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PMC:3359311 / 117-651 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T364 171-189 P01584 denotes Interleukin-1 beta
T365 191-196 P01584 denotes IL-1β
T366 263-268 P01584 denotes IL-1β
T367 354-359 P01584 denotes IL-1β
T368 452-457 P01584 denotes IL-1β

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Speculation
T40 171-189 Protein denotes Interleukin-1 beta
T41 191-196 Protein denotes IL-1β
T42 230-239 Localization denotes Secretion
T43 263-268 Protein denotes IL-1β
T44 269-277 Regulation denotes involves
T45 354-359 Protein denotes IL-1β
T46 443-451 Positive_regulation denotes mediated true
T47 452-457 Protein denotes IL-1β
T48 458-468 Gene_expression denotes production
R25 T41 T40 equivalentTo IL-1β,Interleukin-1 beta
R26 T42 T44 themeOf Secretion,involves
R27 T43 T42 themeOf IL-1β,Secretion
R28 T47 T48 themeOf IL-1β,production
R29 T48 T46 themeOf production,mediated

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T802 171-189 Protein denotes Interleukin-1 beta
T803 191-196 Protein denotes IL-1β
T804 220-228 Positive_regulation denotes mediator
T805 220-228 Positive_regulation denotes mediator
T806 263-268 Protein denotes IL-1β
T807 230-239 Localization denotes Secretion
T808 354-359 Protein denotes IL-1β
R667 T802 T804 themeOf Interleukin-1 beta,mediator
R668 T803 T805 themeOf IL-1β,mediator
R669 T806 T807 themeOf IL-1β,Secretion

events-check-again

Id Subject Object Predicate Lexical cue Speculation
T770 171-189 Protein denotes Interleukin-1 beta
T771 191-196 Protein denotes IL-1β
T772 230-239 Localization denotes Secretion
T773 263-268 Protein denotes IL-1β
T774 269-277 Regulation denotes involves
T775 354-359 Protein denotes IL-1β
T776 443-451 Positive_regulation denotes mediated true
T777 452-457 Protein denotes IL-1β
T778 458-468 Gene_expression denotes production
R647 T771 T770 equivalentTo IL-1β,Interleukin-1 beta
R648 T772 T774 themeOf Secretion,involves
R649 T773 T772 themeOf IL-1β,Secretion
R650 T777 T778 themeOf IL-1β,production
R651 T778 T776 themeOf production,mediated

ICD10

Id Subject Object Predicate Lexical cue
T694 149-164 http://purl.bioontology.org/ontology/ICD10/E84 denotes cystic fibrosis
T695 149-164 http://purl.bioontology.org/ontology/ICD10/E84.9 denotes cystic fibrosis

GO-CC

Id Subject Object Predicate Lexical cue
T688 496-500 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

GO-BP

Id Subject Object Predicate Lexical cue
T680 11-23 http://purl.obolibrary.org/obo/GO_0006954 denotes Inflammation
T681 171-189 http://purl.obolibrary.org/obo/GO_0050720 denotes Interleukin-1 beta
T682 171-189 http://purl.obolibrary.org/obo/GO_0050702 denotes Interleukin-1 beta
T683 183-193 http://purl.obolibrary.org/obo/GO_0032611 denotes 1 beta (IL
T684 230-239 http://purl.obolibrary.org/obo/GO_0046903 denotes Secretion

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T386 0-10 NNP denotes Background
T387 11-23 NNP denotes Inflammation
T388 24-27 CC denotes and
T389 28-37 NN denotes infection
T390 38-41 VBP denotes are
T391 42-47 JJ denotes major
T392 48-60 NNS denotes determinants
T393 61-63 IN denotes of
T394 64-71 NN denotes disease
T395 72-80 NN denotes severity
T396 81-84 CC denotes and
T397 85-97 RB denotes consequently
T398 97-98 , denotes ,
T399 99-102 DT denotes the
T400 103-110 NN denotes quality
T401 111-113 IN denotes of
T402 114-118 NN denotes life
T403 119-122 CC denotes and
T404 123-130 NN denotes outcome
T405 131-134 IN denotes for
T406 135-143 NNS denotes patients
T407 144-148 IN denotes with
T408 149-155 JJ denotes cystic
T409 156-164 NN denotes fibrosis
T410 165-166 -LRB- denotes (
T411 166-168 NNP denotes CF
T412 168-169 -RRB- denotes )
T413 169-170 . denotes .
T414 171-184 NN denotes Interleukin-1
T415 185-189 NN denotes beta
T416 190-191 -LRB- denotes (
T417 191-196 NN denotes IL-1β
T418 196-197 -RRB- denotes )
T419 198-200 VBZ denotes is
T420 201-202 DT denotes a
T421 203-206 JJ denotes key
T422 207-219 JJ denotes inflammatory
T423 220-228 NN denotes mediator
T424 228-229 . denotes .
T425 230-239 NNP denotes Secretion
T426 240-242 IN denotes of
T427 243-255 RB denotes biologically
T428 256-262 JJ denotes active
T429 263-268 JJ denotes IL-1β
T430 269-277 VBZ denotes involves
T431 278-299 JJ denotes inflammasome-mediated
T432 300-310 NN denotes processing
T433 310-311 . denotes .
T434 312-318 NNP denotes Little
T435 319-321 VBZ denotes is
T436 322-327 VBN denotes known
T437 328-333 IN denotes about
T438 334-337 DT denotes the
T439 338-350 NN denotes contribution
T440 351-353 IN denotes of
T441 354-359 NN denotes IL-1β
T442 360-363 CC denotes and
T443 364-367 DT denotes the
T444 368-381 NNS denotes inflammasomes
T445 382-384 IN denotes in
T446 385-387 NNP denotes CF
T447 388-400 JJ denotes inflammatory
T448 401-408 NN denotes disease
T449 408-409 . denotes .
T450 410-414 DT denotes This
T451 415-420 NN denotes study
T452 421-429 VBZ denotes examines
T453 430-451 JJ denotes inflammasome-mediated
T454 452-457 JJ denotes IL-1β
T455 458-468 NN denotes production
T456 469-471 IN denotes in
T457 472-474 NNP denotes CF
T458 475-484 JJ denotes bronchial
T459 485-495 JJ denotes epithelial
T460 496-500 NN denotes cell
T461 501-506 NNS denotes lines
T462 507-510 CC denotes and
T463 511-516 JJ denotes human
T464 517-525 NNS denotes patients
T465 526-530 IN denotes with
T466 531-534 NNP denotes CF.
R324 T386 T387 compound Background,Inflammation
R326 T388 T387 cc and,Inflammation
R327 T389 T387 conj infection,Inflammation
R328 T390 T390 ROOT are,are
R329 T391 T392 amod major,determinants
R330 T392 T390 attr determinants,are
R331 T393 T392 prep of,determinants
R332 T394 T395 compound disease,severity
R333 T395 T393 pobj severity,of
R334 T396 T390 cc and,are
R335 T397 T400 advmod consequently,quality
R336 T398 T400 punct ",",quality
R337 T399 T400 det the,quality
R338 T400 T390 conj quality,are
R339 T401 T400 prep of,quality
R340 T402 T401 pobj life,of
R341 T403 T402 cc and,life
R342 T404 T400 conj outcome,quality
R343 T405 T400 prep for,quality
R344 T406 T405 pobj patients,for
R345 T407 T406 prep with,patients
R346 T408 T409 compound cystic,fibrosis
R347 T409 T407 pobj fibrosis,with
R348 T410 T411 punct (,CF
R349 T411 T409 appos CF,fibrosis
R350 T412 T400 punct ),quality
R351 T413 T390 punct .,are
R352 T414 T415 compound Interleukin-1,beta
R353 T415 T419 nsubj beta,is
R354 T416 T417 punct (,IL-1β
R355 T417 T415 appos IL-1β,beta
R356 T418 T417 punct ),IL-1β
R357 T419 T419 ROOT is,is
R358 T420 T423 det a,mediator
R359 T421 T423 amod key,mediator
R360 T422 T423 amod inflammatory,mediator
R361 T423 T419 attr mediator,is
R362 T424 T419 punct .,is
R363 T425 T430 nsubj Secretion,involves
R364 T426 T425 prep of,Secretion
R365 T427 T428 advmod biologically,active
R366 T428 T429 amod active,IL-1β
R367 T429 T426 pobj IL-1β,of
R368 T430 T430 ROOT involves,involves
R369 T431 T432 amod inflammasome-mediated,processing
R370 T432 T430 dobj processing,involves
R371 T433 T430 punct .,involves
R372 T434 T436 nsubjpass Little,known
R373 T435 T436 auxpass is,known
R374 T436 T436 ROOT known,known
R375 T437 T436 prep about,known
R376 T438 T439 det the,contribution
R377 T439 T437 pobj contribution,about
R378 T440 T439 prep of,contribution
R379 T441 T440 pobj IL-1β,of
R380 T442 T441 cc and,IL-1β
R381 T443 T444 det the,inflammasomes
R382 T444 T441 conj inflammasomes,IL-1β
R383 T445 T444 prep in,inflammasomes
R384 T446 T448 nmod CF,disease
R385 T447 T448 amod inflammatory,disease
R386 T448 T445 pobj disease,in
R387 T449 T436 punct .,known
R388 T450 T451 det This,study
R389 T451 T452 nsubj study,examines
R390 T452 T452 ROOT examines,examines
R391 T453 T455 amod inflammasome-mediated,production
R392 T454 T455 compound IL-1β,production
R393 T455 T452 dobj production,examines
R394 T456 T455 prep in,production
R395 T457 T461 nmod CF,lines
R396 T458 T461 amod bronchial,lines
R397 T459 T461 amod epithelial,lines
R398 T460 T461 compound cell,lines
R399 T461 T456 pobj lines,in
R400 T462 T461 cc and,lines
R401 T463 T464 amod human,patients
R402 T464 T461 conj patients,lines
R403 T465 T455 prep with,production

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T97 0-10 NN denotes Background
T98 11-23 NN denotes Inflammation
T99 24-27 CC denotes and
T100 28-37 NN denotes infection
T101 38-41 VB denotes are
T102 42-47 JJ denotes major
T103 48-60 NN denotes determinants
T104 61-63 IN denotes of
T105 64-71 NN denotes disease
T106 72-80 NN denotes severity
T107 81-84 CC denotes and
T108 85-97 RB denotes consequently
T109 97-98 -COMMA- denotes ,
T110 99-102 DT denotes the
T111 103-110 NN denotes quality
T112 111-113 IN denotes of
T113 114-118 NN denotes life
T114 119-122 CC denotes and
T115 123-130 NN denotes outcome
T116 131-134 IN denotes for
T117 135-143 NN denotes patients
T118 144-148 IN denotes with
T119 149-155 JJ denotes cystic
T120 156-164 NN denotes fibrosis
T121 165-166 -LRB- denotes (
T122 166-168 NN denotes CF
T123 168-169 -RRB- denotes )
T124 171-184 NN denotes Interleukin-1
T125 185-189 NN denotes beta
T126 190-191 -LRB- denotes (
T127 191-196 NN denotes IL-1β
T128 196-197 -RRB- denotes )
T129 198-200 VB denotes is
T130 201-202 DT denotes a
T131 203-206 JJ denotes key
T132 207-219 JJ denotes inflammatory
T133 220-228 NN denotes mediator
T134 230-239 NN denotes Secretion
T135 240-242 IN denotes of
T136 243-255 RB denotes biologically
T137 256-262 JJ denotes active
T138 263-268 NN denotes IL-1β
T139 269-277 VB denotes involves
T140 278-299 JJ denotes inflammasome-mediated
T141 300-310 NN denotes processing
T142 312-318 JJ denotes Little
T143 319-321 VB denotes is
T144 322-327 VB denotes known
T145 328-333 IN denotes about
T146 334-337 DT denotes the
T147 338-350 NN denotes contribution
T148 351-353 IN denotes of
T149 354-359 NN denotes IL-1β
T150 360-363 CC denotes and
T151 364-367 DT denotes the
T152 368-381 NN denotes inflammasomes
T153 382-384 IN denotes in
T154 385-387 NN denotes CF
T155 388-400 JJ denotes inflammatory
T156 401-408 NN denotes disease
T157 410-414 DT denotes This
T158 415-420 NN denotes study
T159 421-429 VB denotes examines
T160 430-451 JJ denotes inflammasome-mediated
T161 452-457 NN denotes IL-1β
T162 458-468 NN denotes production
T163 469-471 IN denotes in
T164 472-474 NN denotes CF
T165 475-484 JJ denotes bronchial
T166 485-495 JJ denotes epithelial
T167 496-500 NN denotes cell
T168 501-506 NN denotes lines
T169 507-510 CC denotes and
T170 511-516 JJ denotes human
T171 517-525 NN denotes patients
T172 526-530 IN denotes with
T173 531-533 NN denotes CF
R52 T98 T99 arg1Of Inflammation,and
R53 T99 T101 arg1Of and,are
R54 T100 T99 arg2Of infection,and
R55 T103 T101 arg2Of determinants,are
R56 T103 T102 arg1Of determinants,major
R57 T103 T104 arg1Of determinants,of
R58 T103 T108 arg1Of determinants,consequently
R59 T103 T109 arg1Of determinants,","
R60 T104 T107 arg1Of of,and
R61 T106 T104 arg2Of severity,of
R62 T106 T105 arg1Of severity,disease
R63 T108 T107 arg2Of consequently,and
R64 T111 T109 arg2Of quality,","
R65 T111 T110 arg1Of quality,the
R66 T111 T112 arg1Of quality,of
R67 T111 T116 arg1Of quality,for
R68 T113 T114 arg1Of life,and
R69 T114 T112 arg2Of and,of
R70 T115 T114 arg2Of outcome,and
R71 T117 T116 arg2Of patients,for
R72 T117 T118 arg1Of patients,with
R73 T120 T118 arg2Of fibrosis,with
R74 T120 T119 arg1Of fibrosis,cystic
R75 T120 T121 arg1Of fibrosis,(
R76 T122 T121 arg2Of CF,(
R77 T123 T121 arg3Of ),(
R78 T125 T124 arg1Of beta,Interleukin-1
R79 T125 T126 arg1Of beta,(
R80 T125 T129 arg1Of beta,is
R81 T127 T126 arg2Of IL-1β,(
R82 T128 T126 arg3Of ),(
R83 T133 T129 arg2Of mediator,is
R84 T133 T130 arg1Of mediator,a
R85 T133 T131 arg1Of mediator,key
R86 T133 T132 arg1Of mediator,inflammatory
R87 T134 T135 arg1Of Secretion,of
R88 T134 T139 arg1Of Secretion,involves
R89 T137 T136 arg1Of active,biologically
R90 T138 T135 arg2Of IL-1β,of
R91 T138 T137 arg1Of IL-1β,active
R92 T141 T139 arg2Of processing,involves
R93 T141 T140 arg1Of processing,inflammasome-mediated
R94 T142 T143 arg1Of Little,is
R95 T142 T144 arg2Of Little,known
R96 T144 T143 arg2Of known,is
R97 T144 T145 arg1Of known,about
R98 T147 T145 arg2Of contribution,about
R99 T147 T146 arg1Of contribution,the
R100 T147 T148 arg1Of contribution,of
R101 T147 T153 arg1Of contribution,in
R102 T149 T150 arg1Of IL-1β,and
R103 T150 T148 arg2Of and,of
R104 T152 T150 arg2Of inflammasomes,and
R105 T152 T151 arg1Of inflammasomes,the
R106 T156 T153 arg2Of disease,in
R107 T156 T154 arg1Of disease,CF
R108 T156 T155 arg1Of disease,inflammatory
R109 T158 T157 arg1Of study,This
R110 T158 T159 arg1Of study,examines
R111 T162 T159 arg2Of production,examines
R112 T162 T160 arg1Of production,inflammasome-mediated
R113 T162 T161 arg1Of production,IL-1β
R114 T162 T163 arg1Of production,in
R115 T168 T164 arg1Of lines,CF
R116 T168 T165 arg1Of lines,bronchial
R117 T168 T166 arg1Of lines,epithelial
R118 T168 T167 arg1Of lines,cell
R119 T168 T169 arg1Of lines,and
R120 T169 T163 arg2Of and,in
R121 T171 T169 arg2Of patients,and
R122 T171 T170 arg1Of patients,human
R123 T171 T172 arg1Of patients,with
R124 T173 T172 arg2Of CF,with

sentences

Id Subject Object Predicate Lexical cue
T73 0-10 Sentence denotes Background
T74 11-170 Sentence denotes Inflammation and infection are major determinants of disease severity and consequently, the quality of life and outcome for patients with cystic fibrosis (CF).
T75 171-229 Sentence denotes Interleukin-1 beta (IL-1β) is a key inflammatory mediator.
T76 230-311 Sentence denotes Secretion of biologically active IL-1β involves inflammasome-mediated processing.
T77 312-409 Sentence denotes Little is known about the contribution of IL-1β and the inflammasomes in CF inflammatory disease.
T78 410-534 Sentence denotes This study examines inflammasome-mediated IL-1β production in CF bronchial epithelial cell lines and human patients with CF.
T3 0-10 Sentence denotes Background
T4 11-170 Sentence denotes Inflammation and infection are major determinants of disease severity and consequently, the quality of life and outcome for patients with cystic fibrosis (CF).
T5 171-229 Sentence denotes Interleukin-1 beta (IL-1β) is a key inflammatory mediator.
T6 230-311 Sentence denotes Secretion of biologically active IL-1β involves inflammasome-mediated processing.
T7 312-409 Sentence denotes Little is known about the contribution of IL-1β and the inflammasomes in CF inflammatory disease.
T8 410-534 Sentence denotes This study examines inflammasome-mediated IL-1β production in CF bronchial epithelial cell lines and human patients with CF.