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PMC:3359311 / 15883-16297 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T14572 68-73 P01584 denotes IL-1β

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T14651 295-299 Protein denotes PAO1

GO-CC

Id Subject Object Predicate Lexical cue
T14650 140-145 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T14573 44-54 JJ denotes Bay11-7082
T14574 55-63 NNS denotes inhibits
T14575 64-73 JJ denotes pro-IL-1β
T14576 74-84 NN denotes production
T14577 85-87 IN denotes in
T14578 88-96 NN denotes response
T14579 97-99 TO denotes to
T14580 100-102 NNP denotes P.
T14581 103-113 NN denotes aeruginosa
T14582 113-114 . denotes .
T14583 115-133 JJ denotes PMA-differentiated
T14584 134-139 NN denotes THP-1
T14585 140-145 NNS denotes cells
T14586 146-150 VBD denotes were
T14587 151-158 VBN denotes treated
T14588 159-163 IN denotes with
T14589 164-166 CD denotes 10
T14590 167-169 NNP denotes µM
T14591 170-180 NNP denotes CFTRinh172
T14592 181-183 CC denotes or
T14593 184-186 CD denotes 20
T14594 187-189 NNP denotes µM
T14595 190-200 NNP denotes Bay11-7082
T14596 201-204 CC denotes and
T14597 205-214 VBN denotes harvested
T14598 215-220 IN denotes after
T14599 221-222 -LRB- denotes (
T14600 222-223 NN denotes A
T14601 223-224 -RRB- denotes )
T14602 225-226 CD denotes 4
T14603 227-232 NNS denotes hours
T14604 233-234 -LRB- denotes (
T14605 234-235 FW denotes n
T14606 236-237 SYM denotes =
T14607 238-239 LS denotes 3
T14608 239-240 -RRB- denotes )
T14609 241-243 CC denotes or
T14610 244-245 -LRB- denotes (
T14611 245-246 NNP denotes B
T14612 246-247 -RRB- denotes )
T14613 248-251 CD denotes 0.5
T14614 251-252 , denotes ,
T14615 253-254 CD denotes 1
T14616 254-255 , denotes ,
T14617 256-259 CC denotes and
T14618 260-263 CD denotes 1.5
T14619 264-269 NNS denotes hours
T14620 270-271 -LRB- denotes (
T14621 271-272 FW denotes n
T14622 273-274 SYM denotes =
T14623 275-276 LS denotes 3
T14624 276-277 -RRB- denotes )
T14625 278-289 NN denotes stimulation
T14626 290-294 IN denotes with
T14627 295-299 NNP denotes PAO1
T14628 299-300 . denotes .
T14629 301-304 CD denotes One
T14630 305-319 NN denotes representative
T14631 320-324 NN denotes blot
T14632 325-327 VBZ denotes is
T14633 328-333 VBN denotes shown
T14634 334-338 IN denotes with
T14635 339-340 DT denotes a
T14636 341-346 NN denotes graph
T14637 347-349 IN denotes of
T14638 350-353 DT denotes the
T14639 354-362 VBN denotes averaged
T14640 363-375 NN denotes fluorescence
T14641 376-385 NN denotes intensity
T14642 386-392 NNS denotes values
T14643 393-397 IN denotes over
T14644 398-399 CD denotes 3
T14645 400-411 NNS denotes experiments
T14646 411-412 . denotes .
R12946 T14573 T14574 amod Bay11-7082,inhibits
R12947 T14574 T14574 ROOT inhibits,inhibits
R12948 T14575 T14576 compound pro-IL-1β,production
R12949 T14576 T14574 dobj production,inhibits
R12950 T14577 T14574 prep in,inhibits
R12951 T14578 T14577 pobj response,in
R12952 T14579 T14578 prep to,response
R12953 T14580 T14581 compound P.,aeruginosa
R12954 T14581 T14579 pobj aeruginosa,to
R12955 T14582 T14574 punct .,inhibits
R12956 T14583 T14585 amod PMA-differentiated,cells
R12957 T14584 T14585 compound THP-1,cells
R12958 T14585 T14587 nsubjpass cells,treated
R12959 T14586 T14587 auxpass were,treated
R12960 T14587 T14587 ROOT treated,treated
R12961 T14588 T14587 prep with,treated
R12962 T14589 T14591 nummod 10,CFTRinh172
R12963 T14590 T14591 compound µM,CFTRinh172
R12964 T14591 T14588 pobj CFTRinh172,with
R12965 T14592 T14591 cc or,CFTRinh172
R12966 T14593 T14595 nummod 20,Bay11-7082
R12967 T14594 T14595 compound µM,Bay11-7082
R12968 T14595 T14591 conj Bay11-7082,CFTRinh172
R12969 T14596 T14587 cc and,treated
R12970 T14597 T14587 conj harvested,treated
R12971 T14598 T14597 prep after,harvested
R12972 T14599 T14600 punct (,A
R12973 T14600 T14598 pobj A,after
R12974 T14601 T14600 punct ),A
R12975 T14602 T14603 nummod 4,hours
R12976 T14603 T14605 npadvmod hours,n
R12977 T14604 T14603 punct (,hours
R12978 T14605 T14597 advmod n,harvested
R12979 T14606 T14607 punct =,3
R12980 T14607 T14605 pobj 3,n
R12981 T14608 T14605 punct ),n
R12982 T14609 T14597 cc or,harvested
R12983 T14610 T14611 punct (,B
R12984 T14611 T14597 conj B,harvested
R12985 T14612 T14611 punct ),B
R12986 T14613 T14611 nummod 0.5,B
R12987 T14614 T14611 punct ",",B
R12988 T14615 T14611 nummod 1,B
R12989 T14616 T14611 punct ",",B
R12990 T14617 T14611 cc and,B
R12991 T14618 T14619 nummod 1.5,hours
R12992 T14619 T14621 npadvmod hours,n
R12993 T14620 T14619 punct (,hours
R12994 T14621 T14611 conj n,B
R12995 T14622 T14623 punct =,3
R12996 T14623 T14625 meta 3,stimulation
R12997 T14624 T14623 punct ),3
R12998 T14625 T14611 appos stimulation,B
R12999 T14626 T14625 prep with,stimulation
R13000 T14627 T14626 pobj PAO1,with
R13001 T14628 T14587 punct .,treated
R13002 T14629 T14631 nummod One,blot
R13003 T14630 T14631 compound representative,blot
R13004 T14631 T14633 nsubjpass blot,shown
R13005 T14632 T14633 auxpass is,shown
R13006 T14633 T14633 ROOT shown,shown
R13007 T14634 T14633 prep with,shown
R13008 T14635 T14636 det a,graph
R13009 T14636 T14634 pobj graph,with
R13010 T14637 T14636 prep of,graph
R13011 T14638 T14642 det the,values
R13012 T14639 T14642 amod averaged,values
R13013 T14640 T14642 compound fluorescence,values
R13014 T14641 T14642 compound intensity,values
R13015 T14642 T14637 pobj values,of
R13016 T14643 T14642 prep over,values
R13017 T14644 T14645 nummod 3,experiments
R13018 T14645 T14643 pobj experiments,over
R13019 T14646 T14633 punct .,shown

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T14505 44-54 NN denotes Bay11-7082
T14506 55-63 VB denotes inhibits
T14507 64-73 JJ denotes pro-IL-1β
T14508 74-84 NN denotes production
T14509 85-87 IN denotes in
T14510 88-96 NN denotes response
T14511 97-99 TO denotes to
T14512 100-102 NNP denotes P.
T14513 103-113 NN denotes aeruginosa
T14514 115-133 JJ denotes PMA-differentiated
T14515 134-139 NN denotes THP-1
T14516 140-145 NN denotes cells
T14517 146-150 VB denotes were
T14518 151-158 VB denotes treated
T14519 159-163 IN denotes with
T14520 164-166 CD denotes 10
T14521 167-169 NN denotes µM
T14522 170-180 NN denotes CFTRinh172
T14523 181-183 CC denotes or
T14524 184-186 CD denotes 20
T14525 187-189 NN denotes µM
T14526 190-200 NN denotes Bay11-7082
T14527 201-204 CC denotes and
T14528 205-214 VB denotes harvested
T14529 215-220 IN denotes after
T14530 221-222 -LRB- denotes (
T14531 222-223 NN denotes A
T14532 223-224 -RRB- denotes )
T14533 225-226 CD denotes 4
T14534 227-232 NN denotes hours
T14535 233-234 -LRB- denotes (
T14536 234-239 NN denotes n = 3
T14537 239-240 -RRB- denotes )
T14538 241-243 CC denotes or
T14539 244-245 -LRB- denotes (
T14540 245-246 NN denotes B
T14541 246-247 -RRB- denotes )
T14542 248-251 CD denotes 0.5
T14543 251-252 -COMMA- denotes ,
T14544 253-254 CD denotes 1
T14545 254-255 -COMMA- denotes ,
T14546 256-259 CC denotes and
T14547 260-263 CD denotes 1.5
T14548 264-269 NN denotes hours
T14549 270-271 -LRB- denotes (
T14550 271-276 NN denotes n = 3
T14551 276-277 -RRB- denotes )
T14552 278-289 NN denotes stimulation
T14553 290-294 IN denotes with
T14554 295-299 NN denotes PAO1
T14555 301-304 CD denotes One
T14556 305-319 NN denotes representative
T14557 320-324 NN denotes blot
T14558 325-327 VB denotes is
T14559 328-333 VB denotes shown
T14560 334-338 IN denotes with
T14561 339-340 DT denotes a
T14562 341-346 NN denotes graph
T14563 347-349 IN denotes of
T14564 350-353 DT denotes the
T14565 354-362 JJ denotes averaged
T14566 363-375 NN denotes fluorescence
T14567 376-385 NN denotes intensity
T14568 386-392 NN denotes values
T14569 393-397 IN denotes over
T14570 398-399 CD denotes 3
T14571 400-411 NN denotes experiments
R12879 T14505 T14506 arg1Of Bay11-7082,inhibits
R12880 T14506 T14509 arg1Of inhibits,in
R12881 T14508 T14506 arg2Of production,inhibits
R12882 T14508 T14507 arg1Of production,pro-IL-1β
R12883 T14510 T14509 arg2Of response,in
R12884 T14510 T14511 arg1Of response,to
R12885 T14513 T14511 arg2Of aeruginosa,to
R12886 T14513 T14512 arg1Of aeruginosa,P.
R12887 T14516 T14514 arg1Of cells,PMA-differentiated
R12888 T14516 T14515 arg1Of cells,THP-1
R12889 T14516 T14517 arg1Of cells,were
R12890 T14516 T14518 arg2Of cells,treated
R12891 T14516 T14528 arg2Of cells,harvested
R12892 T14518 T14519 arg1Of treated,with
R12893 T14518 T14527 arg1Of treated,and
R12894 T14520 T14521 arg1Of 10,µM
R12895 T14522 T14520 arg1Of CFTRinh172,10
R12896 T14522 T14523 arg1Of CFTRinh172,or
R12897 T14523 T14519 arg2Of or,with
R12898 T14524 T14525 arg1Of 20,µM
R12899 T14526 T14523 arg2Of Bay11-7082,or
R12900 T14526 T14524 arg1Of Bay11-7082,20
R12901 T14527 T14517 arg2Of and,were
R12902 T14528 T14527 arg2Of harvested,and
R12903 T14528 T14529 arg1Of harvested,after
R12904 T14531 T14530 arg2Of A,(
R12905 T14532 T14530 arg3Of ),(
R12906 T14534 T14530 arg1Of hours,(
R12907 T14534 T14533 arg1Of hours,4
R12908 T14534 T14535 arg1Of hours,(
R12909 T14534 T14538 arg1Of hours,or
R12910 T14536 T14535 arg2Of n = 3,(
R12911 T14537 T14535 arg3Of ),(
R12912 T14538 T14529 arg2Of or,after
R12913 T14540 T14539 arg2Of B,(
R12914 T14541 T14539 arg3Of ),(
R12915 T14542 T14543 arg1Of 0.5,","
R12916 T14543 T14539 arg1Of ",",(
R12917 T14543 T14546 arg1Of ",",and
R12918 T14544 T14543 arg2Of 1,","
R12919 T14546 T14538 arg2Of and,or
R12920 T14546 T14545 arg1Of and,","
R12921 T14548 T14547 arg1Of hours,1.5
R12922 T14548 T14549 arg1Of hours,(
R12923 T14550 T14549 arg2Of n = 3,(
R12924 T14551 T14549 arg3Of ),(
R12925 T14552 T14546 arg2Of stimulation,and
R12926 T14552 T14548 arg1Of stimulation,hours
R12927 T14552 T14553 arg1Of stimulation,with
R12928 T14554 T14553 arg2Of PAO1,with
R12929 T14557 T14555 arg1Of blot,One
R12930 T14557 T14556 arg1Of blot,representative
R12931 T14557 T14558 arg1Of blot,is
R12932 T14557 T14559 arg2Of blot,shown
R12933 T14559 T14558 arg2Of shown,is
R12934 T14559 T14560 arg1Of shown,with
R12935 T14562 T14560 arg2Of graph,with
R12936 T14562 T14561 arg1Of graph,a
R12937 T14562 T14563 arg1Of graph,of
R12938 T14562 T14569 arg1Of graph,over
R12939 T14568 T14563 arg2Of values,of
R12940 T14568 T14564 arg1Of values,the
R12941 T14568 T14565 arg1Of values,averaged
R12942 T14568 T14566 arg1Of values,fluorescence
R12943 T14568 T14567 arg1Of values,intensity
R12944 T14571 T14569 arg2Of experiments,over
R12945 T14571 T14570 arg1Of experiments,3

sentences

Id Subject Object Predicate Lexical cue
T14502 44-114 Sentence denotes Bay11-7082 inhibits pro-IL-1β production in response to P. aeruginosa.
T14503 115-300 Sentence denotes PMA-differentiated THP-1 cells were treated with 10 µM CFTRinh172 or 20 µM Bay11-7082 and harvested after (A) 4 hours (n = 3) or (B) 0.5, 1, and 1.5 hours (n = 3) stimulation with PAO1.
T14504 301-412 Sentence denotes One representative blot is shown with a graph of the averaged fluorescence intensity values over 3 experiments.
T110 0-114 Sentence denotes 10.1371/journal.pone.0037689.g007 Figure 7 Bay11-7082 inhibits pro-IL-1β production in response to P. aeruginosa.
T111 115-300 Sentence denotes PMA-differentiated THP-1 cells were treated with 10 µM CFTRinh172 or 20 µM Bay11-7082 and harvested after (A) 4 hours (n = 3) or (B) 0.5, 1, and 1.5 hours (n = 3) stimulation with PAO1.
T112 301-412 Sentence denotes One representative blot is shown with a graph of the averaged fluorescence intensity values over 3 experiments.