PMC:3570799 / 14273-15355 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3570799","sourcedb":"PMC","sourceid":"3570799","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3570799","text":"Genome properties\nThe genome consists of a circular 4,765,023 bp chromosome a 67.9% G+C content (Table 3 and Figure 3). Of the 4,563 genes predicted, 4,511 were protein-coding genes, and 52 RNAs; 80 pseudogenes were also identified. The majority of the protein-coding genes (74.8%) were assigned a putative function while the remaining ones were annotated as hypothetical proteins. The distribution of genes into COGs functional categories is presented in Table 4. A total of 388 genes are predicted to encode proteins involved in signal transduction, including 284 one-component systems, 41 histidine kinases, 47 response regulators, seven chemotaxis proteins and two additional unclassified proteins.\nTable 3 Genome Statistics\nFigure 3 Graphical map of the chromosome. From outside to the center: Genes on forward strand (color by COG categories), Genes on reverse strand (color by COG categories), RNA genes (tRNAs green, rRNAs red, other RNAs black), GC content (black), GC skew (purple/olive).\nTable 4 Number of genes associated with the general COG functional categories\n\nI","divisions":[{"label":"Title","span":{"begin":0,"end":17}},{"label":"Table caption","span":{"begin":703,"end":731}},{"label":"Title","span":{"begin":712,"end":729}},{"label":"Figure caption","span":{"begin":730,"end":1002}},{"label":"Table caption","span":{"begin":1001,"end":1081}},{"label":"Title","span":{"begin":1010,"end":1079}}],"tracks":[]}