PMC:3359311 / 16508-16725
Annnotations
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5634 | 45-50 | P01584 | denotes | IL-1β |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T5489 | 38-44 | Regulation | denotes | alters | true |
T5490 | 45-50 | Protein | denotes | IL-1β | |
T5491 | 51-61 | Gene_expression | denotes | production | |
R4748 | T5490 | T5491 | themeOf | IL-1β,production | |
R4749 | T5491 | T5489 | themeOf | production,alters |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5829 | 21-25 | Protein | denotes | CFTR |
T5830 | 45-50 | Protein | denotes | IL-1β |
T5831 | 145-149 | Protein | denotes | CFTR |
T5832 | 26-37 | Positive_regulation | denotes | dysfunction |
T5833 | 51-61 | Gene_expression | denotes | production |
T5834 | 38-44 | Positive_regulation | denotes | alters |
R5046 | T5829 | T5832 | themeOf | CFTR,dysfunction |
R5047 | T5830 | T5833 | themeOf | IL-1β,production |
R5048 | T5832 | T5834 | causeOf | dysfunction,alters |
R5049 | T5833 | T5834 | themeOf | production,alters |
events-check-again
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T5815 | 38-44 | Regulation | denotes | alters | true |
T5816 | 45-50 | Protein | denotes | IL-1β | |
T5817 | 51-61 | Gene_expression | denotes | production | |
R5037 | T5816 | T5817 | themeOf | IL-1β,production | |
R5038 | T5817 | T5815 | themeOf | production,alters |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5787 | 69-74 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5674 | 0-2 | TO | denotes | To |
T5675 | 3-12 | VB | denotes | determine |
T5676 | 13-20 | IN | denotes | whether |
T5677 | 21-25 | NNP | denotes | CFTR |
T5678 | 26-37 | NN | denotes | dysfunction |
T5679 | 38-44 | VBZ | denotes | alters |
T5680 | 45-50 | JJ | denotes | IL-1β |
T5681 | 51-61 | NN | denotes | production |
T5682 | 61-62 | , | denotes | , |
T5683 | 63-68 | CD | denotes | THP-1 |
T5684 | 69-74 | NNS | denotes | cells |
T5685 | 75-78 | CC | denotes | and |
T5686 | 79-84 | NNS | denotes | PBMCs |
T5687 | 85-89 | IN | denotes | from |
T5688 | 90-92 | NNP | denotes | CF |
T5689 | 93-101 | NNS | denotes | patients |
T5690 | 102-105 | CC | denotes | and |
T5691 | 106-113 | JJ | denotes | healthy |
T5692 | 114-122 | NNS | denotes | controls |
T5693 | 123-127 | VBD | denotes | were |
T5694 | 128-135 | VBN | denotes | treated |
T5695 | 136-140 | IN | denotes | with |
T5696 | 141-144 | DT | denotes | the |
T5697 | 145-149 | NNP | denotes | CFTR |
T5698 | 150-159 | NN | denotes | inhibitor |
T5699 | 159-160 | , | denotes | , |
T5700 | 161-171 | NNP | denotes | CFTRinh172 |
T5701 | 171-172 | , | denotes | , |
T5702 | 173-178 | RB | denotes | prior |
T5703 | 179-181 | TO | denotes | to |
T5704 | 182-192 | NN | denotes | simulation |
T5705 | 193-197 | IN | denotes | with |
T5706 | 198-202 | JJ | denotes | live |
T5707 | 203-205 | NNP | denotes | P. |
T5708 | 206-216 | NN | denotes | aeruginosa |
T5709 | 216-217 | . | denotes | . |
R4919 | T5674 | T5675 | aux | To,determine |
R4920 | T5675 | T5694 | advcl | determine,treated |
R4921 | T5676 | T5679 | mark | whether,alters |
R4922 | T5677 | T5678 | amod | CFTR,dysfunction |
R4923 | T5678 | T5679 | nsubj | dysfunction,alters |
R4924 | T5679 | T5675 | ccomp | alters,determine |
R4925 | T5680 | T5681 | amod | IL-1β,production |
R4926 | T5681 | T5694 | nsubjpass | production,treated |
R4927 | T5682 | T5681 | punct | ",",production |
R4928 | T5683 | T5684 | nummod | THP-1,cells |
R4929 | T5684 | T5681 | conj | cells,production |
R4930 | T5685 | T5684 | cc | and,cells |
R4931 | T5686 | T5684 | conj | PBMCs,cells |
R4932 | T5687 | T5681 | prep | from,production |
R4933 | T5688 | T5689 | compound | CF,patients |
R4934 | T5689 | T5687 | pobj | patients,from |
R4935 | T5690 | T5689 | cc | and,patients |
R4936 | T5691 | T5692 | amod | healthy,controls |
R4937 | T5692 | T5689 | conj | controls,patients |
R4938 | T5693 | T5694 | auxpass | were,treated |
R4939 | T5694 | T5694 | ROOT | treated,treated |
R4940 | T5695 | T5694 | prep | with,treated |
R4941 | T5696 | T5698 | det | the,inhibitor |
R4942 | T5697 | T5698 | compound | CFTR,inhibitor |
R4943 | T5698 | T5695 | pobj | inhibitor,with |
R4944 | T5699 | T5698 | punct | ",",inhibitor |
R4945 | T5700 | T5698 | appos | CFTRinh172,inhibitor |
R4946 | T5701 | T5698 | punct | ",",inhibitor |
R4947 | T5702 | T5694 | advmod | prior,treated |
R4948 | T5703 | T5702 | prep | to,prior |
R4949 | T5704 | T5703 | pobj | simulation,to |
R4950 | T5705 | T5694 | prep | with,treated |
R4951 | T5706 | T5708 | amod | live,aeruginosa |
R4952 | T5707 | T5708 | compound | P.,aeruginosa |
R4953 | T5708 | T5705 | pobj | aeruginosa,with |
R4954 | T5709 | T5694 | punct | .,treated |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5537 | 0-2 | TO | denotes | To |
T5538 | 3-12 | VB | denotes | determine |
T5539 | 13-20 | IN | denotes | whether |
T5540 | 21-25 | NN | denotes | CFTR |
T5541 | 26-37 | NN | denotes | dysfunction |
T5542 | 38-44 | VB | denotes | alters |
T5543 | 45-50 | NN | denotes | IL-1β |
T5544 | 51-61 | NN | denotes | production |
T5545 | 61-62 | -COMMA- | denotes | , |
T5546 | 63-68 | NN | denotes | THP-1 |
T5547 | 69-74 | NN | denotes | cells |
T5548 | 75-78 | CC | denotes | and |
T5549 | 79-84 | NN | denotes | PBMCs |
T5550 | 85-89 | IN | denotes | from |
T5551 | 90-92 | NN | denotes | CF |
T5552 | 93-101 | NN | denotes | patients |
T5553 | 102-105 | CC | denotes | and |
T5554 | 106-113 | JJ | denotes | healthy |
T5555 | 114-122 | NN | denotes | controls |
T5556 | 123-127 | VB | denotes | were |
T5557 | 128-135 | VB | denotes | treated |
T5558 | 136-140 | IN | denotes | with |
T5559 | 141-144 | DT | denotes | the |
T5560 | 145-149 | NN | denotes | CFTR |
T5561 | 150-159 | NN | denotes | inhibitor |
T5562 | 159-160 | -COMMA- | denotes | , |
T5563 | 161-171 | NN | denotes | CFTRinh172 |
T5564 | 171-172 | -COMMA- | denotes | , |
T5565 | 173-178 | JJ | denotes | prior |
T5566 | 179-181 | TO | denotes | to |
T5567 | 182-192 | NN | denotes | simulation |
T5568 | 193-197 | IN | denotes | with |
T5569 | 198-202 | JJ | denotes | live |
T5570 | 203-205 | NNP | denotes | P. |
T5571 | 206-216 | NN | denotes | aeruginosa |
R4787 | T5538 | T5537 | arg1Of | determine,To |
R4788 | T5541 | T5540 | arg1Of | dysfunction,CFTR |
R4789 | T5541 | T5542 | arg1Of | dysfunction,alters |
R4790 | T5542 | T5538 | arg2Of | alters,determine |
R4791 | T5542 | T5539 | arg1Of | alters,whether |
R4792 | T5544 | T5542 | arg2Of | production,alters |
R4793 | T5544 | T5543 | arg1Of | production,IL-1β |
R4794 | T5547 | T5546 | arg1Of | cells,THP-1 |
R4795 | T5547 | T5548 | arg1Of | cells,and |
R4796 | T5548 | T5556 | arg1Of | and,were |
R4797 | T5548 | T5557 | arg2Of | and,treated |
R4798 | T5549 | T5548 | arg2Of | PBMCs,and |
R4799 | T5549 | T5550 | arg1Of | PBMCs,from |
R4800 | T5552 | T5551 | arg1Of | patients,CF |
R4801 | T5552 | T5553 | arg1Of | patients,and |
R4802 | T5553 | T5550 | arg2Of | and,from |
R4803 | T5555 | T5553 | arg2Of | controls,and |
R4804 | T5555 | T5554 | arg1Of | controls,healthy |
R4805 | T5557 | T5537 | modOf | treated,To |
R4806 | T5557 | T5545 | arg1Of | treated,"," |
R4807 | T5557 | T5556 | arg2Of | treated,were |
R4808 | T5557 | T5558 | arg1Of | treated,with |
R4809 | T5561 | T5558 | arg2Of | inhibitor,with |
R4810 | T5561 | T5559 | arg1Of | inhibitor,the |
R4811 | T5561 | T5560 | arg1Of | inhibitor,CFTR |
R4812 | T5561 | T5562 | arg1Of | inhibitor,"," |
R4813 | T5563 | T5562 | arg2Of | CFTRinh172,"," |
R4814 | T5563 | T5564 | arg1Of | CFTRinh172,"," |
R4815 | T5563 | T5565 | arg1Of | CFTRinh172,prior |
R4816 | T5565 | T5566 | arg1Of | prior,to |
R4817 | T5567 | T5566 | arg2Of | simulation,to |
R4818 | T5567 | T5568 | arg1Of | simulation,with |
R4819 | T5571 | T5568 | arg2Of | aeruginosa,with |
R4820 | T5571 | T5569 | arg1Of | aeruginosa,live |
R4821 | T5571 | T5570 | arg1Of | aeruginosa,P. |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5499 | 0-217 | Sentence | denotes | To determine whether CFTR dysfunction alters IL-1β production, THP-1 cells and PBMCs from CF patients and healthy controls were treated with the CFTR inhibitor, CFTRinh172, prior to simulation with live P. aeruginosa. |
T115 | 0-217 | Sentence | denotes | To determine whether CFTR dysfunction alters IL-1β production, THP-1 cells and PBMCs from CF patients and healthy controls were treated with the CFTR inhibitor, CFTRinh172, prior to simulation with live P. aeruginosa. |