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PMC:3359311 / 9636-9899 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3484 0-4 P08571 denotes CD14

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T3576 0-4 Protein denotes CD14
T3577 95-104 Protein denotes caspase-1
T3578 147-151 Protein denotes PAO1
T3579 174-181 Protein denotes Fig. 4a
T3580 254-261 Protein denotes Fig. 4b
T3581 105-115 Positive_regulation denotes activation
T3582 83-91 Positive_regulation denotes increase
R3098 T3577 T3581 themeOf caspase-1,activation
R3099 T3581 T3582 themeOf activation,increase

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3515 0-4 CD denotes CD14
T3516 5-13 JJ denotes positive
T3517 14-23 NNS denotes monocytes
T3518 24-28 IN denotes from
T3519 29-31 NNP denotes CF
T3520 32-40 NNS denotes patients
T3521 41-44 CC denotes and
T3522 45-52 JJ denotes healthy
T3523 53-61 NNS denotes controls
T3524 62-68 VBD denotes showed
T3525 69-70 DT denotes a
T3526 71-82 JJ denotes significant
T3527 83-91 NN denotes increase
T3528 92-94 IN denotes in
T3529 95-104 JJ denotes caspase-1
T3530 105-115 NN denotes activation
T3531 116-120 IN denotes upon
T3532 121-132 NN denotes stimulation
T3533 133-137 IN denotes with
T3534 138-145 NNP denotes LPS+ATP
T3535 145-146 , denotes ,
T3536 147-151 NNP denotes PAO1
T3537 151-152 , denotes ,
T3538 153-156 CC denotes and
T3539 157-162 NNP denotes LPS+P
T3540 162-165 NN denotes oly
T3541 165-166 -LRB- denotes (
T3542 166-168 NN denotes dA
T3543 168-169 : denotes :
T3544 169-171 NN denotes dT
T3545 171-172 -RRB- denotes )
T3546 173-174 -LRB- denotes (
T3547 174-178 NNP denotes Fig.
T3548 179-181 CD denotes 4a
T3549 181-182 -RRB- denotes )
T3550 183-186 CC denotes but
T3551 187-191 DT denotes this
T3552 192-202 NN denotes activation
T3553 203-206 VBD denotes was
T3554 207-210 RB denotes not
T3555 211-220 JJ denotes different
T3556 221-228 IN denotes between
T3557 229-231 NNP denotes CF
T3558 232-235 CC denotes and
T3559 236-243 VB denotes control
T3560 244-252 NNS denotes subjects
T3561 253-254 -LRB- denotes (
T3562 254-258 NNP denotes Fig.
T3563 259-261 CD denotes 4b
T3564 261-262 -RRB- denotes )
T3565 262-263 . denotes .
R3046 T3515 T3517 nummod CD14,monocytes
R3047 T3516 T3517 amod positive,monocytes
R3048 T3517 T3524 nsubj monocytes,showed
R3049 T3518 T3517 prep from,monocytes
R3050 T3519 T3520 compound CF,patients
R3051 T3520 T3518 pobj patients,from
R3052 T3521 T3520 cc and,patients
R3053 T3522 T3523 amod healthy,controls
R3054 T3523 T3520 conj controls,patients
R3055 T3524 T3524 ROOT showed,showed
R3056 T3525 T3527 det a,increase
R3057 T3526 T3527 amod significant,increase
R3058 T3527 T3524 dobj increase,showed
R3059 T3528 T3527 prep in,increase
R3060 T3529 T3530 amod caspase-1,activation
R3061 T3530 T3528 pobj activation,in
R3062 T3531 T3530 prep upon,activation
R3063 T3532 T3531 pobj stimulation,upon
R3064 T3533 T3524 prep with,showed
R3065 T3534 T3533 pobj LPS+ATP,with
R3066 T3535 T3534 punct ",",LPS+ATP
R3067 T3536 T3534 conj PAO1,LPS+ATP
R3068 T3537 T3536 punct ",",PAO1
R3069 T3538 T3536 cc and,PAO1
R3070 T3539 T3540 compound LPS+P,oly
R3071 T3540 T3536 conj oly,PAO1
R3072 T3541 T3544 punct (,dT
R3073 T3542 T3544 nmod dA,dT
R3074 T3543 T3544 punct :,dT
R3075 T3544 T3540 appos dT,oly
R3076 T3545 T3544 punct ),dT
R3077 T3546 T3547 punct (,Fig.
R3078 T3547 T3540 appos Fig.,oly
R3079 T3548 T3547 nummod 4a,Fig.
R3080 T3549 T3540 punct ),oly
R3081 T3550 T3540 cc but,oly
R3082 T3551 T3552 det this,activation
R3083 T3552 T3553 nsubj activation,was
R3084 T3553 T3524 conj was,showed
R3085 T3554 T3553 neg not,was
R3086 T3555 T3553 acomp different,was
R3087 T3556 T3555 prep between,different
R3088 T3557 T3560 nmod CF,subjects
R3089 T3558 T3557 cc and,CF
R3090 T3559 T3557 conj control,CF
R3091 T3560 T3556 pobj subjects,between
R3092 T3561 T3564 punct (,)
R3093 T3562 T3564 nmod Fig.,)
R3094 T3563 T3562 nummod 4b,Fig.
R3095 T3564 T3553 punct ),was
R3096 T3565 T3524 punct .,showed

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3433 0-4 NN denotes CD14
T3434 5-13 JJ denotes positive
T3435 14-23 NN denotes monocytes
T3436 24-28 IN denotes from
T3437 29-31 NN denotes CF
T3438 32-40 NN denotes patients
T3439 41-44 CC denotes and
T3440 45-52 JJ denotes healthy
T3441 53-61 NN denotes controls
T3442 62-68 VB denotes showed
T3443 69-70 DT denotes a
T3444 71-82 JJ denotes significant
T3445 83-91 NN denotes increase
T3446 92-94 IN denotes in
T3447 95-104 NN denotes caspase-1
T3448 105-115 NN denotes activation
T3449 116-120 IN denotes upon
T3450 121-132 NN denotes stimulation
T3451 133-137 IN denotes with
T3452 138-145 NN denotes LPS+ATP
T3453 145-146 -COMMA- denotes ,
T3454 147-151 NN denotes PAO1
T3455 151-152 -COMMA- denotes ,
T3456 153-156 CC denotes and
T3457 157-165 NN denotes LPS+Poly
T3458 165-166 -LRB- denotes (
T3459 166-168 NN denotes dA
T3460 168-169 -COLON- denotes :
T3461 169-171 NN denotes dT
T3462 171-172 -RRB- denotes )
T3463 173-174 -LRB- denotes (
T3464 174-178 NN denotes Fig.
T3465 179-181 NN denotes 4a
T3466 181-182 -RRB- denotes )
T3467 183-186 CC denotes but
T3468 187-191 DT denotes this
T3469 192-202 NN denotes activation
T3470 203-206 VB denotes was
T3471 207-210 RB denotes not
T3472 211-220 JJ denotes different
T3473 221-228 IN denotes between
T3474 229-231 NN denotes CF
T3475 232-235 CC denotes and
T3476 236-243 NN denotes control
T3477 244-252 NN denotes subjects
T3478 253-254 -LRB- denotes (
T3479 254-258 NNP denotes Fig.
T3480 259-261 NN denotes 4b
T3481 261-262 -RRB- denotes )
R2966 T3435 T3433 arg1Of monocytes,CD14
R2967 T3435 T3434 arg1Of monocytes,positive
R2968 T3435 T3436 arg1Of monocytes,from
R2969 T3435 T3442 arg1Of monocytes,showed
R2970 T3438 T3437 arg1Of patients,CF
R2971 T3438 T3439 arg1Of patients,and
R2972 T3439 T3436 arg2Of and,from
R2973 T3441 T3439 arg2Of controls,and
R2974 T3441 T3440 arg1Of controls,healthy
R2975 T3442 T3467 arg1Of showed,but
R2976 T3445 T3442 arg2Of increase,showed
R2977 T3445 T3443 arg1Of increase,a
R2978 T3445 T3444 arg1Of increase,significant
R2979 T3445 T3446 arg1Of increase,in
R2980 T3445 T3449 arg1Of increase,upon
R2981 T3445 T3451 arg1Of increase,with
R2982 T3448 T3446 arg2Of activation,in
R2983 T3448 T3447 arg1Of activation,caspase-1
R2984 T3450 T3449 arg2Of stimulation,upon
R2985 T3452 T3453 arg1Of LPS+ATP,","
R2986 T3453 T3456 arg1Of ",",and
R2987 T3454 T3453 arg2Of PAO1,","
R2988 T3456 T3451 arg2Of and,with
R2989 T3456 T3455 arg1Of and,","
R2990 T3456 T3458 arg1Of and,(
R2991 T3456 T3463 arg1Of and,(
R2992 T3457 T3456 arg2Of LPS+Poly,and
R2993 T3459 T3458 arg2Of dA,(
R2994 T3459 T3460 arg1Of dA,:
R2995 T3459 T3461 arg1Of dA,dT
R2996 T3462 T3458 arg3Of ),(
R2997 T3465 T3463 arg2Of 4a,(
R2998 T3465 T3464 arg1Of 4a,Fig.
R2999 T3466 T3463 arg3Of ),(
R3000 T3469 T3468 arg1Of activation,this
R3001 T3469 T3470 arg1Of activation,was
R3002 T3469 T3472 arg1Of activation,different
R3003 T3470 T3467 arg2Of was,but
R3004 T3470 T3471 arg1Of was,not
R3005 T3472 T3470 arg2Of different,was
R3006 T3472 T3473 arg1Of different,between
R3007 T3474 T3475 arg1Of CF,and
R3008 T3476 T3475 arg2Of control,and
R3009 T3477 T3473 arg2Of subjects,between
R3010 T3477 T3474 arg1Of subjects,CF
R3011 T3477 T3476 arg1Of subjects,control
R3012 T3477 T3478 arg1Of subjects,(
R3013 T3480 T3478 arg2Of 4b,(
R3014 T3480 T3479 arg1Of 4b,Fig.
R3015 T3481 T3478 arg3Of ),(

sentences

Id Subject Object Predicate Lexical cue
T3403 0-263 Sentence denotes CD14 positive monocytes from CF patients and healthy controls showed a significant increase in caspase-1 activation upon stimulation with LPS+ATP, PAO1, and LPS+Poly(dA:dT) (Fig. 4a) but this activation was not different between CF and control subjects (Fig. 4b).
T71 0-263 Sentence denotes CD14 positive monocytes from CF patients and healthy controls showed a significant increase in caspase-1 activation upon stimulation with LPS+ATP, PAO1, and LPS+Poly(dA:dT) (Fig. 4a) but this activation was not different between CF and control subjects (Fig. 4b).