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PMC:3342329 / 9672-9858 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T17718 46-50 Protein denotes CCR5
T17727 46-50 Protein denotes CCR5
T5402 170-174 Protein denotes CCR5
T5401 46-50 Protein denotes CCR5
T5394 170-174 Protein denotes CCR5
T5393 46-50 Protein denotes CCR5

testone

Id Subject Object Predicate Lexical cue
T17706 46-50 Protein denotes CCR5
T5389 175-185 Gene_expression denotes expression
T5382 170-174 Protein denotes CCR5
T5381 46-50 Protein denotes CCR5
R3676 T5382 T5389 themeOf CCR5,expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T18102 46-50 Protein denotes CCR5
T5830 175-185 Gene_expression denotes expression
T5823 170-174 Protein denotes CCR5
T5822 46-50 Protein denotes CCR5
R4012 T5823 T5830 themeOf CCR5,expression

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T18057 46-50 Protein denotes CCR5
T5629 175-185 Gene_expression denotes expression
T5622 170-174 Protein denotes CCR5
T5621 46-50 Protein denotes CCR5
R3836 T5622 T5629 themeOf CCR5,expression

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T17795 54-58 NN denotes Mice
T17794 46-53 NN denotes CCR5−/−
T17793 43-45 IN denotes of
T17792 36-42 NN denotes Tissue
T17791 30-35 NN denotes Tumor
T17790 27-29 IN denotes in
T17789 18-26 NN denotes Activity
T17788 12-17 NN denotes NF-κB
T17787 9-11 IN denotes of
T17786 0-8 NN denotes Decrease
T5485 27-29 IN denotes in
T5484 18-26 NN denotes Activity
T5483 12-17 NN denotes NF-κB
T5482 9-11 IN denotes of
T5481 0-8 NN denotes Decrease
T5511 175-185 NN denotes expression
T5510 170-174 NN denotes CCR5
T5509 167-169 IN denotes in
T5508 163-166 CC denotes and
T5507 157-162 NN denotes cells
T5506 150-156 NN denotes cancer
T5505 141-149 NN denotes melanoma
T5504 130-140 RB denotes especially
T5503 128-129 -COMMA- denotes ,
T5502 120-128 NN denotes survival
T5501 115-119 NN denotes cell
T5500 108-114 NN denotes cancer
T5499 105-107 IN denotes in
T5498 100-104 NN denotes role
T5497 91-99 JJ denotes critical
T5496 89-90 DT denotes a
T5495 83-88 VB denotes plays
T5494 77-82 NN denotes NF-κB
T5493 74-76 IN denotes of
T5492 63-73 NN denotes activation
T5491 59-62 DT denotes The
T5490 54-58 NN denotes Mice
T5489 46-53 NN denotes CCR5−/−
T5488 43-45 IN denotes of
T5487 36-42 NN denotes Tissue
T5486 30-35 NN denotes Tumor
R3696 T5481 T5482 arg1Of Decrease,of
R3697 T5481 T5485 arg1Of Decrease,in
R3698 T5484 T5482 arg2Of Activity,of
R3699 T5484 T5483 arg1Of Activity,NF-κB
R3700 T5487 T5485 arg2Of Tissue,in
R3701 T5487 T5486 arg1Of Tissue,Tumor
R3702 T5487 T5488 arg1Of Tissue,of
R3703 T5490 T5488 arg2Of Mice,of
R3704 T5490 T5489 arg1Of Mice,CCR5−/−
R3705 T5492 T5491 arg1Of activation,The
R3706 T5492 T5493 arg1Of activation,of
R3707 T5492 T5495 arg1Of activation,plays
R3708 T5494 T5493 arg2Of NF-κB,of
R3709 T5495 T5499 arg1Of plays,in
R3710 T5495 T5509 arg1Of plays,in
R3711 T5498 T5495 arg2Of role,plays
R3712 T5498 T5496 arg1Of role,a
R3713 T5498 T5497 arg1Of role,critical
R3714 T5499 T5508 arg1Of in,and
R3715 T5502 T5500 arg1Of survival,cancer
R3716 T5502 T5501 arg1Of survival,cell
R3717 T5502 T5503 arg1Of survival,","
R3718 T5503 T5499 arg2Of ",",in
R3719 T5507 T5503 arg2Of cells,","
R3720 T5507 T5504 arg1Of cells,especially
R3721 T5507 T5505 arg1Of cells,melanoma
R3722 T5507 T5506 arg1Of cells,cancer
R3723 T5509 T5508 arg2Of in,and
R3724 T5511 T5509 arg2Of expression,in
R3725 T5511 T5510 arg1Of expression,CCR5
R12787 T17786 T17787 arg1Of Decrease,of
R12788 T17786 T17790 arg1Of Decrease,in
R12789 T17789 T17787 arg2Of Activity,of
R12790 T17789 T17788 arg1Of Activity,NF-κB
R12791 T17792 T17790 arg2Of Tissue,in
R12792 T17792 T17791 arg1Of Tissue,Tumor
R12793 T17792 T17793 arg1Of Tissue,of
R12794 T17795 T17793 arg2Of Mice,of
R12795 T17795 T17794 arg1Of Mice,CCR5−/−

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T17762 46-50 Protein denotes CCR5
T5444 170-174 Protein denotes CCR5
T5443 46-50 Protein denotes CCR5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T18070 46-50 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T5794 170-174 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T5793 46-50 http://www.uniprot.org/uniprot/P51681 denotes CCR5

UBERON-AE

Id Subject Object Predicate Lexical cue
T17741 36-42 http://purl.obolibrary.org/obo/UBERON_0000479 denotes Tissue
T5413 36-42 http://purl.obolibrary.org/obo/UBERON_0000479 denotes Tissue

GO-BP

Id Subject Object Predicate Lexical cue
T5451 63-82 http://purl.obolibrary.org/obo/GO_0051092 denotes activation of NF-κB

GO-CC

Id Subject Object Predicate Lexical cue
T5459 157-162 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T5458 115-119 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T17744 0-186 Sentence denotes Decrease of NF-κB Activity in Tumor Tissue of CCR5−/− Mice The activation of NF-κB plays a critical role in cancer cell survival, especially melanoma cancer cells and in CCR5 expression.
T5419 59-186 Sentence denotes The activation of NF-κB plays a critical role in cancer cell survival, especially melanoma cancer cells and in CCR5 expression.
T5418 0-58 Sentence denotes Decrease of NF-κB Activity in Tumor Tissue of CCR5−/− Mice
T76 0-58 Sentence denotes Decrease of NF-κB Activity in Tumor Tissue of CCR5−/− Mice
T77 59-186 Sentence denotes The activation of NF-κB plays a critical role in cancer cell survival, especially melanoma cancer cells and in CCR5 expression.

simple1

Id Subject Object Predicate Lexical cue
T17777 46-50 Protein denotes CCR5
T5474 170-174 Protein denotes CCR5
T5473 46-50 Protein denotes CCR5

DLUT931

Id Subject Object Predicate Lexical cue
T18080 46-50 Protein denotes CCR5
T5808 175-185 Gene_expression denotes expression
T5801 170-174 Protein denotes CCR5
T5800 46-50 Protein denotes CCR5
R4002 T5801 T5808 themeOf CCR5,expression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T18161 0-53 Negative_regulation denotes Decrease of NF-κB Activity in Tumor Tissue of CCR5−/−
T18152 12-17 Protein denotes NF-κB
T18147 54-58 Protein denotes Mice
T5902 0-53 Negative_regulation denotes Decrease of NF-κB Activity in Tumor Tissue of CCR5−/−
T5900 170-185 Gene_expression denotes CCR5 expression
T5899 59-82 Positive_regulation denotes The activation of NF-κB
T5896 108-129 Entity denotes cancer cell survival,
T5893 12-17 Protein denotes NF-κB
T5892 74-82 Protein denotes of NF-κB
T5887 170-174 Protein denotes CCR5
T5885 141-162 Entity denotes melanoma cancer cells
T5884 54-58 Protein denotes Mice
R4050 T5887 T5900 themeOf CCR5,CCR5 expression
R4051 T5892 T5899 themeOf of NF-κB,The activation of NF-κB
R4052 T5893 T5902 themeOf NF-κB,Decrease of NF-κB Activity in Tumor Tissue of CCR5−/−
R13082 T18152 T18161 themeOf NF-κB,Decrease of NF-κB Activity in Tumor Tissue of CCR5−/−

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T17919 185-186 . denotes .
T17918 54-58 NNS denotes Mice
T17917 52-53 NN denotes −
T17916 51-52 NN denotes /
T17915 50-51 CD denotes −
T17914 46-50 CD denotes CCR5
T17913 43-45 IN denotes of
T17912 36-42 NN denotes Tissue
T17911 30-35 NN denotes Tumor
T17910 27-29 IN denotes in
T17909 18-26 NN denotes Activity
T17908 12-17 JJ denotes NF-κB
T17907 9-11 IN denotes of
T17906 0-8 NN denotes Decrease
T5670 185-186 . denotes .
T5669 175-185 NN denotes expression
T5668 170-174 CD denotes CCR5
T5667 167-169 IN denotes in
T5666 163-166 CC denotes and
T5665 157-162 NNS denotes cells
T5664 150-156 NN denotes cancer
T5663 141-149 NN denotes melanoma
T5662 130-140 RB denotes especially
T5661 128-129 , denotes ,
T5660 120-128 NN denotes survival
T5659 115-119 NN denotes cell
T5658 108-114 NN denotes cancer
T5657 105-107 IN denotes in
T5656 100-104 NN denotes role
T5655 91-99 JJ denotes critical
T5654 89-90 DT denotes a
T5653 83-88 NNS denotes plays
T5652 77-82 JJ denotes NF-κB
T5651 74-76 IN denotes of
T5650 63-73 NN denotes activation
T5649 59-62 DT denotes The
T5648 54-58 NNP denotes Mice
T5647 52-53 CD denotes −
T5646 51-52 VBD denotes /
T5645 50-51 NNP denotes −
T5644 46-50 NNP denotes CCR5
T5643 43-45 IN denotes of
T5642 36-42 NNP denotes Tissue
T5641 30-35 NNP denotes Tumor
T5640 27-29 IN denotes in
T5639 18-26 NNP denotes Activity
T5638 12-17 NNP denotes NF-κB
T5637 9-11 IN denotes of
T5636 0-8 NN denotes Decrease
R3845 T5636 T5646 nsubj Decrease,/
R3846 T5637 T5636 prep of,Decrease
R3847 T5638 T5639 compound NF-κB,Activity
R3848 T5639 T5637 pobj Activity,of
R3849 T5640 T5639 prep in,Activity
R3850 T5641 T5642 compound Tumor,Tissue
R3851 T5642 T5640 pobj Tissue,in
R3852 T5643 T5642 prep of,Tissue
R3853 T5644 T5645 compound CCR5,−
R3854 T5645 T5643 pobj −,of
R3855 T5646 T5646 ROOT /,/
R3856 T5647 T5646 npadvmod −,/
R3857 T5648 T5648 ROOT Mice,Mice
R3858 T5649 T5650 det The,activation
R3859 T5650 T5650 ROOT activation,activation
R3860 T5651 T5650 prep of,activation
R3861 T5652 T5653 amod NF-κB,plays
R3862 T5653 T5651 pobj plays,of
R3863 T5654 T5656 det a,role
R3864 T5655 T5656 amod critical,role
R3865 T5656 T5650 conj role,activation
R3866 T5657 T5656 prep in,role
R3867 T5658 T5659 compound cancer,cell
R3868 T5659 T5660 compound cell,survival
R3869 T5660 T5657 pobj survival,in
R3870 T5661 T5657 punct ",",in
R3871 T5662 T5665 advmod especially,cells
R3872 T5663 T5665 compound melanoma,cells
R3873 T5664 T5665 compound cancer,cells
R3874 T5665 T5656 appos cells,role
R3875 T5666 T5650 cc and,activation
R3876 T5667 T5650 prep in,activation
R3877 T5668 T5669 amod CCR5,expression
R3878 T5669 T5667 pobj expression,in
R3879 T5670 T5650 punct .,activation
R12903 T17906 T17906 ROOT Decrease,Decrease
R12904 T17907 T17906 prep of,Decrease
R12905 T17908 T17909 amod NF-κB,Activity
R12906 T17909 T17907 pobj Activity,of
R12907 T17910 T17906 prep in,Decrease
R12908 T17911 T17912 compound Tumor,Tissue
R12909 T17912 T17910 pobj Tissue,in
R12910 T17913 T17912 prep of,Tissue
R12911 T17914 T17918 nummod CCR5,Mice
R12912 T17915 T17918 nummod −,Mice
R12913 T17916 T17918 compound /,Mice
R12914 T17917 T17918 compound −,Mice
R12915 T17918 T17913 pobj Mice,of
R12916 T17919 T17906 punct .,Decrease

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T18114 0-8 Negative_regulation denotes Decrease
T18113 12-17 Protein denotes NF-κB
T5839 175-185 Gene_expression denotes expression
T5838 63-73 Positive_regulation denotes activation
T5837 170-174 Protein denotes CCR5
T5836 77-82 Protein denotes NF-κB
T5835 0-8 Negative_regulation denotes Decrease
T5834 12-17 Protein denotes NF-κB
R4018 T5834 T5835 themeOf NF-κB,Decrease
R4019 T5836 T5838 themeOf NF-κB,activation
R4020 T5837 T5839 themeOf CCR5,expression
R13063 T18113 T18114 themeOf NF-κB,Decrease