PMC:3577827 / 28339-29423 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3577827","sourcedb":"PMC","sourceid":"3577827","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3577827","text":"C. orbiculare Inoculations\nC. orbiculare strain 104-T [41] was maintained on potato dextrose agar (Difco, MI, USA) at 24°C in the dark. Conidia were obtained by gently scraping 7 d cultures as described [42]. Mature leaves of 2.5 true leaf stage seedlings were used for virulence assays. Quantification of C. orbiculare was performed by spotting 5 µl of a conidial suspension (5×105 conidia ml−1 in distilled water) on the surface of detached cucumber leaves, and then five leaf-disks were cut using a cork borer (No. 3) at 6 dpi. Leave disks were frozen in liquid nitrogen and ground using an SH-48 grinding apparatus (Kurabo, Osaka, Japan). Preparation of total RNA and first-strand cDNA, qRT-PCR were performed according to a method described previously [34]. Nucleotide sequences of C. orbiculare actin (Cor-ACT) primers are listed in Table S1. QRT-PCR data for Cor-ACT and C. sativus EF1α (Cs-EF1α) expression from cucumber were collected as copy number obtained from a standard curve of cycle times. The abundance of Cor-ACT was normalized against Cs-EF1α in infected samples.\n\n","divisions":[{"label":"Title","span":{"begin":0,"end":27}}],"tracks":[{"project":"PGDBj_disease_curation1","denotations":[{"id":"T248","span":{"begin":443,"end":451},"obj":"3659"},{"id":"T249","span":{"begin":920,"end":928},"obj":"3659"},{"id":"T250","span":{"begin":695,"end":698},"obj":"http://purl.obolibrary.org/obo/ECO_0000008"},{"id":"T251","span":{"begin":853,"end":856},"obj":"http://purl.obolibrary.org/obo/ECO_0000008"}],"attributes":[{"subj":"T248","pred":"source","obj":"PGDBj_disease_curation1"},{"subj":"T249","pred":"source","obj":"PGDBj_disease_curation1"},{"subj":"T250","pred":"source","obj":"PGDBj_disease_curation1"},{"subj":"T251","pred":"source","obj":"PGDBj_disease_curation1"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"PGDBj_disease_curation1","color":"#ec93a0","default":true}]}]}}