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PMC:340383 / 370-1311 JSONTXT

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Id Subject Object Predicate Lexical cue
T284 0-3 DT denotes The
T285 14-19 NNS denotes genes
T286 4-8 CD denotes four
T287 9-13 NN denotes Acdp
T288 52-59 VBP denotes contain
T289 20-21 -LRB- denotes (
T290 21-26 NN denotes Acdp1
T291 26-28 , denotes ,
T292 28-33 NN denotes Acdp2
T293 33-35 , denotes ,
T294 35-40 NN denotes Acdp3
T295 41-44 CC denotes and
T296 45-50 NN denotes Acdp4
T297 50-51 -RRB- denotes )
T298 60-65 CD denotes 3,631
T299 66-68 NNS denotes bp
T300 68-70 , denotes ,
T301 70-75 CD denotes 3,244
T302 76-78 NNS denotes bp
T303 78-80 , denotes ,
T304 80-85 CD denotes 2,684
T305 86-88 NNS denotes bp
T306 89-92 CC denotes and
T307 93-98 CD denotes 2,743
T308 99-101 NNS denotes bp
T309 102-104 IN denotes of
T310 105-109 NN denotes cDNA
T311 110-119 NNS denotes sequences
T312 119-121 , denotes ,
T313 121-124 CC denotes and
T314 125-131 VBP denotes encode
T315 132-139 VBN denotes deduced
T316 140-148 NN denotes proteins
T317 149-151 IN denotes of
T318 152-155 CD denotes 951
T319 180-185 NNS denotes acids
T320 155-157 , denotes ,
T321 157-160 CD denotes 874
T322 160-162 , denotes ,
T323 162-165 CD denotes 713
T324 166-169 CC denotes and
T325 170-173 CD denotes 771
T326 174-179 NN denotes amino
T327 185-187 , denotes ,
T328 187-199 RB denotes respectively
T329 199-200 . denotes .
T330 200-331 sentence denotes The mouse Acdp genes showed very strong homologies (>90%) in both nucleotide and amino acid sequences to their human counterparts.
T331 201-204 DT denotes The
T332 216-221 NNS denotes genes
T333 205-210 NN denotes mouse
T334 211-215 NN denotes Acdp
T335 222-228 VBD denotes showed
T336 229-233 RB denotes very
T337 234-240 JJ denotes strong
T338 241-251 NNS denotes homologies
T339 252-253 -LRB- denotes (
T340 256-257 NN denotes %
T341 253-254 SYM denotes >
T342 254-256 CD denotes 90
T343 257-258 -RRB- denotes )
T344 259-261 IN denotes in
T345 262-266 CC denotes both
T346 267-277 NN denotes nucleotide
T347 293-302 NNS denotes sequences
T348 278-281 CC denotes and
T349 282-287 NN denotes amino
T350 288-292 NN denotes acid
T351 303-305 IN denotes to
T352 306-311 PRP$ denotes their
T353 318-330 NNS denotes counterparts
T354 312-317 JJ denotes human
T355 330-331 . denotes .
T356 331-485 sentence denotes In addition, both nucleotide and amino acid sequences within the Ancient Conserved Domain (ACD) are highly conserved in many different taxonomic species.
T357 332-334 IN denotes In
T358 439-448 VBN denotes conserved
T359 335-343 NN denotes addition
T360 343-345 , denotes ,
T361 345-349 CC denotes both
T362 350-360 NN denotes nucleotide
T363 376-385 NNS denotes sequences
T364 361-364 CC denotes and
T365 365-370 NN denotes amino
T366 371-375 NN denotes acid
T367 386-392 IN denotes within
T368 393-396 DT denotes the
T369 415-421 NN denotes Domain
T370 397-404 JJ denotes Ancient
T371 405-414 VBN denotes Conserved
T372 422-423 -LRB- denotes (
T373 423-426 NN denotes ACD
T374 426-427 -RRB- denotes )
T375 428-431 VBP denotes are
T376 432-438 RB denotes highly
T377 449-451 IN denotes in
T378 452-456 JJ denotes many
T379 477-484 NNS denotes species
T380 457-466 JJ denotes different
T381 467-476 JJ denotes taxonomic
T382 484-485 . denotes .
T383 485-662 sentence denotes Particularly, Acdp proteins showed very strong AA homologies to the bacteria CorC protein (35% AA identity with 55% homology), which is involved in magnesium and cobalt efflux.
T384 486-498 RB denotes Particularly
T385 514-520 VBD denotes showed
T386 498-500 , denotes ,
T387 500-504 NN denotes Acdp
T388 505-513 NN denotes proteins
T389 521-525 RB denotes very
T390 526-532 JJ denotes strong
T391 536-546 NNS denotes homologies
T392 533-535 NN denotes AA
T393 547-549 IN denotes to
T394 550-553 DT denotes the
T395 568-575 NN denotes protein
T396 554-562 NNS denotes bacteria
T397 563-567 NN denotes CorC
T398 576-577 -LRB- denotes (
T399 584-592 NN denotes identity
T400 577-579 CD denotes 35
T401 579-580 NN denotes %
T402 581-583 NN denotes AA
T403 593-597 IN denotes with
T404 598-600 CD denotes 55
T405 600-601 NN denotes %
T406 602-610 NN denotes homology
T407 610-611 -RRB- denotes )
T408 611-613 , denotes ,
T409 613-618 WDT denotes which
T410 622-630 VBN denotes involved
T411 619-621 VBZ denotes is
T412 631-633 IN denotes in
T413 634-643 NN denotes magnesium
T414 655-661 NN denotes efflux
T415 644-647 CC denotes and
T416 648-654 NN denotes cobalt
T417 661-662 . denotes .
T418 662-834 sentence denotes The Acdp genes are widely expressed in all tissues tested except for Acdp1, which is only highly expressed in the brain with low levels of expression in kidney and testis.
T419 663-666 DT denotes The
T420 672-677 NNS denotes genes
T421 667-671 NN denotes Acdp
T422 689-698 VBN denotes expressed
T423 678-681 VBP denotes are
T424 682-688 RB denotes widely
T425 699-701 IN denotes in
T426 702-705 DT denotes all
T427 706-713 NNS denotes tissues
T428 714-720 VBN denotes tested
T429 721-727 IN denotes except
T430 728-731 IN denotes for
T431 732-737 NN denotes Acdp1
T432 737-739 , denotes ,
T433 739-744 WDT denotes which
T434 760-769 VBN denotes expressed
T435 745-747 VBZ denotes is
T436 748-752 RB denotes only
T437 753-759 RB denotes highly
T438 770-772 IN denotes in
T439 773-776 DT denotes the
T440 777-782 NN denotes brain
T441 783-787 IN denotes with
T442 792-798 NNS denotes levels
T443 788-791 JJ denotes low
T444 799-801 IN denotes of
T445 802-812 NN denotes expression
T446 813-815 IN denotes in
T447 816-822 NN denotes kidney
T448 823-826 CC denotes and
T449 827-833 NN denotes testis
T450 833-834 . denotes .
T451 834-941 sentence denotes Immunostaining of Acdp1 in hippocampus neurons revealed a predominant localization on the plasma membrane.
T452 835-849 NN denotes Immunostaining
T453 882-890 VBD denotes revealed
T454 850-852 IN denotes of
T455 853-858 NN denotes Acdp1
T456 859-861 IN denotes in
T457 862-873 NN denotes hippocampus
T458 874-881 NNS denotes neurons
T459 891-892 DT denotes a
T460 905-917 NN denotes localization
T461 893-904 JJ denotes predominant
T462 918-920 IN denotes on
T463 921-924 DT denotes the
T464 932-940 NN denotes membrane
T465 925-931 NN denotes plasma
T466 940-941 . denotes .
R58 T284 T285 det The,genes
R59 T285 T288 nsubj genes,contain
R60 T286 T285 nummod four,genes
R61 T287 T285 compound Acdp,genes
R62 T289 T285 punct (,genes
R63 T290 T285 appos Acdp1,genes
R64 T291 T290 punct ", ",Acdp1
R65 T292 T290 conj Acdp2,Acdp1
R66 T293 T292 punct ", ",Acdp2
R67 T294 T292 conj Acdp3,Acdp2
R68 T295 T294 cc and,Acdp3
R69 T296 T294 conj Acdp4,Acdp3
R70 T297 T288 punct ),contain
R71 T298 T299 nummod "3,631",bp
R72 T299 T288 dobj bp,contain
R73 T300 T299 punct ", ",bp
R74 T301 T302 nummod "3,244",bp
R75 T302 T299 conj bp,bp
R76 T303 T302 punct ", ",bp
R77 T304 T305 nummod "2,684",bp
R78 T305 T302 conj bp,bp
R79 T306 T305 cc and,bp
R80 T307 T308 nummod "2,743",bp
R81 T308 T305 conj bp,bp
R82 T309 T299 prep of,bp
R83 T310 T311 compound cDNA,sequences
R84 T311 T309 pobj sequences,of
R85 T312 T288 punct ", ",contain
R86 T313 T288 cc and,contain
R87 T314 T288 conj encode,contain
R88 T315 T316 amod deduced,proteins
R89 T316 T314 dobj proteins,encode
R90 T317 T316 prep of,proteins
R91 T318 T319 nummod 951,acids
R92 T319 T317 pobj acids,of
R93 T320 T318 punct ", ",951
R94 T321 T318 conj 874,951
R95 T322 T321 punct ", ",874
R96 T323 T321 conj 713,874
R97 T324 T323 cc and,713
R98 T325 T323 conj 771,713
R99 T326 T319 compound amino,acids
R100 T327 T314 punct ", ",encode
R101 T328 T314 advmod respectively,encode
R102 T329 T288 punct .,contain
R103 T331 T332 det The,genes
R104 T332 T335 nsubj genes,showed
R105 T333 T332 compound mouse,genes
R106 T334 T332 compound Acdp,genes
R107 T336 T337 advmod very,strong
R108 T337 T338 amod strong,homologies
R109 T338 T335 dobj homologies,showed
R110 T339 T340 punct (,%
R111 T340 T338 parataxis %,homologies
R112 T341 T342 punct >,90
R113 T342 T340 nummod 90,%
R114 T343 T340 punct ),%
R115 T344 T338 prep in,homologies
R116 T345 T346 preconj both,nucleotide
R117 T346 T347 nmod nucleotide,sequences
R118 T347 T344 pobj sequences,in
R119 T348 T346 cc and,nucleotide
R120 T349 T350 compound amino,acid
R121 T350 T346 conj acid,nucleotide
R122 T351 T338 prep to,homologies
R123 T352 T353 poss their,counterparts
R125 T354 T353 amod human,counterparts
R126 T355 T335 punct .,showed
R127 T357 T358 prep In,conserved
R128 T359 T357 pobj addition,In
R129 T360 T358 punct ", ",conserved
R130 T361 T362 preconj both,nucleotide
R131 T362 T363 nmod nucleotide,sequences
R132 T363 T358 nsubjpass sequences,conserved
R133 T364 T362 cc and,nucleotide
R134 T365 T366 compound amino,acid
R135 T366 T362 conj acid,nucleotide
R136 T367 T363 prep within,sequences
R137 T368 T369 det the,Domain
R138 T369 T367 pobj Domain,within
R139 T370 T369 amod Ancient,Domain
R140 T371 T369 amod Conserved,Domain
R141 T372 T369 punct (,Domain
R142 T373 T369 appos ACD,Domain
R143 T374 T358 punct ),conserved
R144 T375 T358 auxpass are,conserved
R145 T376 T358 advmod highly,conserved
R146 T377 T358 prep in,conserved
R147 T378 T379 amod many,species
R148 T379 T377 pobj species,in
R149 T380 T379 amod different,species
R150 T381 T379 amod taxonomic,species
R151 T382 T358 punct .,conserved
R152 T384 T385 advmod Particularly,showed
R153 T386 T385 punct ", ",showed
R154 T387 T388 compound Acdp,proteins
R155 T388 T385 nsubj proteins,showed
R156 T389 T390 advmod very,strong
R157 T390 T391 amod strong,homologies
R159 T392 T391 compound AA,homologies
R160 T393 T391 prep to,homologies
R161 T394 T395 det the,protein
R162 T395 T393 pobj protein,to
R163 T396 T395 compound bacteria,protein
R164 T397 T395 compound CorC,protein
R165 T398 T399 punct (,identity
R166 T399 T395 parataxis identity,protein
R167 T400 T401 nummod 35,%
R168 T401 T399 compound %,identity
R169 T402 T399 compound AA,identity
R170 T403 T399 prep with,identity
R171 T404 T405 nummod 55,%
R172 T405 T406 compound %,homology
R173 T406 T403 pobj homology,with
R174 T407 T399 punct ),identity
R175 T408 T395 punct ", ",protein
R176 T409 T410 dep which,involved
R178 T411 T410 auxpass is,involved
R179 T412 T410 prep in,involved
R180 T413 T414 nmod magnesium,efflux
R181 T414 T412 pobj efflux,in
R182 T415 T413 cc and,magnesium
R183 T416 T413 conj cobalt,magnesium
R184 T417 T385 punct .,showed
R185 T419 T420 det The,genes
R187 T421 T420 compound Acdp,genes
R188 T423 T422 auxpass are,expressed
R189 T424 T422 advmod widely,expressed
R190 T425 T422 prep in,expressed
R191 T426 T427 det all,tissues
R192 T427 T425 pobj tissues,in
R193 T428 T427 acl tested,tissues
R194 T429 T422 prep except,expressed
R195 T430 T429 prep for,except
R196 T431 T430 pobj Acdp1,for
R197 T432 T431 punct ", ",Acdp1
R198 T433 T434 dep which,expressed
R199 T434 T431 relcl expressed,Acdp1
R200 T435 T434 auxpass is,expressed
R201 T436 T434 advmod only,expressed
R202 T437 T434 advmod highly,expressed
R203 T438 T434 prep in,expressed
R204 T439 T440 det the,brain
R205 T440 T438 pobj brain,in
R206 T441 T442 mark with,levels
R208 T443 T442 amod low,levels
R209 T444 T442 prep of,levels
R210 T445 T444 pobj expression,of
R211 T446 T442 prep in,levels
R212 T447 T446 pobj kidney,in
R213 T448 T447 cc and,kidney
R214 T449 T447 conj testis,kidney
R215 T450 T422 punct .,expressed
R216 T452 T453 nsubj Immunostaining,revealed
R217 T454 T452 prep of,Immunostaining
R218 T455 T454 pobj Acdp1,of
R219 T456 T455 prep in,Acdp1
R220 T457 T458 compound hippocampus,neurons
R221 T458 T456 pobj neurons,in
R222 T459 T460 det a,localization
R224 T461 T460 amod predominant,localization
R225 T462 T453 prep on,revealed
R226 T463 T464 det the,membrane
R228 T465 T464 compound plasma,membrane
R229 T466 T453 punct .,revealed
R124 T353 T351 pobj counterparts,to
R158 T391 T385 dobj homologies,showed
R177 T410 T395 relcl involved,protein
R186 T420 T422 nsubjpass genes,expressed
R207 T442 T434 advcl levels,expressed
R223 T460 T453 dobj localization,revealed
R227 T464 T462 pobj membrane,on

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T69 14-19 SO:0000704 denotes genes
T70 21-26 PR:000005643 denotes Acdp1
T71 28-33 PR:000005644 denotes Acdp2
T72 35-40 PR:000005645 denotes Acdp3
T73 45-50 PR:000005646 denotes Acdp4
T74 66-68 SO:0000028 denotes bp
T75 76-78 SO:0000028 denotes bp
T76 86-88 SO:0000028 denotes bp
T77 99-101 SO:0000028 denotes bp
T78 205-210 NCBITaxon:10088 denotes mouse
T79 216-221 SO:0000704 denotes genes
T80 241-251 SO:0000857 denotes homologies
T81 312-317 NCBITaxon:9606 denotes human
T82 415-421 SO:0000417 denotes Domain
T83 467-484 NCBITaxon:species denotes taxonomic species
T84 536-546 SO:0000857 denotes homologies
T85 554-562 NCBITaxon:2 denotes bacteria
T86 563-567 PR:000022321 denotes CorC
T87 602-610 SO:0000857 denotes homology
T88 672-677 SO:0000704 denotes genes
T89 689-698 GO:0010467 denotes expressed
T90 706-713 UBERON:0000479 denotes tissues
T91 732-737 PR:000005643 denotes Acdp1
T92 760-769 GO:0010467 denotes expressed
T93 777-782 UBERON:0000955 denotes brain
T94 802-812 GO:0010467 denotes expression
T95 816-822 UBERON:0002113 denotes kidney
T96 827-833 UBERON:0000473 denotes testis
T97 853-858 PR:000005643 denotes Acdp1
T98 862-881 CL:0002608 denotes hippocampus neurons
T99 925-940 GO:0005886 denotes plasma membrane

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T136 9-13 PR_EXT:ACDP_or_CNNM denotes Acdp
T137 14-19 SO_EXT:0000704 denotes genes
T138 21-26 PR_EXT:000005643 denotes Acdp1
T139 28-33 PR_EXT:000005644 denotes Acdp2
T140 35-40 PR_EXT:000005645 denotes Acdp3
T141 45-50 PR_EXT:000005646 denotes Acdp4
T142 66-68 SO_EXT:0000028 denotes bp
T143 76-78 SO_EXT:0000028 denotes bp
T144 86-88 SO_EXT:0000028 denotes bp
T145 99-101 SO_EXT:0000028 denotes bp
T146 105-109 SO_EXT:cDNA denotes cDNA
T147 110-119 SO_EXT:biological_sequence denotes sequences
T148 125-131 SO_EXT:sequence_coding_function denotes encode
T149 140-148 CHEBI_PR_EXT:protein denotes proteins
T150 174-185 CHEBI_SO_EXT:amino_acid denotes amino acids
T151 205-210 NCBITaxon:10088 denotes mouse
T152 211-215 PR_EXT:ACDP_or_CNNM denotes Acdp
T153 216-221 SO_EXT:0000704 denotes genes
T154 241-251 SO:0000857 denotes homologies
T155 267-277 CHEBI_SO_EXT:nucleotide denotes nucleotide
T156 282-292 CHEBI_SO_EXT:amino_acid denotes amino acid
T157 293-302 SO_EXT:biological_sequence denotes sequences
T158 312-317 NCBITaxon:9606 denotes human
T159 350-360 CHEBI_SO_EXT:nucleotide denotes nucleotide
T160 365-375 CHEBI_SO_EXT:amino_acid denotes amino acid
T161 376-385 SO_EXT:biological_sequence denotes sequences
T162 405-414 SO_EXT:biological_conservation_process_or_quality denotes Conserved
T163 415-421 SO_EXT:0000417 denotes Domain
T164 439-448 SO_EXT:biological_conservation_process_or_quality denotes conserved
T165 467-484 NCBITaxon:species denotes taxonomic species
T166 500-504 PR_EXT:ACDP_or_CNNM denotes Acdp
T167 505-513 CHEBI_PR_EXT:protein denotes proteins
T168 533-535 CHEBI_SO_EXT:amino_acid denotes AA
T169 536-546 SO:0000857 denotes homologies
T170 554-562 NCBITaxon:2 denotes bacteria
T171 563-567 PR_EXT:000022321 denotes CorC
T172 568-575 CHEBI_PR_EXT:protein denotes protein
T173 581-583 CHEBI_SO_EXT:amino_acid denotes AA
T174 602-610 SO:0000857 denotes homology
T175 634-643 CHEBI_EXT:magnesium denotes magnesium
T176 648-654 CHEBI_EXT:cobalt denotes cobalt
T177 667-671 PR_EXT:ACDP_or_CNNM denotes Acdp
T178 672-677 SO_EXT:0000704 denotes genes
T179 689-698 GO:0010467 denotes expressed
T180 706-713 UBERON:0000479 denotes tissues
T181 732-737 PR_EXT:000005643 denotes Acdp1
T182 760-769 GO:0010467 denotes expressed
T183 777-782 UBERON:0000955 denotes brain
T184 802-812 GO:0010467 denotes expression
T185 816-822 UBERON:0002113 denotes kidney
T186 827-833 UBERON:0000473 denotes testis
T187 853-858 PR_EXT:000005643 denotes Acdp1
T188 862-873 UBERON_EXT:hippocampus_proper_or_hippocampal_formation denotes hippocampus
T189 862-881 CL:0002608 denotes hippocampus neurons
T190 905-917 GO_PATO_EXT:biological_localization_process_or_quality denotes localization
T191 925-940 GO:0005886 denotes plasma membrane