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PMC:340383 / 19027-19658 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T4786 630-631 . denotes .
T4785 629-630 -RRB- denotes ]
T4784 627-628 , denotes ,
T4783 626-627 CD denotes 3
T4782 628-629 CD denotes 4
T4781 625-626 -LRB- denotes [
T4780 618-624 RBR denotes longer
T4779 615-617 CC denotes or
T4778 605-614 NN denotes overnight
T4777 601-604 IN denotes for
T4776 595-600 NNS denotes films
T4775 589-594 NN denotes X-ray
T4774 586-588 IN denotes to
T4773 573-577 VBD denotes were
T4772 578-585 VBN denotes exposed
T4771 565-572 NNS denotes filters
T4770 558-564 JJ denotes Washed
T4769 557-631 sentence denotes Washed filters were exposed to X-ray films for overnight or longer [3,4].
T4768 556-557 . denotes .
T4767 552-553 HYPH denotes -
T4766 553-556 NN denotes min
T4765 550-552 CD denotes 15
T4764 546-549 IN denotes for
T4763 543-545 NN denotes °C
T4762 541-543 CD denotes 65
T4761 538-540 IN denotes at
T4760 536-537 -RRB- denotes )
T4759 531-532 NN denotes %
T4758 528-531 CD denotes 0.1
T4757 526-528 , denotes ,
T4756 522-523 SYM denotes ×
T4755 523-526 NN denotes SSC
T4754 518-522 CD denotes 0.25
T4753 533-536 NN denotes SDS
T4752 517-518 -LRB- denotes (
T4751 514-516 CD denotes II
T4750 507-513 NN denotes buffer
T4749 499-506 NN denotes washing
T4748 494-498 IN denotes with
T4747 488-493 RB denotes twice
T4746 481-487 VBD denotes washed
T4745 476-480 RB denotes then
T4744 472-475 CC denotes and
T4743 470-472 , denotes ,
T4742 466-467 HYPH denotes -
T4741 467-470 NN denotes min
T4740 464-466 CD denotes 15
T4739 460-463 IN denotes for
T4738 457-459 NN denotes °C
T4737 455-457 CD denotes 42
T4736 452-454 IN denotes at
T4735 450-451 -RRB- denotes )
T4734 445-446 NN denotes %
T4733 442-445 CD denotes 0.1
T4732 440-442 , denotes ,
T4731 436-437 SYM denotes ×
T4730 437-440 NN denotes SSC
T4729 435-436 CD denotes 2
T4728 447-450 NN denotes SDS
T4727 434-435 -LRB- denotes (
T4726 432-433 CD denotes I
T4725 425-431 NN denotes buffer
T4724 417-424 VBG denotes washing
T4723 412-416 IN denotes with
T4722 406-411 RB denotes twice
T4721 394-398 VBD denotes were
T4720 399-405 VBN denotes washed
T4719 386-393 NNS denotes filters
T4718 382-385 DT denotes The
T4717 381-557 sentence denotes The filters were washed twice with washing buffer I (2×SSC, 0.1% SDS) at 42°C for 15-min, and then washed twice with washing buffer II (0.25×SSC, 0.1% SDS) at 65°C for 15-min.
T4716 380-381 . denotes .
T4715 371-380 RB denotes overnight
T4714 367-370 RP denotes out
T4713 354-358 VBD denotes were
T4712 359-366 VBN denotes carried
T4711 339-353 NNS denotes Hybridizations
T4710 338-381 sentence denotes Hybridizations were carried out overnight.
T4709 337-338 . denotes .
T4708 336-337 -RRB- denotes )
T4707 319-323 NNP denotes Life
T4706 324-336 NNP denotes Technologies
T4705 318-319 -LRB- denotes (
T4704 301-310 NN denotes extension
T4703 294-300 NN denotes primer
T4702 287-293 JJ denotes random
T4701 311-317 NN denotes system
T4700 283-286 DT denotes the
T4699 277-282 VBG denotes using
T4698 272-276 NN denotes dCTP
T4697 267-268 HYPH denotes -
T4696 268-271 NN denotes 32P
T4695 266-267 NN denotes α
T4694 261-265 IN denotes with
T4693 253-260 VBN denotes labeled
T4692 233-245 JJ denotes untranslated
T4691 231-232 SYM denotes '
T4690 246-252 NN denotes region
T4689 230-231 CD denotes 3
T4688 226-229 DT denotes the
T4687 222-225 CC denotes and
T4686 217-221 NN denotes exon
T4685 212-216 JJ denotes last
T4684 207-211 IN denotes from
T4683 205-206 -RRB- denotes )
T4682 199-202 CD denotes 350
T4681 192-198 IN denotes around
T4680 203-205 NN denotes bp
T4679 191-192 -LRB- denotes (
T4678 178-181 NN denotes PCR
T4677 182-190 NN denotes fragment
T4676 176-177 DT denotes a
T4675 171-175 IN denotes with
T4674 161-165 NN denotes Acdp
T4673 166-170 NN denotes gene
T4672 156-160 DT denotes each
T4671 152-155 IN denotes for
T4670 140-144 VBD denotes were
T4669 145-151 VBN denotes probed
T4668 132-139 NNS denotes filters
T4667 128-131 DT denotes The
T4666 127-338 sentence denotes The filters were probed for each Acdp gene with a PCR fragment (around 350 bp) from last exon and the 3' untranslated region labeled with α-32P dCTP using the random primer extension system (Life Technologies).
T4665 126-127 . denotes .
T4664 119-126 NNP denotes Origene
T4663 114-118 IN denotes from
T4662 99-103 VBD denotes were
T4661 85-90 NN denotes mouse
T4660 75-84 JJ denotes different
T4659 91-98 NNS denotes tissues
T4658 72-74 CD denotes 12
T4657 61-71 VBG denotes containing
T4656 104-113 VBN denotes purchased
T4655 48-52 NN denotes Blot
T4654 39-47 NNP denotes Northern
T4653 32-38 NN denotes Choice
T4652 53-60 NNS denotes filters
T4651 23-31 JJ denotes Multiple
T4650 22-127 sentence denotes Multiple Choice Northern Blot filters containing 12 different mouse tissues were purchased from Origene.
T4649 14-22 NNS denotes analyses
T4648 9-13 NN denotes blot
T4647 0-8 NNP denotes Northern
R2774 T4647 T4648 compound Northern,blot
R2775 T4648 T4649 compound blot,analyses
R2776 T4651 T4652 amod Multiple,filters
R2777 T4652 T4656 nsubjpass filters,purchased
R2778 T4653 T4652 compound Choice,filters
R2779 T4654 T4655 compound Northern,Blot
R2780 T4655 T4652 compound Blot,filters
R2781 T4657 T4652 acl containing,filters
R2782 T4658 T4659 nummod 12,tissues
R2783 T4659 T4657 dobj tissues,containing
R2784 T4660 T4659 amod different,tissues
R2785 T4661 T4659 compound mouse,tissues
R2786 T4662 T4656 auxpass were,purchased
R2787 T4663 T4656 prep from,purchased
R2788 T4664 T4663 pobj Origene,from
R2789 T4665 T4656 punct .,purchased
R2790 T4667 T4668 det The,filters
R2791 T4668 T4669 nsubjpass filters,probed
R2792 T4670 T4669 auxpass were,probed
R2793 T4671 T4669 prep for,probed
R2794 T4672 T4673 det each,gene
R2795 T4673 T4671 pobj gene,for
R2796 T4674 T4673 compound Acdp,gene
R2797 T4675 T4669 prep with,probed
R2798 T4676 T4677 det a,fragment
R2799 T4677 T4675 pobj fragment,with
R2800 T4678 T4677 compound PCR,fragment
R2801 T4679 T4680 punct (,bp
R2802 T4680 T4677 parataxis bp,fragment
R2803 T4681 T4682 quantmod around,350
R2804 T4682 T4680 nummod 350,bp
R2805 T4683 T4680 punct ),bp
R2806 T4684 T4677 prep from,fragment
R2807 T4685 T4686 amod last,exon
R2808 T4686 T4684 pobj exon,from
R2809 T4687 T4669 cc and,probed
R2810 T4688 T4689 det the,3
R2811 T4689 T4690 nummod 3,region
R2812 T4690 T4693 nsubj region,labeled
R2813 T4691 T4689 punct ',3
R2814 T4692 T4689 amod untranslated,3
R2815 T4693 T4669 conj labeled,probed
R2816 T4694 T4693 prep with,labeled
R2817 T4695 T4696 compound α,32P
R2818 T4696 T4698 compound 32P,dCTP
R2819 T4697 T4696 punct -,32P
R2820 T4698 T4694 pobj dCTP,with
R2821 T4699 T4693 advcl using,labeled
R2822 T4700 T4701 det the,system
R2823 T4701 T4699 dobj system,using
R2824 T4702 T4701 amod random,system
R2825 T4703 T4701 compound primer,system
R2826 T4704 T4701 compound extension,system
R2827 T4705 T4706 punct (,Technologies
R2828 T4706 T4701 parataxis Technologies,system
R2829 T4707 T4706 compound Life,Technologies
R2830 T4708 T4706 punct ),Technologies
R2831 T4709 T4693 punct .,labeled
R2832 T4711 T4712 nsubjpass Hybridizations,carried
R2833 T4713 T4712 auxpass were,carried
R2834 T4714 T4712 prt out,carried
R2835 T4715 T4712 advmod overnight,carried
R2836 T4716 T4712 punct .,carried
R2837 T4718 T4719 det The,filters
R2838 T4719 T4720 nsubjpass filters,washed
R2839 T4721 T4720 auxpass were,washed
R2840 T4722 T4720 advmod twice,washed
R2841 T4723 T4720 prep with,washed
R2842 T4724 T4725 amod washing,buffer
R2843 T4725 T4723 pobj buffer,with
R2844 T4726 T4725 nummod I,buffer
R2845 T4727 T4728 punct (,SDS
R2846 T4728 T4725 parataxis SDS,buffer
R2847 T4729 T4730 nummod 2,SSC
R2848 T4730 T4728 dep SSC,SDS
R2849 T4731 T4730 punct ×,SSC
R2850 T4732 T4728 punct ", ",SDS
R2851 T4733 T4734 nummod 0.1,%
R2852 T4734 T4728 compound %,SDS
R2853 T4735 T4728 punct ),SDS
R2854 T4736 T4720 prep at,washed
R2855 T4737 T4738 nummod 42,°C
R2856 T4738 T4736 pobj °C,at
R2857 T4739 T4720 prep for,washed
R2858 T4740 T4741 nummod 15,min
R2859 T4741 T4739 pobj min,for
R2860 T4742 T4741 punct -,min
R2861 T4743 T4720 punct ", ",washed
R2862 T4744 T4720 cc and,washed
R2863 T4745 T4746 advmod then,washed
R2864 T4746 T4720 conj washed,washed
R2865 T4747 T4746 advmod twice,washed
R2866 T4748 T4746 prep with,washed
R2867 T4749 T4750 compound washing,buffer
R2868 T4750 T4748 pobj buffer,with
R2869 T4751 T4750 nummod II,buffer
R2870 T4752 T4753 punct (,SDS
R2871 T4753 T4750 parataxis SDS,buffer
R2872 T4754 T4755 nummod 0.25,SSC
R2873 T4755 T4753 dep SSC,SDS
R2874 T4756 T4755 punct ×,SSC
R2875 T4757 T4753 punct ", ",SDS
R2876 T4758 T4759 nummod 0.1,%
R2877 T4759 T4753 compound %,SDS
R2878 T4760 T4753 punct ),SDS
R2879 T4761 T4746 prep at,washed
R2880 T4762 T4763 nummod 65,°C
R2881 T4763 T4761 pobj °C,at
R2882 T4764 T4746 prep for,washed
R2883 T4765 T4766 nummod 15,min
R2884 T4766 T4764 pobj min,for
R2885 T4767 T4766 punct -,min
R2886 T4768 T4720 punct .,washed
R2887 T4770 T4771 amod Washed,filters
R2888 T4771 T4772 nsubjpass filters,exposed
R2889 T4773 T4772 auxpass were,exposed
R2890 T4774 T4772 prep to,exposed
R2891 T4775 T4776 compound X-ray,films
R2892 T4776 T4774 pobj films,to
R2893 T4777 T4772 prep for,exposed
R2894 T4778 T4777 pcomp overnight,for
R2895 T4779 T4778 cc or,overnight
R2896 T4780 T4778 conj longer,overnight
R2897 T4781 T4782 punct [,4
R2898 T4782 T4772 parataxis 4,exposed
R2899 T4783 T4782 nummod 3,4
R2900 T4784 T4782 punct ",",4
R2901 T4785 T4782 punct ],4
R2902 T4786 T4772 punct .,exposed

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T4627 533-536 CHEBI:8984 denotes SDS
T4626 447-450 CHEBI:8984 denotes SDS
T4625 339-353 GO:0097617 denotes Hybridizations
T4624 294-300 SO:0000112 denotes primer
T4623 268-271 CHEBI:37972 denotes 32P
T4622 235-245 GO:0006412 denotes translated
T4621 230-252 SO:0000205 denotes 3' untranslated region
T4620 217-221 SO:0000147 denotes exon
T4619 203-205 SO:0000028 denotes bp
T4618 166-170 SO:0000704 denotes gene
T4617 91-98 UBERON:0000479 denotes tissues
T4616 85-90 NCBITaxon:10088 denotes mouse

2_test

Id Subject Object Predicate Lexical cue
14723793-11595174-10642195 626-627 11595174 denotes 3
14723793-10550218-10642196 628-629 10550218 denotes 4

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T4646 533-536 CHEBI:8984 denotes SDS
T4645 523-526 CHEBI_EXT:saline_sodium_citrate denotes SSC
T4644 507-513 CHEBI_CHMO_EXT:buffer_solution denotes buffer
T4643 447-450 CHEBI:8984 denotes SDS
T4642 437-440 CHEBI_EXT:saline_sodium_citrate denotes SSC
T4641 425-431 CHEBI_CHMO_EXT:buffer_solution denotes buffer
T4640 339-353 GO:0097617 denotes Hybridizations
T4639 294-300 SO_EXT:0000112 denotes primer
T4638 272-276 CHEBI_EXT:dCTP denotes dCTP
T4637 268-271 CHEBI:37972 denotes 32P
T4636 253-260 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labeled
T4635 235-245 GO:0006412 denotes translated
T4634 230-252 SO_EXT:0000205 denotes 3' untranslated region
T4633 217-221 SO_EXT:0000147 denotes exon
T4632 203-205 SO_EXT:0000028 denotes bp
T4631 166-170 SO_EXT:0000704 denotes gene
T4630 161-165 PR_EXT:ACDP_or_CNNM denotes Acdp
T4629 91-98 UBERON:0000479 denotes tissues
T4628 85-90 NCBITaxon:10088 denotes mouse