PMC:3359311 / 3651-3978
Annnotations
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1647 | 4-9 | P01584 | denotes | IL-1β |
T1648 | 256-261 | P01584 | denotes | IL-1β |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2528 | 256-261 | Protein | denotes | IL-1β |
T2529 | 266-275 | Protein | denotes | pro-IL-18 |
T2530 | 317-326 | Localization | denotes | secretion |
T2531 | 317-326 | Localization | denotes | secretion |
R2192 | T2528 | T2530 | themeOf | IL-1β,secretion |
R2193 | T2529 | T2531 | themeOf | pro-IL-18,secretion |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2433 | 70-87 | http://purl.obolibrary.org/obo/GO_0043234 | denotes | protein complexes |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2418 | 270-275 | http://purl.obolibrary.org/obo/GO_0045515 | denotes | IL-18 |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2407 | 158-166 | http://purl.obolibrary.org/obo/GO_0007349 | denotes | cellular |
T2408 | 203-224 | http://purl.obolibrary.org/obo/GO_0006919 | denotes | activation of caspase |
T2409 | 317-326 | http://purl.obolibrary.org/obo/GO_0046903 | denotes | secretion |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1956 | 0-9 | NNP | denotes | Pro-IL-1β |
T1957 | 10-12 | VBZ | denotes | is |
T1958 | 13-25 | RB | denotes | subsequently |
T1959 | 26-35 | VBN | denotes | converted |
T1960 | 36-40 | IN | denotes | into |
T1961 | 41-44 | PRP$ | denotes | its |
T1962 | 45-51 | JJ | denotes | active |
T1963 | 52-56 | NN | denotes | form |
T1964 | 57-59 | IN | denotes | by |
T1965 | 60-69 | JJ | denotes | cytosolic |
T1966 | 70-77 | NN | denotes | protein |
T1967 | 78-87 | NNS | denotes | complexes |
T1968 | 88-94 | VBD | denotes | termed |
T1969 | 96-109 | NNS | denotes | inflammasomes |
T1970 | 109-110 | . | denotes | . |
T1971 | 112-125 | NNS | denotes | Inflammasomes |
T1972 | 126-134 | VBP | denotes | assemble |
T1973 | 135-137 | IN | denotes | in |
T1974 | 138-146 | NN | denotes | response |
T1975 | 147-149 | TO | denotes | to |
T1976 | 150-157 | JJ | denotes | certain |
T1977 | 158-166 | JJ | denotes | cellular |
T1978 | 167-173 | NN | denotes | danger |
T1979 | 174-181 | NNS | denotes | signals |
T1980 | 182-185 | CC | denotes | and |
T1981 | 186-193 | VB | denotes | mediate |
T1982 | 194-197 | DT | denotes | the |
T1983 | 198-213 | NN | denotes | auto-activation |
T1984 | 214-216 | IN | denotes | of |
T1985 | 217-226 | JJ | denotes | caspase-1 |
T1986 | 227-228 | NN | denotes | [ |
T1987 | 228-229 | CD | denotes | 9 |
T1988 | 229-230 | NNP | denotes | ] |
T1989 | 230-231 | , | denotes | , |
T1990 | 232-233 | NNP | denotes | [ |
T1991 | 233-235 | CD | denotes | 11 |
T1992 | 235-236 | NNP | denotes | ] |
T1993 | 236-237 | , | denotes | , |
T1994 | 238-243 | WDT | denotes | which |
T1995 | 244-251 | VBZ | denotes | cleaves |
T1996 | 252-261 | NN | denotes | pro-IL-1β |
T1997 | 262-265 | CC | denotes | and |
T1998 | 266-275 | NN | denotes | pro-IL-18 |
T1999 | 276-280 | IN | denotes | into |
T2000 | 281-286 | PRP$ | denotes | their |
T2001 | 287-299 | RB | denotes | biologically |
T2002 | 300-306 | JJ | denotes | active |
T2003 | 307-312 | NNS | denotes | forms |
T2004 | 313-316 | IN | denotes | for |
T2005 | 317-326 | NN | denotes | secretion |
T2006 | 326-327 | . | denotes | . |
R1642 | T1956 | T1959 | nsubjpass | Pro-IL-1β,converted |
R1644 | T1957 | T1959 | auxpass | is,converted |
R1646 | T1958 | T1959 | advmod | subsequently,converted |
R1651 | T1959 | T1959 | ROOT | converted,converted |
R1659 | T1960 | T1959 | prep | into,converted |
R1663 | T1961 | T1963 | poss | its,form |
R1667 | T1962 | T1963 | amod | active,form |
R1669 | T1963 | T1960 | pobj | form,into |
R1674 | T1964 | T1959 | agent | by,converted |
R1677 | T1965 | T1967 | amod | cytosolic,complexes |
R1681 | T1966 | T1967 | compound | protein,complexes |
R1684 | T1967 | T1964 | pobj | complexes,by |
R1687 | T1968 | T1968 | ROOT | termed,termed |
R1688 | T1969 | T1968 | oprd | inflammasomes,termed |
R1691 | T1970 | T1959 | punct | .,converted |
R1694 | T1971 | T1972 | nsubj | Inflammasomes,assemble |
R1697 | T1972 | T1972 | ROOT | assemble,assemble |
R1700 | T1973 | T1972 | prep | in,assemble |
R1705 | T1974 | T1973 | pobj | response,in |
R1708 | T1975 | T1974 | prep | to,response |
R1711 | T1976 | T1979 | amod | certain,signals |
R1715 | T1977 | T1978 | amod | cellular,danger |
R1718 | T1978 | T1979 | compound | danger,signals |
R1721 | T1979 | T1975 | pobj | signals,to |
R1725 | T1980 | T1972 | cc | and,assemble |
R1728 | T1981 | T1972 | conj | mediate,assemble |
R1734 | T1982 | T1983 | det | the,auto-activation |
R1737 | T1983 | T1981 | dobj | auto-activation,mediate |
R1741 | T1984 | T1983 | prep | of,auto-activation |
R1744 | T1985 | T1986 | amod | caspase-1,[ |
R1749 | T1986 | T1988 | nmod | [,] |
R1752 | T1987 | T1986 | nummod | 9,[ |
R1759 | T1988 | T1984 | pobj | ],of |
R1763 | T1989 | T1988 | punct | ",",] |
R1764 | T1990 | T1992 | compound | [,] |
R1765 | T1991 | T1992 | compound | 11,] |
R1766 | T1992 | T1983 | appos | ],auto-activation |
R1767 | T1993 | T1992 | punct | ",",] |
R1768 | T1994 | T1995 | nsubj | which,cleaves |
R1771 | T1995 | T1992 | relcl | cleaves,] |
R1775 | T1996 | T1995 | dobj | pro-IL-1β,cleaves |
R1778 | T1997 | T1996 | cc | and,pro-IL-1β |
R1781 | T1998 | T1996 | conj | pro-IL-18,pro-IL-1β |
R1785 | T1999 | T1995 | prep | into,cleaves |
R1789 | T2000 | T2003 | poss | their,forms |
R1793 | T2001 | T2002 | advmod | biologically,active |
R1794 | T2002 | T2003 | amod | active,forms |
R1796 | T2003 | T1999 | pobj | forms,into |
R1797 | T2004 | T2003 | prep | for,forms |
R1799 | T2005 | T2004 | pobj | secretion,for |
R1802 | T2006 | T1972 | punct | .,assemble |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1240 | 0-9 | NN | denotes | Pro-IL-1β |
T1241 | 10-12 | VB | denotes | is |
T1242 | 13-25 | RB | denotes | subsequently |
T1243 | 26-35 | VB | denotes | converted |
T1244 | 36-40 | IN | denotes | into |
T1245 | 41-44 | PRP-DOLLAR- | denotes | its |
T1246 | 45-51 | JJ | denotes | active |
T1247 | 52-56 | NN | denotes | form |
T1248 | 57-59 | IN | denotes | by |
T1249 | 60-69 | JJ | denotes | cytosolic |
T1250 | 70-77 | NN | denotes | protein |
T1251 | 78-87 | NN | denotes | complexes |
T1252 | 88-94 | VB | denotes | termed |
T1253 | 95-111 | NN | denotes | “inflammasomes.” |
T1254 | 112-125 | NN | denotes | Inflammasomes |
T1255 | 126-134 | NN | denotes | assemble |
T1256 | 135-137 | IN | denotes | in |
T1257 | 138-146 | NN | denotes | response |
T1258 | 147-149 | TO | denotes | to |
T1259 | 150-157 | JJ | denotes | certain |
T1260 | 158-166 | JJ | denotes | cellular |
T1261 | 167-173 | NN | denotes | danger |
T1262 | 174-181 | NN | denotes | signals |
T1263 | 182-185 | CC | denotes | and |
T1264 | 186-193 | VB | denotes | mediate |
T1265 | 194-197 | DT | denotes | the |
T1266 | 198-213 | NN | denotes | auto-activation |
T1267 | 214-216 | IN | denotes | of |
T1268 | 217-226 | NN | denotes | caspase-1 |
T1269 | 227-228 | -LRB- | denotes | [ |
T1270 | 228-229 | CD | denotes | 9 |
T1271 | 229-230 | -RRB- | denotes | ] |
T1272 | 230-231 | -COMMA- | denotes | , |
T1273 | 232-233 | -LRB- | denotes | [ |
T1274 | 233-235 | CD | denotes | 11 |
T1275 | 235-236 | -RRB- | denotes | ] |
T1276 | 236-237 | -COMMA- | denotes | , |
T1277 | 238-243 | WDT | denotes | which |
T1278 | 244-251 | VB | denotes | cleaves |
T1279 | 252-261 | NN | denotes | pro-IL-1β |
T1280 | 262-265 | CC | denotes | and |
T1281 | 266-275 | NN | denotes | pro-IL-18 |
T1282 | 276-280 | IN | denotes | into |
T1283 | 281-286 | PRP-DOLLAR- | denotes | their |
T1284 | 287-299 | RB | denotes | biologically |
T1285 | 300-306 | JJ | denotes | active |
T1286 | 307-312 | NN | denotes | forms |
T1287 | 313-316 | IN | denotes | for |
T1288 | 317-326 | NN | denotes | secretion |
R1029 | T1240 | T1241 | arg1Of | Pro-IL-1β,is |
R1030 | T1240 | T1243 | arg2Of | Pro-IL-1β,converted |
R1031 | T1240 | T1264 | arg1Of | Pro-IL-1β,mediate |
R1032 | T1243 | T1241 | arg2Of | converted,is |
R1033 | T1243 | T1242 | arg1Of | converted,subsequently |
R1034 | T1243 | T1244 | arg1Of | converted,into |
R1035 | T1243 | T1263 | arg1Of | converted,and |
R1036 | T1247 | T1244 | arg2Of | form,into |
R1037 | T1247 | T1245 | arg1Of | form,its |
R1038 | T1247 | T1246 | arg1Of | form,active |
R1039 | T1251 | T1243 | arg1Of | complexes,converted |
R1040 | T1251 | T1248 | arg2Of | complexes,by |
R1041 | T1251 | T1249 | arg1Of | complexes,cytosolic |
R1042 | T1251 | T1250 | arg1Of | complexes,protein |
R1043 | T1251 | T1252 | arg2Of | complexes,termed |
R1044 | T1252 | T1256 | arg1Of | termed,in |
R1045 | T1255 | T1252 | arg3Of | assemble,termed |
R1046 | T1255 | T1253 | arg1Of | assemble,“inflammasomes.” |
R1047 | T1255 | T1254 | arg1Of | assemble,Inflammasomes |
R1048 | T1257 | T1256 | arg2Of | response,in |
R1049 | T1257 | T1258 | arg1Of | response,to |
R1050 | T1262 | T1258 | arg2Of | signals,to |
R1051 | T1262 | T1259 | arg1Of | signals,certain |
R1052 | T1262 | T1260 | arg1Of | signals,cellular |
R1053 | T1262 | T1261 | arg1Of | signals,danger |
R1054 | T1264 | T1263 | arg2Of | mediate,and |
R1055 | T1266 | T1264 | arg2Of | auto-activation,mediate |
R1056 | T1266 | T1265 | arg1Of | auto-activation,the |
R1057 | T1266 | T1267 | arg1Of | auto-activation,of |
R1058 | T1266 | T1273 | arg1Of | auto-activation,[ |
R1059 | T1266 | T1276 | arg1Of | auto-activation,"," |
R1060 | T1266 | T1277 | arg1Of | auto-activation,which |
R1061 | T1266 | T1278 | arg1Of | auto-activation,cleaves |
R1062 | T1268 | T1267 | arg2Of | caspase-1,of |
R1063 | T1268 | T1269 | arg1Of | caspase-1,[ |
R1064 | T1268 | T1272 | arg1Of | caspase-1,"," |
R1065 | T1270 | T1269 | arg2Of | 9,[ |
R1066 | T1271 | T1269 | arg3Of | ],[ |
R1067 | T1274 | T1273 | arg2Of | 11,[ |
R1068 | T1275 | T1273 | arg3Of | ],[ |
R1069 | T1279 | T1280 | arg1Of | pro-IL-1β,and |
R1070 | T1280 | T1278 | arg2Of | and,cleaves |
R1071 | T1280 | T1282 | arg1Of | and,into |
R1072 | T1281 | T1280 | arg2Of | pro-IL-18,and |
R1073 | T1285 | T1284 | arg1Of | active,biologically |
R1074 | T1286 | T1282 | arg2Of | forms,into |
R1075 | T1286 | T1283 | arg1Of | forms,their |
R1076 | T1286 | T1285 | arg1Of | forms,active |
R1077 | T1286 | T1287 | arg1Of | forms,for |
R1078 | T1288 | T1287 | arg2Of | secretion,for |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T940 | 0-327 | Sentence | denotes | Pro-IL-1β is subsequently converted into its active form by cytosolic protein complexes termed “inflammasomes.” Inflammasomes assemble in response to certain cellular danger signals and mediate the auto-activation of caspase-1 [9], [11], which cleaves pro-IL-1β and pro-IL-18 into their biologically active forms for secretion. |
T30 | 0-327 | Sentence | denotes | Pro-IL-1β is subsequently converted into its active form by cytosolic protein complexes termed “inflammasomes.” Inflammasomes assemble in response to certain cellular danger signals and mediate the auto-activation of caspase-1 [9], [11], which cleaves pro-IL-1β and pro-IL-18 into their biologically active forms for secretion. |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
22649552-21350580-88306679 | 233-235 | 21350580 | denotes | 11 |
T31735 | 233-235 | 21350580 | denotes | 11 |