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PMC:340383 / 8373-9105 JSONTXT

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Id Subject Object Predicate Lexical cue
T6106 491-492 -LRB- denotes (
T6105 502-504 VBZ denotes is
T6104 486-490 NN denotes CaeE
T6103 485-559 sentence denotes CaeE (AAK77203) is a hypothetical protein from the Caenohabditis elegans.
T6102 484-485 . denotes .
T6101 483-484 -RRB- denotes )
T6100 475-483 NN denotes EAA01004
T6099 474-475 -LRB- denotes (
T6098 461-468 NNP denotes gambiae
T6097 451-460 NNP denotes anopheles
T6096 469-473 NN denotes str.
T6095 447-450 DT denotes the
T6094 442-446 IN denotes from
T6093 434-441 NN denotes protein
T6092 432-433 DT denotes a
T6091 421-431 VBZ denotes represents
T6090 416-420 NN denotes AnoG
T6089 415-485 sentence denotes AnoG represents a protein from the anopheles gambiae str. (EAA01004).
T6088 414-415 . denotes .
T6087 413-414 -RRB- denotes )
T6086 399-405 NNP denotes Genome
T6085 388-398 NNP denotes Drosophila
T6084 406-413 NNP denotes Project
T6083 379-387 NNP denotes Berkeley
T6082 378-379 -LRB- denotes (
T6081 373-377 NN denotes BDGP
T6080 370-372 IN denotes in
T6079 362-369 NN denotes CG40084
T6078 354-358 NN denotes gene
T6077 349-353 DT denotes this
T6076 345-348 IN denotes for
T6075 359-361 VBZ denotes is
T6074 328-337 NN denotes accession
T6073 338-344 NN denotes number
T6072 324-327 DT denotes The
T6071 323-415 sentence denotes The accession number for this gene is CG40084 in BDGP (Berkeley Drosophila Genome Project).
T6070 322-323 . denotes .
T6069 310-322 NNP denotes melanogaster
T6068 307-309 NNP denotes D.
T6067 302-306 IN denotes from
T6066 289-293 NN denotes gene
T6065 294-301 NN denotes product
T6064 287-288 DT denotes a
T6063 284-286 VBZ denotes is
T6062 279-283 NN denotes DroM
T6061 278-323 sentence denotes DroM is a gene product from D. melanogaster.
T6060 277-278 . denotes .
T6059 271-277 NNP denotes crassa
T6058 260-270 NNP denotes Neurospora
T6057 255-259 IN denotes from
T6056 234-246 JJ denotes hypothetical
T6055 247-254 NN denotes protein
T6054 232-233 DT denotes a
T6053 227-228 -RRB- denotes )
T6052 219-227 NN denotes EAA31204
T6051 218-219 -LRB- denotes (
T6050 229-231 VBZ denotes is
T6049 213-217 NN denotes NeuC
T6048 212-278 sentence denotes NeuC (EAA31204) is a hypothetical protein from Neurospora crassa.
T6047 211-212 . denotes .
T6046 210-211 -RRB- denotes )
T6045 202-210 NN denotes AAF33142
T6044 201-202 -LRB- denotes (
T6043 192-200 NNP denotes glabrata
T6042 184-191 NNP denotes Candida
T6041 179-183 IN denotes from
T6040 171-178 NN denotes protein
T6039 169-170 DT denotes a
T6038 166-168 VBZ denotes is
T6037 161-165 NN denotes CanG
T6036 160-212 sentence denotes CanG is a protein from Candida glabrata (AAF33142).
T6035 159-160 . denotes .
T6034 158-159 -RRB- denotes )
T6033 149-158 NN denotes NP_014581
T6032 148-149 -LRB- denotes (
T6031 137-147 NNP denotes cerevisiae
T6030 123-136 NNP denotes Saccharomyces
T6029 118-122 IN denotes from
T6028 110-117 NN denotes protein
T6027 108-109 DT denotes a
T6026 105-107 VBZ denotes is
T6025 99-104 NN denotes Amip3
T6024 98-160 sentence denotes Amip3 is a protein from Saccharomyces cerevisiae (NP_014581).
T6023 97-98 . denotes .
T6022 90-97 NNS denotes species
T6021 82-89 JJ denotes various
T6020 79-81 IN denotes in
T6019 72-78 NN denotes domain
T6018 68-71 NN denotes ACD
T6017 65-67 IN denotes of
T6016 52-64 NN denotes conservation
T6015 48-51 DT denotes the
T6014 40-47 VBG denotes showing
T6013 21-29 NN denotes sequence
T6012 30-39 NN denotes alignment
T6011 16-20 NN denotes acid
T6010 10-15 NN denotes Amino
T6145 731-732 . denotes .
T6144 730-731 -RRB- denotes )
T6143 719-730 NN denotes ZP_00038107
T6142 718-719 -LRB- denotes (
T6141 701-711 NNP denotes fastidiosa
T6140 693-700 NNP denotes Xylella
T6139 712-717 NNP denotes Dixon
T6138 689-692 DT denotes the
T6137 684-688 IN denotes from
T6136 663-675 JJ denotes hypothetical
T6135 676-683 NN denotes protein
T6134 661-662 DT denotes a
T6133 658-660 VBZ denotes is
T6132 653-657 NN denotes XyFD
T6131 652-732 sentence denotes XyFD is a hypothetical protein from the Xylella fastidiosa Dixon (ZP_00038107).
T6130 651-652 . denotes .
T6129 630-640 NNP denotes Shewanella
T6128 641-651 NNP denotes oneidensis
T6127 626-629 DT denotes the
T6126 621-625 IN denotes from
T6125 606-612 NN denotes efflux
T6124 613-620 NN denotes protein
T6123 599-605 NN denotes cobalt
T6122 595-598 CC denotes and
T6121 585-594 NN denotes magnesium
T6120 576-584 NNS denotes bacteria
T6119 565-575 VBZ denotes represents
T6118 560-564 NN denotes CorC
T6117 559-652 sentence denotes CorC represents bacteria magnesium and cobalt efflux protein from the Shewanella oneidensis.
T6116 558-559 . denotes .
T6115 537-550 NNP denotes Caenohabditis
T6114 551-558 NNP denotes elegans
T6113 533-536 DT denotes the
T6112 528-532 IN denotes from
T6111 507-519 JJ denotes hypothetical
T6110 520-527 NN denotes protein
T6109 505-506 DT denotes a
T6108 500-501 -RRB- denotes )
T6107 492-500 NN denotes AAK77203
R3664 T6010 T6011 compound Amino,acid
R3665 T6011 T6012 compound acid,alignment
R3666 T6013 T6012 compound sequence,alignment
R3667 T6014 T6012 acl showing,alignment
R3668 T6015 T6016 det the,conservation
R3669 T6016 T6014 dobj conservation,showing
R3670 T6017 T6016 prep of,conservation
R3671 T6018 T6019 compound ACD,domain
R3672 T6019 T6017 pobj domain,of
R3673 T6020 T6014 prep in,showing
R3674 T6021 T6022 amod various,species
R3675 T6022 T6020 pobj species,in
R3676 T6023 T6012 punct .,alignment
R3677 T6025 T6026 nsubj Amip3,is
R3678 T6027 T6028 det a,protein
R3679 T6028 T6026 attr protein,is
R3680 T6029 T6028 prep from,protein
R3681 T6030 T6031 compound Saccharomyces,cerevisiae
R3682 T6031 T6029 pobj cerevisiae,from
R3683 T6032 T6028 punct (,protein
R3684 T6033 T6028 appos NP_014581,protein
R3685 T6034 T6026 punct ),is
R3686 T6035 T6026 punct .,is
R3687 T6037 T6038 nsubj CanG,is
R3688 T6039 T6040 det a,protein
R3689 T6040 T6038 attr protein,is
R3690 T6041 T6040 prep from,protein
R3691 T6042 T6043 compound Candida,glabrata
R3692 T6043 T6041 pobj glabrata,from
R3693 T6044 T6040 punct (,protein
R3694 T6045 T6040 appos AAF33142,protein
R3695 T6046 T6038 punct ),is
R3696 T6047 T6038 punct .,is
R3697 T6049 T6050 nsubj NeuC,is
R3698 T6051 T6049 punct (,NeuC
R3699 T6052 T6049 appos EAA31204,NeuC
R3700 T6053 T6050 punct ),is
R3701 T6054 T6055 det a,protein
R3702 T6055 T6050 attr protein,is
R3703 T6056 T6055 amod hypothetical,protein
R3704 T6057 T6055 prep from,protein
R3705 T6058 T6059 compound Neurospora,crassa
R3706 T6059 T6057 pobj crassa,from
R3707 T6060 T6050 punct .,is
R3708 T6062 T6063 nsubj DroM,is
R3709 T6064 T6065 det a,product
R3710 T6065 T6063 attr product,is
R3711 T6066 T6065 compound gene,product
R3712 T6067 T6065 prep from,product
R3713 T6068 T6069 compound D.,melanogaster
R3714 T6069 T6067 pobj melanogaster,from
R3715 T6070 T6063 punct .,is
R3716 T6072 T6073 det The,number
R3717 T6073 T6075 nsubj number,is
R3718 T6074 T6073 compound accession,number
R3719 T6076 T6073 prep for,number
R3720 T6077 T6078 det this,gene
R3721 T6078 T6076 pobj gene,for
R3722 T6079 T6075 attr CG40084,is
R3723 T6080 T6075 prep in,is
R3724 T6081 T6080 pobj BDGP,in
R3725 T6082 T6081 punct (,BDGP
R3726 T6083 T6084 compound Berkeley,Project
R3727 T6084 T6081 appos Project,BDGP
R3728 T6085 T6084 compound Drosophila,Project
R3729 T6086 T6084 compound Genome,Project
R3730 T6087 T6075 punct ),is
R3731 T6088 T6075 punct .,is
R3732 T6090 T6091 nsubj AnoG,represents
R3733 T6092 T6093 det a,protein
R3734 T6093 T6091 dobj protein,represents
R3735 T6094 T6093 prep from,protein
R3736 T6095 T6096 det the,str.
R3737 T6096 T6094 pobj str.,from
R3738 T6097 T6096 compound anopheles,str.
R3739 T6098 T6096 compound gambiae,str.
R3740 T6099 T6100 punct (,EAA01004
R3741 T6100 T6094 parataxis EAA01004,from
R3742 T6101 T6100 punct ),EAA01004
R3743 T6102 T6091 punct .,represents
R3744 T6104 T6105 nsubj CaeE,is
R3745 T6106 T6104 punct (,CaeE
R3746 T6107 T6104 appos AAK77203,CaeE
R3747 T6108 T6105 punct ),is
R3748 T6109 T6110 det a,protein
R3749 T6110 T6105 attr protein,is
R3750 T6111 T6110 amod hypothetical,protein
R3751 T6112 T6110 prep from,protein
R3752 T6113 T6114 det the,elegans
R3753 T6114 T6112 pobj elegans,from
R3754 T6115 T6114 compound Caenohabditis,elegans
R3755 T6116 T6105 punct .,is
R3756 T6118 T6119 nsubj CorC,represents
R3757 T6120 T6121 compound bacteria,magnesium
R3758 T6121 T6119 dobj magnesium,represents
R3759 T6122 T6121 cc and,magnesium
R3760 T6123 T6124 compound cobalt,protein
R3761 T6124 T6121 conj protein,magnesium
R3762 T6125 T6124 compound efflux,protein
R3763 T6126 T6121 prep from,magnesium
R3764 T6127 T6128 det the,oneidensis
R3765 T6128 T6126 pobj oneidensis,from
R3766 T6129 T6128 compound Shewanella,oneidensis
R3767 T6130 T6119 punct .,represents
R3768 T6132 T6133 nsubj XyFD,is
R3769 T6134 T6135 det a,protein
R3770 T6135 T6133 attr protein,is
R3771 T6136 T6135 amod hypothetical,protein
R3772 T6137 T6135 prep from,protein
R3773 T6138 T6139 det the,Dixon
R3774 T6139 T6137 pobj Dixon,from
R3775 T6140 T6139 compound Xylella,Dixon
R3776 T6141 T6139 compound fastidiosa,Dixon
R3777 T6142 T6135 punct (,protein
R3778 T6143 T6135 appos ZP_00038107,protein
R3779 T6144 T6133 punct ),is
R3780 T6145 T6133 punct .,is

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T5981 693-717 NCBITaxon:155919 denotes Xylella fastidiosa Dixon
T5980 630-651 NCBITaxon:70863 denotes Shewanella oneidensis
T5979 576-584 NCBITaxon:2 denotes bacteria
T5978 560-564 PR:000022321 denotes CorC
T5977 537-558 NCBITaxon:6239 denotes Caenohabditis elegans
T5976 451-468 NCBITaxon:7165 denotes anopheles gambiae
T5975 399-405 SO:0001026 denotes Genome
T5974 388-398 NCBITaxon:7215 denotes Drosophila
T5973 354-358 SO:0000704 denotes gene
T5972 307-322 NCBITaxon:7227 denotes D. melanogaster
T5971 289-293 SO:0000704 denotes gene
T5970 260-277 NCBITaxon:5141 denotes Neurospora crassa
T5969 184-200 NCBITaxon:5478 denotes Candida glabrata
T5968 123-147 NCBITaxon:4932 denotes Saccharomyces cerevisiae
T5967 90-97 NCBITaxon:species denotes species
T5966 72-78 SO:0000417 denotes domain

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6009 693-717 NCBITaxon:155919 denotes Xylella fastidiosa Dixon
T6008 676-683 CHEBI_PR_EXT:protein denotes protein
T6007 630-651 NCBITaxon:70863 denotes Shewanella oneidensis
T6006 613-620 CHEBI_PR_EXT:protein denotes protein
T6005 599-605 CHEBI_EXT:cobalt denotes cobalt
T6004 585-594 CHEBI_EXT:magnesium denotes magnesium
T6003 576-584 NCBITaxon:2 denotes bacteria
T6002 560-564 PR_EXT:000022321 denotes CorC
T6001 537-558 NCBITaxon:6239 denotes Caenohabditis elegans
T6000 520-527 CHEBI_PR_EXT:protein denotes protein
T5999 451-468 NCBITaxon:7165 denotes anopheles gambiae
T5998 434-441 CHEBI_PR_EXT:protein denotes protein
T5997 399-405 SO_EXT:0001026 denotes Genome
T5996 388-398 NCBITaxon:7215 denotes Drosophila
T5995 354-358 SO_EXT:0000704 denotes gene
T5994 307-322 NCBITaxon:7227 denotes D. melanogaster
T5993 289-301 SO_EXT:gene_product denotes gene product
T5992 260-277 NCBITaxon:5141 denotes Neurospora crassa
T5991 247-254 CHEBI_PR_EXT:protein denotes protein
T5990 184-200 NCBITaxon:5478 denotes Candida glabrata
T5989 171-178 CHEBI_PR_EXT:protein denotes protein
T5988 123-147 NCBITaxon:4932 denotes Saccharomyces cerevisiae
T5987 110-117 CHEBI_PR_EXT:protein denotes protein
T5986 90-97 NCBITaxon:species denotes species
T5985 72-78 SO_EXT:0000417 denotes domain
T5984 52-64 SO_EXT:biological_conservation_process_or_quality denotes conservation
T5983 21-29 SO_EXT:biological_sequence denotes sequence
T5982 10-20 CHEBI_SO_EXT:amino_acid denotes Amino acid