes to
T5713 831-834 RB denotes not
T5712 822-830 VB denotes reported
T5711 811-821 RB denotes previously
T5710 809-810 -COMMA- denotes ,
T5709 806-809 NN denotes ERK
T5708 802-805 CC denotes and
T5707 798-801 NN denotes p38
T5706 796-797 -COMMA- denotes ,
T5705 791-796 NN denotes MAPKs
T5704 785-790 JJ denotes other
T5703 781-784 CD denotes two
T5702 778-780 IN denotes of
T5701 767-777 NN denotes inhibition
T5700 765-766 -COMMA- denotes ,
T5699 757-765 NN denotes contrast
T5698 754-756 IN denotes In
T5697 751-752 -RRB- denotes ]
T5696 749-751 CD denotes 14
T5695 748-749 -LRB- denotes [
T5694 746-747 -COMMA- denotes ,
T5693 745-746 -RRB- denotes ]
T5692 743-745 CD denotes 12
T5691 742-743 -LRB- denotes [
T5690 740-741 -RRB- denotes )
T5689 737-740 NN denotes S2A
T5688 732-736 NNP denotes Fig.
T5687 728-731 CC denotes and
T5686 726-727 NN denotes B
T5685 725-726 -COMMA- denotes ,
T5684 723-725 NN denotes 2A
T5683 718-722 NNP denotes Fig.
T5682 717-718 -LRB- denotes (
T5681 711-716 NN denotes death
T5680 703-710 VB denotes induced
T5679 698-702 NN denotes TNFα
T5678 694-697 CC denotes and
T5677 685-693 NN denotes zVAD.fmk
T5676 680-684 CC denotes both
T5675 675-679 IN denotes from
T5674 669-674 NN denotes cells
T5673 665-668 DT denotes the
T5672 655-664 VB denotes protected
T5671 646-654 NN denotes SP600125
T5670 636-645 NN denotes inhibitor
T5669 632-635 NN denotes JNK
T5668 628-631 DT denotes the
T5667 626-627 -COMMA- denotes ,
T5666 619-626 NN denotes reports
T5665 610-618 JJ denotes previous
T5664 605-609 IN denotes with
T5663 594-604 JJ denotes Consistent
T5662 591-592 -RRB- denotes )
T5661 589-591 NN denotes 2A
T5660 584-588 NN denotes Fig.
T5659 583-584 -LRB- denotes (
T5658 578-582 NN denotes TNFα
T5657 575-577 IN denotes by
T5656 568-574 VB denotes caused
T5655 565-567 IN denotes by
T5654 559-564 NN denotes death
T5653 547-558 JJ denotes insensitive
T5652 533-546 NN denotes growth-factor
T5651 528-532 IN denotes from
T5650 522-527 NN denotes cells
T5649 518-521 DT denotes the
T5648 508-517 VB denotes protected
T5647 503-507 RB denotes also
T5646 499-502 NN denotes Akt
T5645 496-498 IN denotes of
T5644 485-495 NN denotes Inhibition
T5643 482-483 -RRB- denotes )
T5642 480-482 NN denotes 2B
T5641 475-479 NN denotes Fig.
T5640 474-475 -LRB- denotes (
T5639 463-473 NN denotes conditions
T5638 458-462 JJ denotes free
T5637 452-457 NN denotes serum
T5636 446-451 IN denotes under
T5635 431-445 NN denotes IGF-1/zVAD.fmk
T5634 428-430 CC denotes or
T5633 423-427 NN denotes bFGF
T5632 420-422 IN denotes by
T5631 410-419 VB denotes triggered
T5630 404-409 NN denotes death
T5629 399-403 NN denotes cell
T5628 396-398 IN denotes as
T5627 391-395 RB denotes well
T5626 388-390 RB denotes as
T5625 386-387 -RRB- denotes ]
T5624 384-386 CD denotes 16
T5623 383-384 -LRB- denotes [
T5622 374-382 NN denotes zVAD.fmk
T5621 371-373 IN denotes by
T5620 363-370 VB denotes induced
T5619 351-362 NN denotes necroptosis
T5618 334-350 JJ denotes factor-sensitive
T5617 327-333 NN denotes growth
T5616 322-326 IN denotes from
T5615 316-321 NN denotes cells
T5614 312-315 DT denotes the
T5613 302-311 VB denotes protected
T5612 293-301 RB denotes strongly
T5611 291-292 -RRB- denotes )
T5610 287-291 CD denotes VIII
T5609 277-286 NN denotes inhibitor
T5608 273-276 NN denotes Akt
T5607 272-273 -LRB- denotes (
T5606 268-271 NN denotes Akt
T5605 265-267 IN denotes of
T5604 254-264 NN denotes Inhibition
T5603 251-252 -RRB- denotes )
T5602 249-251 NN denotes 2A
T5601 244-248 NN denotes Fig.
T5600 243-244 -LRB- denotes (
T5599 232-242 NN denotes activation
T5598 223-231 NN denotes receptor
T5597 216-222 NN denotes factor
T5596 209-215 NN denotes growth
T5595 199-208 VB denotes following
T5594 189-198 VB denotes activated
T5593 186-188 VB denotes be
T5592 183-185 TO denotes to
T5591 177-182 VB denotes known
T5590 173-176 VB denotes are
T5589 167-172 WDT denotes which
T5588 165-166 -COMMA- denotes ,
T5587 162-165 NN denotes Akt
T5586 158-161 CC denotes and
T5585 149-157 NN denotes pathways
R3614 T5564 T5562 arg2Of observation,Given
R3615 T5564 T5563 arg1Of observation,our
R3616 T5567 T5566 arg1Of factors,growth
R3617 T5567 T5568 arg1Of factors,are
R3618 T5567 T5569 arg1Of factors,important
R3619 T5568 T5570 arg1Of are,for
R3620 T5569 T5568 arg2Of important,are
R3621 T5570 T5564 arg2Of for,observation
R3622 T5570 T5565 arg1Of for,that
R3623 T5571 T5572 arg1Of zVAD.fmk,induced
R3624 T5572 T5570 arg2Of induced,for
R3625 T5573 T5572 arg2Of death,induced
R3626 T5575 T5576 arg1Of we,examined
R3627 T5576 T5562 arg1Of examined,Given
R3628 T5576 T5574 arg1Of examined,","
R3629 T5578 T5576 arg2Of contribution,examined
R3630 T5578 T5577 arg1Of contribution,the
R3631 T5578 T5579 arg1Of contribution,of
R3632 T5581 T5579 arg2Of pathways,of
R3633 T5581 T5580 arg1Of pathways,several
R3634 T5581 T5582 arg1Of pathways,","
R3635 T5581 T5583 arg1Of pathways,including
R3636 T5585 T5584 arg1Of pathways,MAPK
R3637 T5585 T5586 arg1Of pathways,and
R3638 T5586 T5583 arg2Of and,including
R3639 T5586 T5588 arg1Of and,","
R3640 T5586 T5589 arg1Of and,which
R3641 T5586 T5590 arg1Of and,are
R3642 T5586 T5591 arg2Of and,known
R3643 T5586 T5593 arg1Of and,be
R3644 T5586 T5594 arg2Of and,activated
R3645 T5587 T5586 arg2Of Akt,and
R3646 T5591 T5590 arg2Of known,are
R3647 T5594 T5591 arg3Of activated,known
R3648 T5594 T5592 arg1Of activated,to
R3649 T5594 T5593 arg2Of activated,be
R3650 T5594 T5595 arg1Of activated,following
R3651 T5599 T5595 arg2Of activation,following
R3652 T5599 T5596 arg1Of activation,growth
R3653 T5599 T5597 arg1Of activation,factor
R3654 T5599 T5598 arg1Of activation,receptor
R3655 T5599 T5600 arg1Of activation,(
R3656 T5602 T5600 arg2Of 2A,(
R3657 T5602 T5601 arg1Of 2A,Fig.
R3658 T5603 T5600 arg3Of ),(
R3659 T5604 T5605 arg1Of Inhibition,of
R3660 T5604 T5613 arg1Of Inhibition,protected
R3661 T5606 T5605 arg2Of Akt,of
R3662 T5606 T5607 arg1Of Akt,(
R3663 T5609 T5607 arg2Of inhibitor,(
R3664 T5609 T5608 arg1Of inhibitor,Akt
R3665 T5609 T5610 arg1Of inhibitor,VIII
R3666 T5611 T5607 arg3Of ),(
R3667 T5613 T5612 arg1Of protected,strongly
R3668 T5615 T5613 arg2Of cells,protected
R3669 T5615 T5614 arg1Of cells,the
R3670 T5615 T5616 arg1Of cells,from
R3671 T5619 T5617 arg1Of necroptosis,growth
R3672 T5619 T5618 arg1Of necroptosis,factor-sensitive
R3673 T5619 T5620 arg2Of necroptosis,induced
R3674 T5619 T5628 arg1Of necroptosis,as
R3675 T5620 T5623 arg1Of induced,[
R3676 T5622 T5620 arg1Of zVAD.fmk,induced
R3677 T5622 T5621 arg2Of zVAD.fmk,by
R3678 T5624 T5623 arg2Of 16,[
R3679 T5625 T5623 arg3Of ],[
R3680 T5628 T5616 arg2Of as,from
R3681 T5628 T5626 arg1Of as,as
R3682 T5628 T5627 arg1Of as,well
R3683 T5630 T5628 arg2Of death,as
R3684 T5630 T5629 arg1Of death,cell
R3685 T5630 T5631 arg2Of death,triggered
R3686 T5631 T5636 arg1Of triggered,under
R3687 T5633 T5634 arg1Of bFGF,or
R3688 T5634 T5631 arg1Of or,triggered
R3689 T5634 T5632 arg2Of or,by
R3690 T5635 T5634 arg2Of IGF-1/zVAD.fmk,or
R3691 T5639 T5636 arg2Of conditions,under
R3692 T5639 T5637 arg1Of conditions,serum
R3693 T5639 T5638 arg1Of conditions,free
R3694 T5639 T5640 arg1Of conditions,(
R3695 T5642 T5640 arg2Of 2B,(
R3696 T5642 T5641 arg1Of 2B,Fig.
R3697 T5643 T5640 arg3Of ),(
R3698 T5644 T5645 arg1Of Inhibition,of
R3699 T5644 T5648 arg1Of Inhibition,protected
R3700 T5646 T5645 arg2Of Akt,of
R3701 T5648 T5647 arg1Of protected,also
R3702 T5650 T5648 arg2Of cells,protected
R3703 T5650 T5649 arg1Of cells,the
R3704 T5650 T5651 arg1Of cells,from
R3705 T5650 T5656 arg2Of cells,caused
R3706 T5654 T5651 arg2Of death,from
R3707 T5654 T5652 arg1Of death,growth-factor
R3708 T5654 T5653 arg1Of death,insensitive
R3709 T5654 T5655 arg1Of death,by
R3710 T5658 T5656 arg1Of TNFα,caused
R3711 T5658 T5657 arg2Of TNFα,by
R3712 T5658 T5659 arg1Of TNFα,(
R3713 T5661 T5659 arg2Of 2A,(
R3714 T5661 T5660 arg1Of 2A,Fig.
R3715 T5662 T5659 arg3Of ),(
R3716 T5663 T5664 arg1Of Consistent,with
R3717 T5666 T5664 arg2Of reports,with
R3718 T5666 T5665 arg1Of reports,previous
R3719 T5671 T5663 arg1Of SP600125,Consistent
R3720 T5671 T5668 arg1Of SP600125,the
R3721 T5671 T5669 arg1Of SP600125,JNK
R3722 T5671 T5670 arg1Of SP600125,inhibitor
R3723 T5671 T5672 arg1Of SP600125,protected
R3724 T5672 T5678 arg1Of protected,and
R3725 T5674 T5672 arg2Of cells,protected
R3726 T5674 T5673 arg1Of cells,the
R3727 T5674 T5675 arg1Of cells,from
R3728 T5677 T5675 arg2Of zVAD.fmk,from
R3729 T5677 T5676 arg1Of zVAD.fmk,both
R3730 T5678 T5663 modOf and,Consistent
R3731 T5678 T5667 arg1Of and,","
R3732 T5679 T5680 arg1Of TNFα,induced
R3733 T5680 T5678 arg2Of induced,and
R3734 T5680 T5691 arg1Of induced,[
R3735 T5680 T5694 arg1Of induced,","
R3736 T5680 T5695 arg1Of induced,[
R3737 T5681 T5680 arg2Of death,induced
R3738 T5681 T5682 arg1Of death,(
R3739 T5684 T5685 arg1Of 2A,","
R3740 T5685 T5687 arg1Of ",",and
R3741 T5686 T5685 arg2Of B,","
R3742 T5687 T5682 arg2Of and,(
R3743 T5687 T5683 arg1Of and,Fig.
R3744 T5689 T5687 arg2Of S2A,and
R3745 T5689 T5688 arg1Of S2A,Fig.
R3746 T5690 T5682 arg3Of ),(
R3747 T5692 T5691 arg2Of 12,[
R3748 T5693 T5691 arg3Of ],[
R3749 T5696 T5695 arg2Of 14,[
R3750 T5697 T5695 arg3Of ],[
R3751 T5699 T5698 arg2Of contrast,In
R3752 T5701 T5702 arg1Of inhibition,of
R3753 T5701 T5725 arg2Of inhibition,protect
R3754 T5701 T5731 arg1Of inhibition,induced
R3755 T5705 T5702 arg2Of MAPKs,of
R3756 T5705 T5703 arg1Of MAPKs,two
R3757 T5705 T5704 arg1Of MAPKs,other
R3758 T5705 T5706 arg1Of MAPKs,","
R3759 T5705 T5710 arg1Of MAPKs,","
R3760 T5705 T5712 arg2Of MAPKs,reported
R3761 T5707 T5708 arg1Of p38,and
R3762 T5708 T5706 arg2Of and,","
R3763 T5709 T5708 arg2Of ERK,and
R3764 T5712 T5711 arg1Of reported,previously
R3765 T5716 T5713 arg1Of activated,not
R3766 T5716 T5714 arg1Of activated,to
R3767 T5716 T5715 arg2Of activated,be
R3768 T5716 T5717 arg1Of activated,during
R3769 T5716 T5723 arg1Of activated,did
R3770 T5716 T5725 arg1Of activated,protect
R3771 T5718 T5717 arg2Of necroptosis,during
R3772 T5718 T5719 arg1Of necroptosis,[
R3773 T5720 T5719 arg2Of 14,[
R3774 T5721 T5719 arg3Of ],[
R3775 T5725 T5722 arg1Of protect,","
R3776 T5725 T5723 arg2Of protect,did
R3777 T5725 T5724 arg1Of protect,not
R3778 T5725 T5726 arg1Of protect,from
R3779 T5728 T5729 arg1Of zVAD.fmk,or
R3780 T5729 T5726 arg2Of or,from
R3781 T5729 T5727 arg1Of or,either
R3782 T5730 T5729 arg2Of TNFα,or
R3783 T5731 T5698 arg1Of induced,In
R3784 T5731 T5700 arg1Of induced,","
R3785 T5732 T5731 arg2Of death,induced
R3786 T5732 T5733 arg1Of death,(
R3787 T5735 T5733 arg2Of 2A,(
R3788 T5735 T5734 arg1Of 2A,Fig.
R3789 T5736 T5733 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T5372 916-920 Protein denotes TNFα
T5371 698-702 Protein denotes TNFα
T5370 578-582 Protein denotes TNFα
T5369 431-436 Protein denotes IGF-1
T5368 423-427 Protein denotes bFGF

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6496 499-502 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T6495 273-276 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T6494 268-271 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T6493 162-165 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T6468 499-502 http://www.uniprot.org/uniprot/P31751 denotes Akt
T6467 273-276 http://www.uniprot.org/uniprot/P31751 denotes Akt
T6466 268-271 http://www.uniprot.org/uniprot/P31751 denotes Akt
T6465 162-165 http://www.uniprot.org/uniprot/P31751 denotes Akt
T6440 499-502 http://www.uniprot.org/uniprot/P31749 denotes Akt
T6439 273-276 http://www.uniprot.org/uniprot/P31749 denotes Akt
T6438 268-271 http://www.uniprot.org/uniprot/P31749 denotes Akt
T6437 162-165 http://www.uniprot.org/uniprot/P31749 denotes Akt
T6520 423-427 http://www.uniprot.org/uniprot/Q788Q8 denotes bFGF
T6529 916-920 http://www.uniprot.org/uniprot/P01375 denotes TNFα
T6528 698-702 http://www.uniprot.org/uniprot/P01375 denotes TNFα
T6527 578-582 http://www.uniprot.org/uniprot/P01375 denotes TNFα

UBERON-AE

Id Subject Object Predicate Lexical cue
T5277 452-457 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum

GO-BP

Id Subject Object Predicate Lexical cue
T5446 632-635 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK
T5440 399-409 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death
T5439 806-809 http://purl.obolibrary.org/obo/GO_0004707 denotes ERK
T5438 798-801 http://purl.obolibrary.org/obo/GO_0004707 denotes p38
T5437 144-148 http://purl.obolibrary.org/obo/GO_0004707 denotes MAPK
T5431 929-934 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T5430 711-716 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T5429 559-564 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T5428 404-409 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T5427 77-82 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T5424 533-539 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T5423 327-333 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T5422 209-215 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T5421 27-33 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T5413 858-869 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T5412 351-362 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T5403 858-869 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis
T5402 351-362 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis

GO-MF

Id Subject Object Predicate Lexical cue
T5494 632-635 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK
T5493 209-231 http://purl.obolibrary.org/obo/GO_0070851 denotes growth factor receptor
T5492 806-809 http://purl.obolibrary.org/obo/GO_0004707 denotes ERK
T5491 798-801 http://purl.obolibrary.org/obo/GO_0004707 denotes p38
T5490 144-148 http://purl.obolibrary.org/obo/GO_0004707 denotes MAPK

GO-CC

Id Subject Object Predicate Lexical cue
T5512 669-674 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T5511 522-527 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T5510 316-321 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T5285 754-945 Sentence denotes In contrast, inhibition of two other MAPKs, p38 and ERK, previously reported not to be activated during necroptosis [14], did not protect from either zVAD.fmk or TNFα induced death (Fig. 2A).
T5284 594-753 Sentence denotes Consistent with previous reports, the JNK inhibitor SP600125 protected the cells from both zVAD.fmk and TNFα induced death (Fig. 2A,B and Fig. S2A) [12], [14].
T5283 485-593 Sentence denotes Inhibition of Akt also protected the cells from growth-factor insensitive death by caused by TNFα (Fig. 2A).
T5282 254-484 Sentence denotes Inhibition of Akt (Akt inhibitor VIII) strongly protected the cells from growth factor-sensitive necroptosis induced by zVAD.fmk [16] as well as cell death triggered by bFGF or IGF-1/zVAD.fmk under serum free conditions (Fig. 2B).
T5281 0-253 Sentence denotes Given our observation that growth factors are important for zVAD.fmk induced death, we examined the contribution of several pathways, including MAPK pathways and Akt, which are known to be activated following growth factor receptor activation (Fig. 2A).
T65 0-253 Sentence denotes Given our observation that growth factors are important for zVAD.fmk induced death, we examined the contribution of several pathways, including MAPK pathways and Akt, which are known to be activated following growth factor receptor activation (Fig. 2A).
T66 254-484 Sentence denotes Inhibition of Akt (Akt inhibitor VIII) strongly protected the cells from growth factor-sensitive necroptosis induced by zVAD.fmk [16] as well as cell death triggered by bFGF or IGF-1/zVAD.fmk under serum free conditions (Fig. 2B).
T67 485-593 Sentence denotes Inhibition of Akt also protected the cells from growth-factor insensitive death by caused by TNFα (Fig. 2A).
T68 594-753 Sentence denotes Consistent with previous reports, the JNK inhibitor SP600125 protected the cells from both zVAD.fmk and TNFα induced death (Fig. 2A,B and Fig. S2A) [12], [14].
T69 754-945 Sentence denotes In contrast, inhibition of two other MAPKs, p38 and ERK, previously reported not to be activated during necroptosis [14], did not protect from either zVAD.fmk or TNFα induced death (Fig. 2A).

simple1

Id Subject Object Predicate Lexical cue
T5525 916-920 Protein denotes TNFα
T5524 698-702 Protein denotes TNFα
T5523 578-582 Protein denotes TNFα
T5522 431-436 Protein denotes IGF-1
T5521 423-427 Protein denotes bFGF

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T6382 578-582 Protein denotes TNFα
T6381 431-436 Protein denotes IGF-1
T6380 423-427 Protein denotes bFGF
T6384 916-920 Protein denotes TNFα
T6383 698-702 Protein denotes TNFα

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6695 921-928 Positive_regulation denotes induced
T6665 916-920 Protein denotes TNFα
T6664 698-702 Protein denotes TNFα
T6663 578-582 Protein denotes TNFα
T6662 431-436 Protein denotes IGF-1
T6661 423-427 Protein denotes bFGF
R4479 T6665 T6695 themeOf TNFα,induced

DLUT931

Id Subject Object Predicate Lexical cue
T6574 921-928 Positive_regulation denotes induced
T6545 916-920 Protein denotes TNFα
T6544 698-702 Protein denotes TNFα
T6543 578-582 Protein denotes TNFα
T6542 431-436 Protein denotes IGF-1
T6541 423-427 Protein denotes bFGF
R4422 T6545 T6574 themeOf TNFα,induced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T7302 189-242 Positive_regulation denotes activated following growth factor receptor activation
T7293 254-292 Negative_regulation denotes Inhibition of Akt (Akt inhibitor VIII)
T7291 485-502 Negative_regulation denotes Inhibition of Akt
T7282 767-796 Negative_regulation denotes inhibition of two other MAPKs
T7275 698-702 Protein denotes TNFα
T7274 475-478 Protein denotes Fig
T7272 916-920 Protein denotes TNFα
T7271 496-502 Protein denotes of Akt
T7268 265-271 Protein denotes of Akt
T7265 223-231 Protein denotes receptor
T7264 312-387 Entity denotes the cells from growth factor-sensitive necroptosis induced by zVAD.fmk [16]
T7262 273-291 Entity denotes Akt inhibitor VIII
T7260 685-693 Entity denotes zVAD.fmk
T7259 732-735 Protein denotes Fig
T7250 798-801 Protein denotes p38
T7239 533-558 Protein denotes growth-factor insensitive
T7238 144-157 Protein denotes MAPK pathways
T7234 423-427 Protein denotes bFGF
T7226 636-654 Entity denotes inhibitor SP600125
T7225 244-247 Protein denotes Fig
T7224 778-796 Protein denotes of two other MAPKs
T7221 575-592 Protein denotes by TNFα (Fig. 2A)
T7207 327-350 Protein denotes growth factor-sensitive
T7203 518-527 Entity denotes the cells
T7194 162-165 Protein denotes Akt
T7191 904-912 Entity denotes zVAD.fmk
T7187 806-874 Protein denotes ERK, previously reported not to be activated during necroptosis [14]
T7183 628-635 Protein denotes the JNK
T7182 371-387 Entity denotes by zVAD.fmk [16]
T7169 6-68 Entity denotes our observation that growth factors are important for zVAD.fmk
T7155 636-645 Entity denotes inhibitor
T7151 665-674 Entity denotes the cells
R4743 T7224 T7282 themeOf of two other MAPKs,inhibition of two other MAPKs
R4763 T7265 T7302 themeOf receptor,activated following growth factor receptor activation
R4766 T7268 T7293 themeOf of Akt,Inhibition of Akt (Akt inhibitor VIII)
R4768 T7271 T7291 themeOf of Akt,Inhibition of Akt

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T6736 767-777 Negative_regulation denotes inhibition
T6735 767-777 Negative_regulation denotes inhibition
T6734 904-920 Protein denotes zVAD.fmk or TNFα
T6733 806-809 Protein denotes ERK
T6732 798-801 Protein denotes p38
T6731 737-740 Protein denotes S2A
T6730 732-735 Protein denotes Fig
T6729 718-727 Protein denotes Fig. 2A,B
T6728 698-702 Protein denotes TNFα
T6727 685-693 Protein denotes zVAD.fmk
T6726 632-635 Protein denotes JNK
T6725 485-495 Negative_regulation denotes Inhibition
T6724 584-591 Protein denotes Fig. 2A
T6723 578-582 Protein denotes TNFα
T6722 499-502 Protein denotes Akt
T6721 254-264 Negative_regulation denotes Inhibition
T6720 431-445 Protein denotes IGF-1/zVAD.fmk
T6719 423-427 Protein denotes bFGF
T6718 273-276 Protein denotes Akt
T6717 268-271 Protein denotes Akt
T6716 232-242 Positive_regulation denotes activation
T6715 209-231 Protein denotes growth factor receptor
T6714 144-148 Protein denotes MAPK
R4508 T6715 T6716 themeOf growth factor receptor,activation
R4509 T6717 T6721 themeOf Akt,Inhibition
R4511 T6722 T6725 themeOf Akt,Inhibition
R4514 T6732 T6735 themeOf p38,inhibition
R4515 T6733 T6736 themeOf ERK,inhibition

test3

Id Subject Object Predicate Lexical cue
T5199 921-928 Positive_regulation denotes induced
T5198 916-920 Protein denotes TNFα
T5197 703-710 Positive_regulation denotes induced
T5196 698-702 Protein denotes TNFα
T5195 578-582 Protein denotes TNFα
T5194 485-495 Negative_regulation denotes Inhibition
T5193 431-436 Protein denotes IGF-1
T5192 423-427 Protein denotes bFGF
T5191 410-419 Positive_regulation denotes triggered
T5190 363-370 Positive_regulation denotes induced
T5189 277-286 Negative_regulation denotes inhibitor
T5188 254-264 Negative_regulation denotes Inhibition
T5157 916-920 Protein denotes TNFα
T5156 698-702 Protein denotes TNFα
T5155 578-582 Protein denotes TNFα
T5154 431-436 Protein denotes IGF-1
T5153 423-427 Protein denotes bFGF
R3538 T5188 T5190 themeOf Inhibition,induced
R3539 T5188 T5191 themeOf Inhibition,triggered
R3540 T5193 T5191 causeOf IGF-1,triggered