PMC:3585731 / 0-179 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3585731","sourcedb":"PMC","sourceid":"3585731","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3585731","text":"Akt Regulates TNFα Synthesis Downstream of RIP1 Kinase Activation during Necroptosis\nInterplay of Akt and JNK in Necroptosis Control\n\nAbstract\nNecroptosis is a regulated form of n","divisions":[{"label":"article-title","span":{"begin":0,"end":84}},{"label":"alt-title","span":{"begin":85,"end":132}}],"tracks":[{"project":"testone","denotations":[{"id":"T11","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T12","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T21","span":{"begin":4,"end":13},"obj":"Regulation"}],"attributes":[{"subj":"T11","pred":"source","obj":"testone"},{"subj":"T12","pred":"source","obj":"testone"},{"subj":"T21","pred":"source","obj":"testone"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T153","span":{"begin":0,"end":3},"obj":"NN"},{"id":"T154","span":{"begin":4,"end":13},"obj":"VB"},{"id":"T155","span":{"begin":14,"end":18},"obj":"NNP"},{"id":"T156","span":{"begin":19,"end":28},"obj":"NNP"},{"id":"T157","span":{"begin":29,"end":39},"obj":"NNP"},{"id":"T158","span":{"begin":40,"end":42},"obj":"IN"},{"id":"T159","span":{"begin":43,"end":47},"obj":"NN"},{"id":"T160","span":{"begin":48,"end":54},"obj":"NN"},{"id":"T161","span":{"begin":55,"end":65},"obj":"NN"},{"id":"T162","span":{"begin":66,"end":72},"obj":"IN"},{"id":"T163","span":{"begin":73,"end":84},"obj":"NN"},{"id":"T169","span":{"begin":175,"end":177},"obj":"IN"},{"id":"T168","span":{"begin":170,"end":174},"obj":"NN"},{"id":"T167","span":{"begin":160,"end":169},"obj":"VB"},{"id":"T166","span":{"begin":158,"end":159},"obj":"DT"},{"id":"T165","span":{"begin":155,"end":157},"obj":"VB"},{"id":"T164","span":{"begin":143,"end":154},"obj":"NN"}],"relations":[{"id":"R15","pred":"arg1Of","subj":"T153","obj":"T154"},{"id":"R16","pred":"arg1Of","subj":"T154","obj":"T162"},{"id":"R17","pred":"arg2Of","subj":"T157","obj":"T154"},{"id":"R18","pred":"arg1Of","subj":"T157","obj":"T155"},{"id":"R19","pred":"arg1Of","subj":"T157","obj":"T156"},{"id":"R20","pred":"arg1Of","subj":"T157","obj":"T158"},{"id":"R21","pred":"arg2Of","subj":"T161","obj":"T158"},{"id":"R22","pred":"arg1Of","subj":"T161","obj":"T159"},{"id":"R23","pred":"arg1Of","subj":"T161","obj":"T160"},{"id":"R24","pred":"arg2Of","subj":"T163","obj":"T162"},{"id":"R25","pred":"arg1Of","subj":"T164","obj":"T165"},{"id":"R26","pred":"arg2Of","subj":"T168","obj":"T165"},{"id":"R27","pred":"arg1Of","subj":"T168","obj":"T166"},{"id":"R28","pred":"arg2Of","subj":"T168","obj":"T167"},{"id":"R29","pred":"arg1Of","subj":"T168","obj":"T169"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T153","pred":"source","obj":"pmc-enju-pas"},{"subj":"T154","pred":"source","obj":"pmc-enju-pas"},{"subj":"T155","pred":"source","obj":"pmc-enju-pas"},{"subj":"T156","pred":"source","obj":"pmc-enju-pas"},{"subj":"T157","pred":"source","obj":"pmc-enju-pas"},{"subj":"T158","pred":"source","obj":"pmc-enju-pas"},{"subj":"T159","pred":"source","obj":"pmc-enju-pas"},{"subj":"T160","pred":"source","obj":"pmc-enju-pas"},{"subj":"T161","pred":"source","obj":"pmc-enju-pas"},{"subj":"T162","pred":"source","obj":"pmc-enju-pas"},{"subj":"T163","pred":"source","obj":"pmc-enju-pas"},{"subj":"T169","pred":"source","obj":"pmc-enju-pas"},{"subj":"T168","pred":"source","obj":"pmc-enju-pas"},{"subj":"T167","pred":"source","obj":"pmc-enju-pas"},{"subj":"T166","pred":"source","obj":"pmc-enju-pas"},{"subj":"T165","pred":"source","obj":"pmc-enju-pas"},{"subj":"T164","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T88","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T89","span":{"begin":43,"end":47},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T88","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"},{"subj":"T89","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T387","span":{"begin":0,"end":3},"obj":"http://www.uniprot.org/uniprot/P31751"},{"id":"T394","span":{"begin":0,"end":3},"obj":"http://www.uniprot.org/uniprot/Q9Y243"},{"id":"T401","span":{"begin":14,"end":18},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T405","span":{"begin":43,"end":47},"obj":"http://www.uniprot.org/uniprot/Q13546"},{"id":"T380","span":{"begin":0,"end":3},"obj":"http://www.uniprot.org/uniprot/P31749"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T387","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T394","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T401","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T405","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T380","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"GO-BP","denotations":[{"id":"T98","span":{"begin":19,"end":28},"obj":"http://purl.obolibrary.org/obo/GO_0009058"},{"id":"T99","span":{"begin":73,"end":84},"obj":"http://purl.obolibrary.org/obo/GO_0070266"},{"id":"T107","span":{"begin":73,"end":84},"obj":"http://purl.obolibrary.org/obo/GO_0097528"},{"id":"T108","span":{"begin":143,"end":154},"obj":"http://purl.obolibrary.org/obo/GO_0097528"},{"id":"T100","span":{"begin":143,"end":154},"obj":"http://purl.obolibrary.org/obo/GO_0070266"}],"attributes":[{"subj":"T98","pred":"source","obj":"GO-BP"},{"subj":"T99","pred":"source","obj":"GO-BP"},{"subj":"T107","pred":"source","obj":"GO-BP"},{"subj":"T108","pred":"source","obj":"GO-BP"},{"subj":"T100","pred":"source","obj":"GO-BP"}]},{"project":"sentences","denotations":[{"id":"T60","span":{"begin":0,"end":84},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":84},"obj":"Sentence"},{"id":"T2","span":{"begin":85,"end":132},"obj":"Sentence"},{"id":"T3","span":{"begin":134,"end":142},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T60","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"}]},{"project":"simple1","denotations":[{"id":"T143","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T144","span":{"begin":43,"end":47},"obj":"Protein"}],"attributes":[{"subj":"T143","pred":"source","obj":"simple1"},{"subj":"T144","pred":"source","obj":"simple1"}]},{"project":"BioNLP16_DUT","denotations":[{"id":"T353","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T354","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T363","span":{"begin":4,"end":13},"obj":"Regulation"},{"id":"T364","span":{"begin":19,"end":28},"obj":"Gene_expression"},{"id":"T365","span":{"begin":55,"end":65},"obj":"Positive_regulation"}],"relations":[{"id":"R450","pred":"themeOf","subj":"T353","obj":"T364"},{"id":"R451","pred":"themeOf","subj":"T354","obj":"T365"},{"id":"R455","pred":"themeOf","subj":"T364","obj":"T363"}],"attributes":[{"subj":"T353","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T354","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T363","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T364","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T365","pred":"source","obj":"BioNLP16_DUT"}]},{"project":"BioNLP16_Messiy","denotations":[{"id":"T441","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T442","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T451","span":{"begin":19,"end":28},"obj":"Gene_expression"},{"id":"T452","span":{"begin":4,"end":13},"obj":"Regulation"},{"id":"T453","span":{"begin":55,"end":65},"obj":"Positive_regulation"}],"relations":[{"id":"R469","pred":"themeOf","subj":"T441","obj":"T451"},{"id":"R470","pred":"themeOf","subj":"T442","obj":"T453"},{"id":"R473","pred":"themeOf","subj":"T451","obj":"T452"}],"attributes":[{"subj":"T441","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T442","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T451","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T452","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T453","pred":"source","obj":"BioNLP16_Messiy"}]},{"project":"DLUT931","denotations":[{"id":"T410","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T411","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T420","span":{"begin":19,"end":28},"obj":"Gene_expression"},{"id":"T421","span":{"begin":55,"end":65},"obj":"Positive_regulation"},{"id":"T422","span":{"begin":4,"end":13},"obj":"Regulation"}],"relations":[{"id":"R457","pred":"themeOf","subj":"T410","obj":"T420"},{"id":"R458","pred":"themeOf","subj":"T411","obj":"T421"},{"id":"R462","pred":"themeOf","subj":"T420","obj":"T422"}],"attributes":[{"subj":"T410","pred":"source","obj":"DLUT931"},{"subj":"T411","pred":"source","obj":"DLUT931"},{"subj":"T420","pred":"source","obj":"DLUT931"},{"subj":"T421","pred":"source","obj":"DLUT931"},{"subj":"T422","pred":"source","obj":"DLUT931"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T728","span":{"begin":0,"end":3},"obj":"Protein"},{"id":"T741","span":{"begin":43,"end":54},"obj":"Protein"},{"id":"T744","span":{"begin":14,"end":17},"obj":"Protein"},{"id":"T753","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T765","span":{"begin":43,"end":84},"obj":"Positive_regulation"}],"relations":[{"id":"R435","pred":"themeOf","subj":"T741","obj":"T765"}],"attributes":[{"subj":"T728","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T741","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T744","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T753","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T765","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T487","span":{"begin":0,"end":3},"obj":"NNP"},{"id":"T488","span":{"begin":4,"end":13},"obj":"VBZ"},{"id":"T489","span":{"begin":14,"end":18},"obj":"NNP"},{"id":"T490","span":{"begin":19,"end":28},"obj":"NNP"},{"id":"T491","span":{"begin":29,"end":39},"obj":"NNP"},{"id":"T492","span":{"begin":40,"end":42},"obj":"IN"},{"id":"T493","span":{"begin":43,"end":47},"obj":"NNP"},{"id":"T494","span":{"begin":48,"end":54},"obj":"NNP"},{"id":"T495","span":{"begin":55,"end":65},"obj":"NNP"},{"id":"T496","span":{"begin":66,"end":72},"obj":"IN"},{"id":"T497","span":{"begin":73,"end":84},"obj":"NNP"},{"id":"T503","span":{"begin":175,"end":177},"obj":"IN"},{"id":"T502","span":{"begin":170,"end":174},"obj":"NN"},{"id":"T501","span":{"begin":160,"end":169},"obj":"JJ"},{"id":"T500","span":{"begin":158,"end":159},"obj":"DT"},{"id":"T499","span":{"begin":155,"end":157},"obj":"VBZ"},{"id":"T498","span":{"begin":143,"end":154},"obj":"NNP"}],"relations":[{"id":"R228","pred":"ROOT","subj":"T488","obj":"T488"},{"id":"R229","pred":"compound","subj":"T489","obj":"T491"},{"id":"R230","pred":"compound","subj":"T490","obj":"T491"},{"id":"R231","pred":"dobj","subj":"T491","obj":"T488"},{"id":"R232","pred":"prep","subj":"T492","obj":"T491"},{"id":"R233","pred":"compound","subj":"T493","obj":"T494"},{"id":"R234","pred":"compound","subj":"T494","obj":"T495"},{"id":"R235","pred":"pobj","subj":"T495","obj":"T492"},{"id":"R236","pred":"prep","subj":"T496","obj":"T488"},{"id":"R237","pred":"compound","subj":"T497","obj":"T498"},{"id":"R238","pred":"pobj","subj":"T498","obj":"T496"},{"id":"R239","pred":"conj","subj":"T499","obj":"T488"},{"id":"R240","pred":"det","subj":"T500","obj":"T502"},{"id":"R241","pred":"amod","subj":"T501","obj":"T502"},{"id":"R242","pred":"attr","subj":"T502","obj":"T499"},{"id":"R243","pred":"prep","subj":"T503","obj":"T502"},{"id":"R227","pred":"nsubj","subj":"T487","obj":"T488"}],"attributes":[{"subj":"T487","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T488","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T489","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T490","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T491","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T492","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T493","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T494","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T495","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T496","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T497","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T503","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T502","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T501","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T500","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T499","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T498","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T456","span":{"begin":0,"end":3},"obj":"Protein"},{"id":"T457","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T458","span":{"begin":43,"end":54},"obj":"Protein"},{"id":"T459","span":{"begin":19,"end":28},"obj":"Gene_expression"},{"id":"T460","span":{"begin":55,"end":65},"obj":"Positive_regulation"},{"id":"T461","span":{"begin":4,"end":13},"obj":"Regulation"}],"relations":[{"id":"R212","pred":"causeOf","subj":"T456","obj":"T461"},{"id":"R213","pred":"themeOf","subj":"T457","obj":"T459"},{"id":"R214","pred":"themeOf","subj":"T458","obj":"T460"},{"id":"R215","pred":"themeOf","subj":"T459","obj":"T461"}],"attributes":[{"subj":"T456","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T457","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T458","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T459","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T460","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T461","pred":"source","obj":"bionlp-st-ge-2016-test-tees"}]},{"project":"test3","denotations":[{"id":"T29","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T30","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T39","span":{"begin":4,"end":13},"obj":"Regulation"},{"id":"T40","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T41","span":{"begin":19,"end":28},"obj":"Gene_expression"},{"id":"T42","span":{"begin":43,"end":47},"obj":"Protein"}],"relations":[{"id":"R6","pred":"themeOf","subj":"T40","obj":"T41"},{"id":"R7","pred":"themeOf","subj":"T41","obj":"T39"}],"attributes":[{"subj":"T29","pred":"source","obj":"test3"},{"subj":"T30","pred":"source","obj":"test3"},{"subj":"T39","pred":"source","obj":"test3"},{"subj":"T40","pred":"source","obj":"test3"},{"subj":"T41","pred":"source","obj":"test3"},{"subj":"T42","pred":"source","obj":"test3"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"testone","color":"#9793ec","default":true},{"id":"pmc-enju-pas","color":"#a8ec93"},{"id":"bionlp-st-ge-2016-test-proteins","color":"#ec93c3"},{"id":"bionlp-st-ge-2016-uniprot","color":"#93ddec"},{"id":"GO-BP","color":"#ece193"},{"id":"sentences","color":"#c793ec"},{"id":"simple1","color":"#93ecad"},{"id":"BioNLP16_DUT","color":"#ec9393"},{"id":"BioNLP16_Messiy","color":"#93acec"},{"id":"DLUT931","color":"#c6ec93"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#ec93e0"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#93ecdd"},{"id":"bionlp-st-ge-2016-test-tees","color":"#ecc393"},{"id":"test3","color":"#a993ec"}]}]}}