PMC:3585731 / 0-198
Annnotations
testone
{"project":"testone","denotations":[{"id":"T11","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T12","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T21","span":{"begin":4,"end":13},"obj":"Regulation"}],"text":"Akt Regulates TNFα Synthesis Downstream of RIP1 Kinase Activation during Necroptosis\nInterplay of Akt and JNK in Necroptosis Control\n\nAbstract\nNecroptosis is a regulated form of necrotic cell death "}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T153","span":{"begin":0,"end":3},"obj":"NN"},{"id":"T154","span":{"begin":4,"end":13},"obj":"VB"},{"id":"T155","span":{"begin":14,"end":18},"obj":"NNP"},{"id":"T156","span":{"begin":19,"end":28},"obj":"NNP"},{"id":"T157","span":{"begin":29,"end":39},"obj":"NNP"},{"id":"T158","span":{"begin":40,"end":42},"obj":"IN"},{"id":"T159","span":{"begin":43,"end":47},"obj":"NN"},{"id":"T160","span":{"begin":48,"end":54},"obj":"NN"},{"id":"T161","span":{"begin":55,"end":65},"obj":"NN"},{"id":"T162","span":{"begin":66,"end":72},"obj":"IN"},{"id":"T163","span":{"begin":73,"end":84},"obj":"NN"},{"id":"T172","span":{"begin":192,"end":197},"obj":"NN"},{"id":"T171","span":{"begin":187,"end":191},"obj":"NN"},{"id":"T170","span":{"begin":178,"end":186},"obj":"JJ"},{"id":"T169","span":{"begin":175,"end":177},"obj":"IN"},{"id":"T168","span":{"begin":170,"end":174},"obj":"NN"},{"id":"T167","span":{"begin":160,"end":169},"obj":"VB"},{"id":"T166","span":{"begin":158,"end":159},"obj":"DT"},{"id":"T165","span":{"begin":155,"end":157},"obj":"VB"},{"id":"T164","span":{"begin":143,"end":154},"obj":"NN"}],"relations":[{"id":"R15","pred":"arg1Of","subj":"T153","obj":"T154"},{"id":"R16","pred":"arg1Of","subj":"T154","obj":"T162"},{"id":"R17","pred":"arg2Of","subj":"T157","obj":"T154"},{"id":"R18","pred":"arg1Of","subj":"T157","obj":"T155"},{"id":"R19","pred":"arg1Of","subj":"T157","obj":"T156"},{"id":"R20","pred":"arg1Of","subj":"T157","obj":"T158"},{"id":"R21","pred":"arg2Of","subj":"T161","obj":"T158"},{"id":"R22","pred":"arg1Of","subj":"T161","obj":"T159"},{"id":"R23","pred":"arg1Of","subj":"T161","obj":"T160"},{"id":"R24","pred":"arg2Of","subj":"T163","obj":"T162"},{"id":"R25","pred":"arg1Of","subj":"T164","obj":"T165"},{"id":"R26","pred":"arg2Of","subj":"T168","obj":"T165"},{"id":"R27","pred":"arg1Of","subj":"T168","obj":"T166"},{"id":"R28","pred":"arg2Of","subj":"T168","obj":"T167"},{"id":"R29","pred":"arg1Of","subj":"T168","obj":"T169"},{"id":"R34","pred":"arg2Of","subj":"T172","obj":"T169"},{"id":"R35","pred":"arg1Of","subj":"T172","obj":"T170"},{"id":"R36","pred":"arg1Of","subj":"T172","obj":"T171"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Akt Regulates TNFα Synthesis Downstream of RIP1 Kinase Activation during Necroptosis\nInterplay of Akt and JNK in Necroptosis Control\n\nAbstract\nNecroptosis is a regulated form of necrotic cell death "}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T88","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T89","span":{"begin":43,"end":47},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Akt Regulates TNFα Synthesis Downstream of RIP1 Kinase Activation during Necroptosis\nInterplay of Akt and JNK in Necroptosis Control\n\nAbstract\nNecroptosis is a regulated form of necrotic cell death "}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T387","span":{"begin":0,"end":3},"obj":"http://www.uniprot.org/uniprot/P31751"},{"id":"T394","span":{"begin":0,"end":3},"obj":"http://www.uniprot.org/uniprot/Q9Y243"},{"id":"T401","span":{"begin":14,"end":18},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T405","span":{"begin":43,"end":47},"obj":"http://www.uniprot.org/uniprot/Q13546"},{"id":"T380","span":{"begin":0,"end":3},"obj":"http://www.uniprot.org/uniprot/P31749"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Akt Regulates TNFα Synthesis Downstream of RIP1 Kinase Activation during Necroptosis\nInterplay of Akt and JNK in Necroptosis Control\n\nAbstract\nNecroptosis is a regulated form of necrotic cell death "}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T98","span":{"begin":19,"end":28},"obj":"http://purl.obolibrary.org/obo/GO_0009058"},{"id":"T99","span":{"begin":73,"end":84},"obj":"http://purl.obolibrary.org/obo/GO_0070266"},{"id":"T107","span":{"begin":73,"end":84},"obj":"http://purl.obolibrary.org/obo/GO_0097528"},{"id":"T121","span":{"begin":192,"end":197},"obj":"http://purl.obolibrary.org/obo/GO_0016265"},{"id":"T118","span":{"begin":187,"end":197},"obj":"http://purl.obolibrary.org/obo/GO_0008219"},{"id":"T117","span":{"begin":178,"end":197},"obj":"http://purl.obolibrary.org/obo/GO_0097300"},{"id":"T116","span":{"begin":178,"end":197},"obj":"http://purl.obolibrary.org/obo/GO_0070265"},{"id":"T115","span":{"begin":178,"end":197},"obj":"http://purl.obolibrary.org/obo/GO_0010939"},{"id":"T108","span":{"begin":143,"end":154},"obj":"http://purl.obolibrary.org/obo/GO_0097528"},{"id":"T100","span":{"begin":143,"end":154},"obj":"http://purl.obolibrary.org/obo/GO_0070266"}],"text":"Akt Regulates TNFα Synthesis Downstream of RIP1 Kinase Activation during Necroptosis\nInterplay of Akt and JNK in Necroptosis Control\n\nAbstract\nNecroptosis is a regulated form of necrotic cell death "}
GO-CC
{"project":"GO-CC","denotations":[{"id":"T137","span":{"begin":187,"end":191},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"Akt Regulates TNFα Synthesis Downstream of RIP1 Kinase Activation during Necroptosis\nInterplay of Akt and JNK in Necroptosis Control\n\nAbstract\nNecroptosis is a regulated form of necrotic cell death "}
sentences
{"project":"sentences","denotations":[{"id":"T60","span":{"begin":0,"end":84},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":84},"obj":"Sentence"},{"id":"T2","span":{"begin":85,"end":132},"obj":"Sentence"},{"id":"T3","span":{"begin":134,"end":142},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Akt Regulates TNFα Synthesis Downstream of RIP1 Kinase Activation during Necroptosis\nInterplay of Akt and JNK in Necroptosis Control\n\nAbstract\nNecroptosis is a regulated form of necrotic cell death "}
simple1
{"project":"simple1","denotations":[{"id":"T143","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T144","span":{"begin":43,"end":47},"obj":"Protein"}],"text":"Akt Regulates TNFα Synthesis Downstream of RIP1 Kinase Activation during Necroptosis\nInterplay of Akt and JNK in Necroptosis Control\n\nAbstract\nNecroptosis is a regulated form of necrotic cell death "}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T353","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T354","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T363","span":{"begin":4,"end":13},"obj":"Regulation"},{"id":"T364","span":{"begin":19,"end":28},"obj":"Gene_expression"},{"id":"T365","span":{"begin":55,"end":65},"obj":"Positive_regulation"}],"relations":[{"id":"R450","pred":"themeOf","subj":"T353","obj":"T364"},{"id":"R451","pred":"themeOf","subj":"T354","obj":"T365"},{"id":"R455","pred":"themeOf","subj":"T364","obj":"T363"}],"text":"Akt Regulates TNFα Synthesis Downstream of RIP1 Kinase Activation during Necroptosis\nInterplay of Akt and JNK in Necroptosis Control\n\nAbstract\nNecroptosis is a regulated form of necrotic cell death "}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T441","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T442","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T451","span":{"begin":19,"end":28},"obj":"Gene_expression"},{"id":"T452","span":{"begin":4,"end":13},"obj":"Regulation"},{"id":"T453","span":{"begin":55,"end":65},"obj":"Positive_regulation"}],"relations":[{"id":"R469","pred":"themeOf","subj":"T441","obj":"T451"},{"id":"R470","pred":"themeOf","subj":"T442","obj":"T453"},{"id":"R473","pred":"themeOf","subj":"T451","obj":"T452"}],"text":"Akt Regulates TNFα Synthesis Downstream of RIP1 Kinase Activation during Necroptosis\nInterplay of Akt and JNK in Necroptosis Control\n\nAbstract\nNecroptosis is a regulated form of necrotic cell death "}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T410","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T411","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T420","span":{"begin":19,"end":28},"obj":"Gene_expression"},{"id":"T421","span":{"begin":55,"end":65},"obj":"Positive_regulation"},{"id":"T422","span":{"begin":4,"end":13},"obj":"Regulation"}],"relations":[{"id":"R457","pred":"themeOf","subj":"T410","obj":"T420"},{"id":"R458","pred":"themeOf","subj":"T411","obj":"T421"},{"id":"R462","pred":"themeOf","subj":"T420","obj":"T422"}],"text":"Akt Regulates TNFα Synthesis Downstream of RIP1 Kinase Activation during Necroptosis\nInterplay of Akt and JNK in Necroptosis Control\n\nAbstract\nNecroptosis is a regulated form of necrotic cell death "}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T728","span":{"begin":0,"end":3},"obj":"Protein"},{"id":"T741","span":{"begin":43,"end":54},"obj":"Protein"},{"id":"T744","span":{"begin":14,"end":17},"obj":"Protein"},{"id":"T753","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T765","span":{"begin":43,"end":84},"obj":"Positive_regulation"}],"relations":[{"id":"R435","pred":"themeOf","subj":"T741","obj":"T765"}],"text":"Akt Regulates TNFα Synthesis Downstream of RIP1 Kinase Activation during Necroptosis\nInterplay of Akt and JNK in Necroptosis Control\n\nAbstract\nNecroptosis is a regulated form of necrotic cell death "}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T487","span":{"begin":0,"end":3},"obj":"NNP"},{"id":"T488","span":{"begin":4,"end":13},"obj":"VBZ"},{"id":"T489","span":{"begin":14,"end":18},"obj":"NNP"},{"id":"T490","span":{"begin":19,"end":28},"obj":"NNP"},{"id":"T491","span":{"begin":29,"end":39},"obj":"NNP"},{"id":"T492","span":{"begin":40,"end":42},"obj":"IN"},{"id":"T493","span":{"begin":43,"end":47},"obj":"NNP"},{"id":"T494","span":{"begin":48,"end":54},"obj":"NNP"},{"id":"T495","span":{"begin":55,"end":65},"obj":"NNP"},{"id":"T496","span":{"begin":66,"end":72},"obj":"IN"},{"id":"T497","span":{"begin":73,"end":84},"obj":"NNP"},{"id":"T506","span":{"begin":192,"end":197},"obj":"NN"},{"id":"T505","span":{"begin":187,"end":191},"obj":"NN"},{"id":"T504","span":{"begin":178,"end":186},"obj":"JJ"},{"id":"T503","span":{"begin":175,"end":177},"obj":"IN"},{"id":"T502","span":{"begin":170,"end":174},"obj":"NN"},{"id":"T501","span":{"begin":160,"end":169},"obj":"JJ"},{"id":"T500","span":{"begin":158,"end":159},"obj":"DT"},{"id":"T499","span":{"begin":155,"end":157},"obj":"VBZ"},{"id":"T498","span":{"begin":143,"end":154},"obj":"NNP"}],"relations":[{"id":"R228","pred":"ROOT","subj":"T488","obj":"T488"},{"id":"R229","pred":"compound","subj":"T489","obj":"T491"},{"id":"R230","pred":"compound","subj":"T490","obj":"T491"},{"id":"R231","pred":"dobj","subj":"T491","obj":"T488"},{"id":"R232","pred":"prep","subj":"T492","obj":"T491"},{"id":"R233","pred":"compound","subj":"T493","obj":"T494"},{"id":"R234","pred":"compound","subj":"T494","obj":"T495"},{"id":"R235","pred":"pobj","subj":"T495","obj":"T492"},{"id":"R236","pred":"prep","subj":"T496","obj":"T488"},{"id":"R237","pred":"compound","subj":"T497","obj":"T498"},{"id":"R238","pred":"pobj","subj":"T498","obj":"T496"},{"id":"R239","pred":"conj","subj":"T499","obj":"T488"},{"id":"R240","pred":"det","subj":"T500","obj":"T502"},{"id":"R241","pred":"amod","subj":"T501","obj":"T502"},{"id":"R242","pred":"attr","subj":"T502","obj":"T499"},{"id":"R243","pred":"prep","subj":"T503","obj":"T502"},{"id":"R244","pred":"amod","subj":"T504","obj":"T506"},{"id":"R245","pred":"compound","subj":"T505","obj":"T506"},{"id":"R246","pred":"pobj","subj":"T506","obj":"T503"},{"id":"R227","pred":"nsubj","subj":"T487","obj":"T488"}],"text":"Akt Regulates TNFα Synthesis Downstream of RIP1 Kinase Activation during Necroptosis\nInterplay of Akt and JNK in Necroptosis Control\n\nAbstract\nNecroptosis is a regulated form of necrotic cell death "}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T456","span":{"begin":0,"end":3},"obj":"Protein"},{"id":"T457","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T458","span":{"begin":43,"end":54},"obj":"Protein"},{"id":"T459","span":{"begin":19,"end":28},"obj":"Gene_expression"},{"id":"T460","span":{"begin":55,"end":65},"obj":"Positive_regulation"},{"id":"T461","span":{"begin":4,"end":13},"obj":"Regulation"}],"relations":[{"id":"R212","pred":"causeOf","subj":"T456","obj":"T461"},{"id":"R213","pred":"themeOf","subj":"T457","obj":"T459"},{"id":"R214","pred":"themeOf","subj":"T458","obj":"T460"},{"id":"R215","pred":"themeOf","subj":"T459","obj":"T461"}],"text":"Akt Regulates TNFα Synthesis Downstream of RIP1 Kinase Activation during Necroptosis\nInterplay of Akt and JNK in Necroptosis Control\n\nAbstract\nNecroptosis is a regulated form of necrotic cell death "}
test3
{"project":"test3","denotations":[{"id":"T29","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T30","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T39","span":{"begin":4,"end":13},"obj":"Regulation"},{"id":"T40","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T41","span":{"begin":19,"end":28},"obj":"Gene_expression"},{"id":"T42","span":{"begin":43,"end":47},"obj":"Protein"}],"relations":[{"id":"R6","pred":"themeOf","subj":"T40","obj":"T41"},{"id":"R7","pred":"themeOf","subj":"T41","obj":"T39"}],"text":"Akt Regulates TNFα Synthesis Downstream of RIP1 Kinase Activation during Necroptosis\nInterplay of Akt and JNK in Necroptosis Control\n\nAbstract\nNecroptosis is a regulated form of necrotic cell death "}