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PMC:3359311 / 19695-19924 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T7395 80-85 P01584 denotes IL-1β

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T5966 70-79 Positive_regulation denotes increased
T5967 80-85 Protein denotes IL-1β
T5968 86-96 Gene_expression denotes production
R5122 T5967 T5968 themeOf IL-1β,production
R5123 T5968 T5966 themeOf production,increased

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T9186 80-85 Protein denotes IL-1β
T9187 100-108 Protein denotes CF PBMCs
T9188 86-96 Gene_expression denotes production
T9189 86-96 Gene_expression denotes production
T9190 70-79 Positive_regulation denotes increased
T9191 70-79 Positive_regulation denotes increased
R8044 T9186 T9188 themeOf IL-1β,production
R8049 T9187 T9189 themeOf CF PBMCs,production
R8051 T9188 T9190 themeOf production,increased
R8052 T9189 T9191 themeOf production,increased

events-check-again

Id Subject Object Predicate Lexical cue
T9085 70-79 Positive_regulation denotes increased
T9086 80-85 Protein denotes IL-1β
T9087 86-96 Gene_expression denotes production
R8004 T9086 T9087 themeOf IL-1β,production
R8005 T9087 T9085 themeOf production,increased

GO-BP

Id Subject Object Predicate Lexical cue
T8832 112-127 http://purl.obolibrary.org/obo/GO_0032496 denotes response to LPS

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7760 0-4 DT denotes This
T7761 5-8 VBD denotes was
T7762 9-11 IN denotes in
T7763 12-20 NN denotes contrast
T7764 21-23 TO denotes to
T7765 24-25 DT denotes a
T7766 26-34 JJ denotes previous
T7767 35-40 NN denotes study
T7768 41-45 IN denotes from
T7769 46-49 PRP$ denotes our
T7770 50-55 NN denotes group
T7771 55-56 , denotes ,
T7772 57-62 WDT denotes which
T7773 63-69 VBD denotes showed
T7774 70-79 VBN denotes increased
T7775 80-85 JJ denotes IL-1β
T7776 86-96 NN denotes production
T7777 97-99 IN denotes by
T7778 100-102 NNP denotes CF
T7779 103-108 NNP denotes PBMCs
T7780 109-111 IN denotes in
T7781 112-120 NN denotes response
T7782 121-123 TO denotes to
T7783 124-127 NNP denotes LPS
T7784 128-129 NNP denotes [
T7785 129-131 CD denotes 46
T7786 131-132 NNP denotes ]
T7787 132-133 , denotes ,
T7788 134-142 IN denotes although
T7789 143-147 DT denotes this
T7790 148-158 NN denotes difference
T7791 159-162 MD denotes may
T7792 163-165 VB denotes be
T7793 166-175 VBN denotes accounted
T7794 176-179 IN denotes for
T7795 180-182 IN denotes by
T7796 183-192 JJ denotes technical
T7797 193-199 NNS denotes issues
T7798 200-202 IN denotes in
T7799 203-214 NN denotes stimulation
T7800 215-219 NN denotes time
T7801 220-223 CC denotes and
T7802 224-228 NN denotes dose
T7803 228-229 . denotes .
R6838 T7760 T7761 nsubj This,was
R6840 T7761 T7761 ROOT was,was
R6843 T7762 T7761 prep in,was
R6849 T7763 T7762 pobj contrast,in
R6853 T7764 T7763 prep to,contrast
R6855 T7765 T7767 det a,study
R6856 T7766 T7767 amod previous,study
R6857 T7767 T7764 pobj study,to
R6858 T7768 T7767 prep from,study
R6859 T7769 T7770 poss our,group
R6860 T7770 T7768 pobj group,from
R6862 T7771 T7770 punct ",",group
R6866 T7772 T7773 nsubj which,showed
R6871 T7773 T7770 relcl showed,group
R6878 T7774 T7776 amod increased,production
R6882 T7775 T7776 amod IL-1β,production
R6886 T7776 T7773 dobj production,showed
R6890 T7777 T7776 prep by,production
R6894 T7778 T7779 compound CF,PBMCs
R6895 T7779 T7777 pobj PBMCs,by
R6896 T7780 T7773 prep in,showed
R6898 T7781 T7780 pobj response,in
R6902 T7782 T7781 prep to,response
R6904 T7783 T7782 pobj LPS,to
R6905 T7784 T7786 nmod [,]
R6906 T7785 T7786 nummod 46,]
R6909 T7786 T7783 appos ],LPS
R6913 T7787 T7761 punct ",",was
R6915 T7788 T7793 mark although,accounted
R6916 T7789 T7790 det this,difference
R6919 T7790 T7793 nsubjpass difference,accounted
R6927 T7791 T7793 aux may,accounted
R6931 T7792 T7793 auxpass be,accounted
R6934 T7793 T7761 advcl accounted,was
R6939 T7794 T7793 prep for,accounted
R6942 T7795 T7793 agent by,accounted
R6946 T7796 T7797 amod technical,issues
R6951 T7797 T7795 pobj issues,by
R6954 T7798 T7793 prep in,accounted
R6958 T7799 T7800 compound stimulation,time
R6962 T7800 T7798 pobj time,in
R6966 T7801 T7800 cc and,time
R6971 T7802 T7800 conj dose,time
R6978 T7803 T7761 punct .,was

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6397 0-4 DT denotes This
T6398 5-8 VB denotes was
T6399 9-11 IN denotes in
T6400 12-20 NN denotes contrast
T6401 21-23 TO denotes to
T6402 24-25 DT denotes a
T6403 26-34 JJ denotes previous
T6404 35-40 NN denotes study
T6405 41-45 IN denotes from
T6406 46-49 PRP-DOLLAR- denotes our
T6407 50-55 NN denotes group
T6408 55-56 -COMMA- denotes ,
T6409 57-62 WDT denotes which
T6410 63-69 VB denotes showed
T6411 70-79 VB denotes increased
T6412 80-85 NN denotes IL-1β
T6413 86-96 NN denotes production
T6414 97-99 IN denotes by
T6415 100-102 NN denotes CF
T6416 103-108 NN denotes PBMCs
T6417 109-111 IN denotes in
T6418 112-120 NN denotes response
T6419 121-123 TO denotes to
T6420 124-127 NN denotes LPS
T6421 128-129 -LRB- denotes [
T6422 129-131 CD denotes 46
T6423 131-132 -RRB- denotes ]
T6424 132-133 -COMMA- denotes ,
T6425 134-142 IN denotes although
T6426 143-147 DT denotes this
T6427 148-158 NN denotes difference
T6428 159-162 MD denotes may
T6429 163-165 VB denotes be
T6430 166-175 VB denotes accounted
T6431 176-179 IN denotes for
T6432 180-182 IN denotes by
T6433 183-192 JJ denotes technical
T6434 193-199 NN denotes issues
T6435 200-202 IN denotes in
T6436 203-214 NN denotes stimulation
T6437 215-219 NN denotes time
T6438 220-223 CC denotes and
T6439 224-228 NN denotes dose
R5502 T6397 T6398 arg1Of This,was
R5503 T6397 T6399 arg1Of This,in
R5504 T6399 T6398 arg2Of in,was
R5505 T6400 T6399 arg2Of contrast,in
R5506 T6400 T6401 arg1Of contrast,to
R5507 T6404 T6401 arg2Of study,to
R5508 T6404 T6402 arg1Of study,a
R5509 T6404 T6403 arg1Of study,previous
R5510 T6404 T6405 arg1Of study,from
R5511 T6404 T6408 arg1Of study,","
R5512 T6404 T6409 arg1Of study,which
R5513 T6404 T6410 arg1Of study,showed
R5514 T6407 T6405 arg2Of group,from
R5515 T6407 T6406 arg1Of group,our
R5516 T6410 T6417 arg1Of showed,in
R5517 T6410 T6424 arg1Of showed,","
R5518 T6410 T6425 arg1Of showed,although
R5519 T6413 T6410 arg2Of production,showed
R5520 T6413 T6411 arg2Of production,increased
R5521 T6413 T6412 arg1Of production,IL-1β
R5522 T6413 T6414 arg1Of production,by
R5523 T6416 T6414 arg2Of PBMCs,by
R5524 T6416 T6415 arg1Of PBMCs,CF
R5525 T6418 T6417 arg2Of response,in
R5526 T6418 T6419 arg1Of response,to
R5527 T6420 T6419 arg2Of LPS,to
R5528 T6420 T6421 arg1Of LPS,[
R5529 T6422 T6421 arg2Of 46,[
R5530 T6423 T6421 arg3Of ],[
R5531 T6427 T6426 arg1Of difference,this
R5532 T6427 T6428 arg1Of difference,may
R5533 T6427 T6429 arg1Of difference,be
R5534 T6427 T6430 arg2Of difference,accounted
R5535 T6430 T6425 arg2Of accounted,although
R5536 T6430 T6428 arg2Of accounted,may
R5537 T6430 T6429 arg2Of accounted,be
R5538 T6430 T6431 arg1Of accounted,for
R5539 T6430 T6432 arg1Of accounted,by
R5540 T6430 T6435 arg1Of accounted,in
R5541 T6434 T6432 arg2Of issues,by
R5542 T6434 T6433 arg1Of issues,technical
R5543 T6437 T6438 arg1Of time,and
R5544 T6438 T6435 arg2Of and,in
R5545 T6438 T6436 arg1Of and,stimulation
R5546 T6439 T6438 arg2Of dose,and

sentences

Id Subject Object Predicate Lexical cue
T6046 0-229 Sentence denotes This was in contrast to a previous study from our group, which showed increased IL-1β production by CF PBMCs in response to LPS [46], although this difference may be accounted for by technical issues in stimulation time and dose.
T133 0-229 Sentence denotes This was in contrast to a previous study from our group, which showed increased IL-1β production by CF PBMCs in response to LPS [46], although this difference may be accounted for by technical issues in stimulation time and dose.

2_test

Id Subject Object Predicate Lexical cue
22649552-18490781-88306723 129-131 18490781 denotes 46
T77502 129-131 18490781 denotes 46