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PMC:3558958 / 1540-23281 JSONTXT

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MicrobeTaxon

Id Subject Object Predicate Lexical cue Speculation
T25 388-401 http://purl.bioontology.org/ontology/NCBITAXON/1129 denotes Synechococcus
T26 1674-1687 http://purl.bioontology.org/ontology/NCBITAXON/44249 denotes Paenibacillus
T27 2465-2478 http://purl.bioontology.org/ontology/NCBITAXON/44249 denotes Paenibacillus
T28 1422-1438 http://purl.bioontology.org/ontology/NCBITAXON/58172 denotes Paenibacillus sp
T29 2344-2360 http://purl.bioontology.org/ontology/NCBITAXON/58172 denotes Paenibacillus sp
T30 1374-1400 http://purl.bioontology.org/ontology/NCBITAXON/481743 denotes Paenibacillus sp. Y412MC10
T31 1563-1571 http://purl.bioontology.org/ontology/NCBITAXON/1386 denotes Bacillus
T32 301-318 http://purl.bioontology.org/ontology/NCBITAXON/271 denotes Thermus aquaticus
T33 1702-1724 http://purl.bioontology.org/ontology/NCBITAXON/1406 denotes Paenibacillus polymyxa
T34 617-643 481743 denotes bacterial isolate Y412MC10
T35 793-801 481743 denotes Y412MC10
T36 938-966 544556 denotes Geobacillus species Y412MC61
T37 985-993 550542 denotes Y412MC52
T38 1016-1056 634956 denotes Geobacillus thermoglucosidasius C56-YS93
T39 326-344 http://purl.bioontology.org/ontology/NCBITAXON/56956 denotes Thermus brockianus
T40 1079-1102 481743 denotes Geobacillus sp.Y412MC10
T41 1226-1237 129337 denotes Geobacillus
T42 1284-1292 481743 denotes Y412MC10
T43 1508-1525 58172 denotes Paenibacillus sp.
T44 1881-1884 9615 denotes dog
T45 1891-1908 58172 denotes Paenibacillus sp.
T46 2089-2098 71995 denotes P. vortex
T47 2194-2211 130049 denotes P. dendritiformis
T48 2319-2327 481743 denotes Y412MC10
T49 1746-1763 58172 denotes Paenibacillus sp.
T50 350-378 http://purl.bioontology.org/ontology/NCBITAXON/28049 denotes Acidothermus cellulollyticus
T51 832-847 1891658 denotes Geobacillus sp.
T52 968-982 544556 denotes GenBank 544556
T53 995-1009 550542 denotes GenBank 550542
T54 1058-1072 634956 denotes GenBank 634956
T55 2969-2982 http://purl.bioontology.org/ontology/NCBITAXON/44249 denotes Paenibacillus
T56 5209-5214 http://purl.bioontology.org/ontology/NCBITAXON/4932 denotes yeast
T57 5454-5459 http://purl.bioontology.org/ontology/NCBITAXON/4932 denotes yeast
T58 2692-2707 481743 denotes strain Y412MC10
T59 2882-2890 481743 denotes Y412MC10
T60 2946-2954 481743 denotes Y412MC10
T61 2917-2928 129337 denotes Geobacillus
T62 3041-3049 481743 denotes Y412MC10
T63 3292-3300 481743 denotes Y412MC10
T64 3433-3466 1401 denotes Paenibacillus lautus NRRL NRS-666
T66 5794-5802 481743 denotes Y412MC10
T67 3337-3357 http://purl.bioontology.org/ontology/NCBITAXON/1401 denotes Paenibacillus lautus
T68 3077-3107 1401 denotes Paenibacillus lautus DSM 3055T
T69 5354-5360 4081 denotes tomato
T70 8177-8202 http://purl.bioontology.org/ontology/NCBITAXON/481743 denotes Paenibacillus sp.Y412MC10
T71 8846-8854 481743 denotes Y412MC10
T72 9263-9292 481743 denotes Paenibacillus lautus Y412MC10
T74 12191-12204 44249 denotes Paenibacillus
T75 19914-19939 128574 denotes Paenibacillus brasilensis
T76 19950-19974 369399 denotes Paenibacillus zanthoxyli
T77 19981-20010 481743 denotes Paenibacillus lautus Y412MC10
T78 15484-15497 44249 denotes Paenibacillus
T79 19849-19862 44249 denotes Paenibacillus
T80 12270-12279 1401 denotes P. lautus
T81 17607-17616 1401 denotes P. lautus
T82 12321-12330 71995 denotes P. vortex
T83 12783-12792 71995 denotes P. vortex
T84 15615-15624 71995 denotes P. vortex
T85 15908-15917 71995 denotes P. vortex
T86 15997-16006 71995 denotes P. vortex
T87 13616-13629 44249 denotes Paenibacillus
T88 16812-16821 71995 denotes P. vortex
T89 20211-20220 71995 denotes P. vortex
T90 12464-12481 130049 denotes P. dendritiformis
T91 12797-12814 130049 denotes P. dendritiformis
T92 20183-20200 130049 denotes P. dendritiformis
T93 12552-12560 481743 denotes Y412MC10
T94 12691-12699 481743 denotes Y412MC10
T95 13421-13429 481743 denotes Y412MC10
T96 14329-14337 481743 denotes Y412MC10
T97 15296-15304 481743 denotes Y412MC10
T98 13646-13659 44249 denotes Paenibacillus
T99 15457-15465 481743 denotes Y412MC10
T100 15579-15587 481743 denotes Y412MC10
T101 15730-15738 481743 denotes Y412MC10
T102 15987-15995 481743 denotes Y412MC10
T103 16116-16124 481743 denotes Y412MC10
T104 16775-16783 481743 denotes Y412MC10
T105 17225-17233 481743 denotes Y412MC10
T106 17327-17335 481743 denotes Y412MC10
T107 17621-17629 481743 denotes Y412MC10
T108 17937-17945 481743 denotes Y412MC10
T109 17983-17991 481743 denotes Y412MC10
T110 19087-19095 481743 denotes Y412MC10
T111 19682-19690 481743 denotes Y412MC10
T112 20248-20256 481743 denotes Y412MC10
T113 20412-20420 481743 denotes Y412MC10
T114 13479-13496 58172 denotes Paenibacillus sp.
T115 13874-13897 324057 denotes Paenibacillus sp. JDR-2
T116 13899-13932 717606 denotes Paenibacillus curdlanolyticus YK9
T117 13934-13961 349520 denotes Paenibacillus polymyxa E681
T118 13963-13989 886882 denotes Paenibacillus polymyxa SC2
T119 13995-14029 1036673 denotes Paenibacillus mucilaginosus KNP414
T120 14068-14073 3193 denotes plant
T121 14081-14106 715225 denotes Paenibacillus vortex V453
T122 14108-14130 908341 denotes Paenibacillus sp. HGF5
T123 14365-14387 908341 denotes Paenibacillus sp. HGF5
T124 15797-15819 908341 denotes Paenibacillus sp. HGF5
T125 14132-14154 944559 denotes Paenibacillus sp. HGF7
T126 14179-14184 9606 denotes human
T127 14195-14236 741161 denotes Paenibacillus larvae subsp. larvae B-3650
T128 14238-14244 741161 denotes 741161
T129 14250-14259 7460 denotes honey bee
T130 14282-14285 7460 denotes bee
T131 14389-14409 908341 denotes NCBI Taxon ID 908341
T132 14411-14426 908341 denotes Gold ID Gi05716
T133 15629-15640 908341 denotes P. sp. HGF5
T134 15922-15933 908341 denotes P. sp. HGF5
T135 16011-16022 908341 denotes P. sp. HGF5
T136 15647-15652 9606 denotes human
T137 15854-15859 9606 denotes human
T138 16919-16924 9606 denotes human
T139 15683-15694 1406 denotes P. polymyxa
T140 17254-17265 1406 denotes P. polymyxa
T141 15772-15792 71995 denotes Paenibacillus vortex
T142 15869-15880 944559 denotes P. sp. HGF7
T143 15962-15966 944559 denotes HGF7
T144 16053-16062 40674 denotes mammalian
T145 16803-16807 908341 denotes HGF5
T146 17270-17286 61624 denotes P. mucilaginosus
T147 17708-17723 1401 denotes Bacillus lautus
T148 17772-17780 9606 denotes children
T149 17886-17906 1401 denotes Paenibacillus lautus
T150 18504-18514 2759 denotes eukaryotic
T151 18913-18921 2 denotes bacteria
T152 19340-19349 481743 denotes Y4112MC10
T153 20474-20482 2 denotes bacteria
T154 20517-20543 http://purl.bioontology.org/ontology/NCBITAXON/481743 denotes Paenibacillus sp. Y412MC10
T155 20889-20894 9901 denotes bison
T156 21014-21019 9901 denotes bison
T157 20568-20584 http://purl.bioontology.org/ontology/NCBITAXON/58172 denotes Paenibacillus sp
T158 20813-20821 481743 denotes Y412MC10
T159 21138-21146 481743 denotes Y412MC10
T160 21261-21273 44249 denotes Paenibacilli
T161 3609-3619 http://purl.bioontology.org/ontology/NCBITAXON/1385 denotes Bacillales
T162 3540-3576 481743 denotes Paenibacillus lautus strain Y412MC10
T163 3687-3709 481743 denotes Paenibacillus Y412MC10
T164 3712-3742 1401 denotes Paenibacillus lautus DSM 3035T
T165 3755-3793 59843 denotes Paenibacillus glucanolyticus DSM 5162T
T166 3806-3844 59845 denotes Paenibacillus illinoisensis DSM 11733T
T167 3857-3891 59846 denotes Paenibacillus chibensis DSM 11731T
T168 3904-3942 170367 denotes Paenibacillus ginsengisoli LMG 23406 T
T169 3955-4010 467974 denotes Paenibacillus macquariensis subsp defensor NCIB 14397 T
T170 4023-4061 172713 denotes Paenibacillus kribbensis KCTC 0766BP T
T171 4074-4113 135193 denotes Paenibacillus daejeonensis KCCM 41557 T
T172 4126-4160 160799 denotes Paenibacillus borealis DSM 13188 T
T173 4173-4207 189426 denotes Paenibacillus odorifer DSM 15391 T
T174 4220-4252 157839 denotes Paenibacillus cookie LMG 18419 T
T175 4265-4298 114136 denotes Paenibacillus jamilae DSM 13815 T
T176 4311-4348 116718 denotes Paenibacillus azoreducens DSM 13822 T
T177 4361-4396 169760 denotes Paenibacillus stellifer DSM 14472 T
T178 4409-4441 59893 denotes Paenibacillus peoriae DSM 8320 T
T179 4454-4487 237530 denotes Paenibacillus cineris LMG 18349 T
T180 4500-4537 253703 denotes Paenibacillus antarcticus LMG 22078 T
T181 4550-4586 221028 denotes Paenibacillus favisporus LMG 20987 T
T182 4599-4631 228574 denotes Paenibacillus lactis DSM 15596 T
T183 4644-4682 441151 denotes Paenibacillus provencensis CIP 109358T
T184 4695-4731 479474 denotes Paenibacillus konsidanse KCTC 13165T
T185 6959-6988 481743 denotes Paenibacillus strain Y412MC10
T186 7491-7520 481743 denotes Paenibacillus strain Y412MC10 true
T187 7653-7682 481743 denotes Paenibacillus strain Y412MC10
T188 6527-6556 481743 denotes Paenibacillus strain Y412MC10
T189 12841-12867 http://purl.bioontology.org/ontology/NCBITAXON/481743 denotes Paenibacillus sp. Y412MC10
T190 12983-13009 http://purl.bioontology.org/ontology/NCBITAXON/481743 denotes Paenibacillus sp. Y412MC10
T191 13185-13211 http://purl.bioontology.org/ontology/NCBITAXON/481743 denotes Paenibacillus sp. Y412MC10
T192 14644-14670 http://purl.bioontology.org/ontology/NCBITAXON/481743 denotes Paenibacillus sp. Y412MC10
T193 14861-14887 http://purl.bioontology.org/ontology/NCBITAXON/481743 denotes Paenibacillus sp. Y412MC10
T194 14703-14713 http://purl.bioontology.org/ontology/NCBITAXON/1385 denotes Bacillales
T195 14784-14807 http://purl.bioontology.org/ontology/NCBITAXON/324057 denotes Paenibacillus sp. JDR-2
T196 14817-14851 717606 denotes Paenibacillus curdlanolyticus YK9,
T197 14897-14922 715225 denotes Paenibacillus vortex V453
T198 14932-14959 349520 denotes Paenibacillus polymyxa E681
T199 14969-14995 886882 denotes Paenibacillus polymyxa SC2
T200 15005-15039 1036673 denotes Paenibacillus mucilaginosus KNP414
T201 15050-15072 908341 denotes Paenibacillus sp. HGF5
T202 15082-15104 944559 denotes Paenibacillus sp. HGF7
T203 15114-15155 741161 denotes Paenibacillus larvae subsp. larvae B-3650
T204 15165-15195 224308 denotes Bacillus subtilis subtilis 168
T205 14809-14815 324057 denotes 324057
T206 14889-14895 481743 denotes 481743
T207 14961-14967 349520 denotes 349520
T208 14997-15003 886882 denotes 886882
T209 15041-15048 1036673 denotes 1036673
T210 15074-15080 908341 denotes 908341
T211 15106-15112 944559 denotes 944559
T212 15157-15163 741161 denotes 741161
T213 15197-15204 224308 denotes 2243082
T214 14924-14930 715225 denotes 715225
T215 14852-14859 717606 denotes A717606
T216 16968-16976 481743 denotes Y412MC10
T217 16981-16985 908341 denotes HGF5
T218 17012-17016 908341 denotes HGF5
T219 17087-17095 481743 denotes Y412MC10
T220 17100-17109 71995 denotes P. vortex
T221 17136-17145 71995 denotes P. vortex
T222 17420-17428 481743 denotes Y412MC10
T223 17433-17444 1406 denotes P. polymyxa
T224 17505-17513 481743 denotes Y412MC10
T225 17518-17533 61624 denotes P mucilaginosus
T73 10917-10946 481743 denotes Paenibacillus lautus Y412MC10

2_test

Id Subject Object Predicate Lexical cue
23408395-9258667-140428044 229-230 9258667 denotes 1
23408395-5781580-140428045 320-321 5781580 denotes 2
23408395-5473907-140428046 322-323 5473907 denotes 3
23408395-8590676-140428047 346-347 8590676 denotes 4
23408395-11536814-140428048 411-412 11536814 denotes 6
23408395-8085788-140428049 1601-1602 8085788 denotes 7
23408395-20190026-140428050 1833-1834 20190026 denotes 8
23408395-15388704-140428051 1852-1853 15388704 denotes 9
23408395-21864605-140428052 1987-1989 21864605 denotes 11
23408395-22203557-140428052 1987-1989 22203557 denotes 11
23408395-21452603-140428052 1987-1989 21452603 denotes 11
23408395-21049291-140428053 2025-2027 21049291 denotes 14
23408395-21972145-140428053 2025-2027 21972145 denotes 14
23408395-21876378-140428053 2025-2027 21876378 denotes 14
23408395-21952539-140428054 2068-2070 21952539 denotes 17
23408395-18298829-140428055 2169-2171 18298829 denotes 19
23408395-21167037-140428056 2172-2174 21167037 denotes 20
23408395-18298829-140428057 2271-2273 18298829 denotes 19
23408395-10028268-140428058 2274-2276 10028268 denotes 21
23408395-21628502-140428059 2277-2279 21628502 denotes 22
23408395-22140171-140428060 3196-3198 22140171 denotes 24
23408395-10802651-140428067 6929-6931 10802651 denotes 41
23408395-19914934-140428068 8436-8438 19914934 denotes 42
23408395-16056220-140428069 9483-9485 16056220 denotes 45
23408395-18464787-140428070 10236-10238 18464787 denotes 47
23408395-20211023-140423122 10298-10300 20211023 denotes 48
23408395-9023104-140428071 10448-10450 9023104 denotes 49
23408395-9023104-140428072 10824-10826 9023104 denotes 49
23408395-17452365-140428073 10838-10840 17452365 denotes 50
23408395-12520045-140428074 10849-10851 12520045 denotes 51
23408395-11152613-140428075 10861-10863 11152613 denotes 52
23408395-11152613-140428076 10879-10881 11152613 denotes 52
23408395-18298829-140428077 12401-12403 18298829 denotes 19
23408395-21167037-140428078 12404-12406 21167037 denotes 20
23408395-18298829-140428079 12541-12543 18298829 denotes 19
23408395-10028268-140428080 12544-12546 10028268 denotes 21
23408395-21628502-140428081 12547-12549 21628502 denotes 22
23408395-16558822-140428082 17782-17784 16558822 denotes 58
23408395-12508882-140428083 19941-19943 12508882 denotes 60
23408395-17392223-140428084 19976-19978 17392223 denotes 61
23408395-20308591-140428085 20202-20204 20308591 denotes 62
23408395-18298829-140428086 20222-20224 18298829 denotes 19