PMC:3342329 / 884-1032
Annnotations
test3
{"project":"test3","denotations":[{"id":"T100","span":{"begin":20,"end":24},"obj":"Protein"},{"id":"T71","span":{"begin":20,"end":24},"obj":"Protein"}],"text":"melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas"}
testone
{"project":"testone","denotations":[{"id":"T35","span":{"begin":20,"end":24},"obj":"Protein"},{"id":"T53","span":{"begin":85,"end":92},"obj":"Phosphorylation"}],"text":"melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas"}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T627","span":{"begin":20,"end":24},"obj":"Protein"}],"text":"melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas"}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T753","span":{"begin":20,"end":24},"obj":"Protein"}],"text":"melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas"}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T422","span":{"begin":141,"end":148},"obj":"IN"},{"id":"T421","span":{"begin":139,"end":140},"obj":"-COMMA-"},{"id":"T420","span":{"begin":131,"end":139},"obj":"VB"},{"id":"T419","span":{"begin":127,"end":130},"obj":"VB"},{"id":"T418","span":{"begin":125,"end":126},"obj":"-COMMA-"},{"id":"T417","span":{"begin":122,"end":125},"obj":"NN"},{"id":"T416","span":{"begin":118,"end":121},"obj":"CC"},{"id":"T415","span":{"begin":116,"end":117},"obj":"-COMMA-"},{"id":"T414","span":{"begin":112,"end":116},"obj":"NN"},{"id":"T413","span":{"begin":104,"end":111},"obj":"VB"},{"id":"T412","span":{"begin":102,"end":103},"obj":"-COMMA-"},{"id":"T411","span":{"begin":93,"end":102},"obj":"NN"},{"id":"T410","span":{"begin":85,"end":92},"obj":"VB"},{"id":"T409","span":{"begin":82,"end":84},"obj":"IN"},{"id":"T408","span":{"begin":77,"end":81},"obj":"JJ"},{"id":"T407","span":{"begin":75,"end":76},"obj":"-COMMA-"},{"id":"T406","span":{"begin":65,"end":75},"obj":"NN"},{"id":"T405","span":{"begin":57,"end":64},"obj":"NN"},{"id":"T404","span":{"begin":47,"end":56},"obj":"JJ"},{"id":"T403","span":{"begin":40,"end":46},"obj":"NN"},{"id":"T402","span":{"begin":34,"end":39},"obj":"NN"},{"id":"T401","span":{"begin":28,"end":32},"obj":"NN"},{"id":"T400","span":{"begin":20,"end":27},"obj":"JJ"},{"id":"T399","span":{"begin":17,"end":19},"obj":"IN"},{"id":"T398","span":{"begin":9,"end":16},"obj":"NN"},{"id":"T397","span":{"begin":0,"end":8},"obj":"NN"}],"relations":[{"id":"R179","pred":"arg1Of","subj":"T398","obj":"T397"},{"id":"R180","pred":"arg1Of","subj":"T398","obj":"T399"},{"id":"R181","pred":"arg2Of","subj":"T401","obj":"T399"},{"id":"R182","pred":"arg1Of","subj":"T401","obj":"T400"},{"id":"R183","pred":"arg1Of","subj":"T406","obj":"T402"},{"id":"R184","pred":"arg1Of","subj":"T406","obj":"T403"},{"id":"R185","pred":"arg1Of","subj":"T406","obj":"T404"},{"id":"R186","pred":"arg1Of","subj":"T406","obj":"T405"},{"id":"R187","pred":"arg1Of","subj":"T406","obj":"T407"},{"id":"R188","pred":"arg1Of","subj":"T406","obj":"T409"},{"id":"R189","pred":"arg1Of","subj":"T406","obj":"T419"},{"id":"R190","pred":"arg2Of","subj":"T406","obj":"T420"},{"id":"R191","pred":"arg1Of","subj":"T409","obj":"T408"},{"id":"R192","pred":"arg2Of","subj":"T411","obj":"T410"},{"id":"R193","pred":"arg2Of","subj":"T411","obj":"T413"},{"id":"R194","pred":"arg1Of","subj":"T411","obj":"T416"},{"id":"R195","pred":"arg1Of","subj":"T413","obj":"T412"},{"id":"R196","pred":"arg3Of","subj":"T414","obj":"T413"},{"id":"R197","pred":"arg2Of","subj":"T416","obj":"T409"},{"id":"R198","pred":"arg1Of","subj":"T416","obj":"T415"},{"id":"R199","pred":"arg2Of","subj":"T417","obj":"T416"},{"id":"R200","pred":"arg1Of","subj":"T420","obj":"T418"},{"id":"R201","pred":"arg2Of","subj":"T420","obj":"T419"},{"id":"R202","pred":"arg1Of","subj":"T420","obj":"T421"},{"id":"R203","pred":"arg1Of","subj":"T420","obj":"T422"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas"}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T177","span":{"begin":20,"end":24},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T551","span":{"begin":93,"end":102},"obj":"http://www.uniprot.org/uniprot/P42574"},{"id":"T541","span":{"begin":20,"end":24},"obj":"http://www.uniprot.org/uniprot/P51681"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas"}
UBERON-AE
{"project":"UBERON-AE","denotations":[{"id":"T114","span":{"begin":9,"end":16},"obj":"http://purl.obolibrary.org/obo/UBERON_0000479"}],"text":"melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas"}
simple1
{"project":"simple1","denotations":[{"id":"T250","span":{"begin":20,"end":24},"obj":"Protein"}],"text":"melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas"}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T567","span":{"begin":20,"end":24},"obj":"Protein"}],"text":"melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas"}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T819","span":{"begin":85,"end":117},"obj":"Protein_catabolism"},{"id":"T810","span":{"begin":34,"end":39},"obj":"Protein"},{"id":"T808","span":{"begin":28,"end":32},"obj":"Protein"},{"id":"T805","span":{"begin":112,"end":116},"obj":"Protein"},{"id":"T799","span":{"begin":122,"end":125},"obj":"Protein"},{"id":"T795","span":{"begin":85,"end":117},"obj":"Protein"},{"id":"T782","span":{"begin":57,"end":64},"obj":"Protein"}],"relations":[{"id":"R421","pred":"themeOf","subj":"T795","obj":"T819"}],"text":"melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T1006","span":{"begin":141,"end":148},"obj":"IN"},{"id":"T1005","span":{"begin":139,"end":140},"obj":","},{"id":"T1004","span":{"begin":131,"end":139},"obj":"VBN"},{"id":"T1003","span":{"begin":127,"end":130},"obj":"VBD"},{"id":"T1002","span":{"begin":125,"end":126},"obj":","},{"id":"T1001","span":{"begin":122,"end":125},"obj":"NNP"},{"id":"T1000","span":{"begin":118,"end":121},"obj":"CC"},{"id":"T999","span":{"begin":116,"end":117},"obj":","},{"id":"T998","span":{"begin":112,"end":116},"obj":"NNP"},{"id":"T997","span":{"begin":104,"end":111},"obj":"JJ"},{"id":"T996","span":{"begin":102,"end":103},"obj":","},{"id":"T995","span":{"begin":93,"end":102},"obj":"JJ"},{"id":"T994","span":{"begin":85,"end":92},"obj":"JJ"},{"id":"T993","span":{"begin":82,"end":84},"obj":"IN"},{"id":"T992","span":{"begin":77,"end":81},"obj":"JJ"},{"id":"T991","span":{"begin":75,"end":76},"obj":","},{"id":"T990","span":{"begin":65,"end":75},"obj":"NN"},{"id":"T989","span":{"begin":57,"end":64},"obj":"NN"},{"id":"T988","span":{"begin":47,"end":56},"obj":"JJ"},{"id":"T987","span":{"begin":40,"end":46},"obj":"NN"},{"id":"T986","span":{"begin":34,"end":39},"obj":"JJ"},{"id":"T985","span":{"begin":32,"end":33},"obj":"."},{"id":"T984","span":{"begin":28,"end":32},"obj":"NNS"},{"id":"T983","span":{"begin":26,"end":27},"obj":"NN"},{"id":"T982","span":{"begin":25,"end":26},"obj":"NN"},{"id":"T981","span":{"begin":24,"end":25},"obj":"CD"},{"id":"T980","span":{"begin":20,"end":24},"obj":"CD"},{"id":"T979","span":{"begin":17,"end":19},"obj":"IN"},{"id":"T978","span":{"begin":9,"end":16},"obj":"NNS"},{"id":"T977","span":{"begin":0,"end":8},"obj":"VB"}],"relations":[{"id":"R582","pred":"compound","subj":"T977","obj":"T978"},{"id":"R584","pred":"prep","subj":"T979","obj":"T978"},{"id":"R585","pred":"nummod","subj":"T980","obj":"T984"},{"id":"R586","pred":"nummod","subj":"T981","obj":"T984"},{"id":"R587","pred":"amod","subj":"T982","obj":"T984"},{"id":"R588","pred":"amod","subj":"T983","obj":"T984"},{"id":"R589","pred":"pobj","subj":"T984","obj":"T979"},{"id":"R591","pred":"amod","subj":"T986","obj":"T987"},{"id":"R592","pred":"nsubjpass","subj":"T987","obj":"T1004"},{"id":"R593","pred":"amod","subj":"T988","obj":"T990"},{"id":"R594","pred":"compound","subj":"T989","obj":"T990"},{"id":"R595","pred":"appos","subj":"T990","obj":"T987"},{"id":"R596","pred":"punct","subj":"T991","obj":"T987"},{"id":"R597","pred":"amod","subj":"T992","obj":"T993"},{"id":"R598","pred":"prep","subj":"T993","obj":"T987"},{"id":"R599","pred":"nsubjpass","subj":"T994","obj":"T1004"},{"id":"R600","pred":"nsubjpass","subj":"T995","obj":"T1004"},{"id":"R601","pred":"punct","subj":"T996","obj":"T998"},{"id":"R602","pred":"compound","subj":"T997","obj":"T998"},{"id":"R603","pred":"appos","subj":"T998","obj":"T995"},{"id":"R604","pred":"punct","subj":"T999","obj":"T998"},{"id":"R605","pred":"cc","subj":"T1000","obj":"T998"},{"id":"R606","pred":"conj","subj":"T1001","obj":"T998"},{"id":"R607","pred":"punct","subj":"T1002","obj":"T1004"},{"id":"R608","pred":"auxpass","subj":"T1003","obj":"T1004"},{"id":"R609","pred":"ROOT","subj":"T1004","obj":"T1004"},{"id":"R610","pred":"punct","subj":"T1005","obj":"T1004"}],"text":"melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas"}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T678","span":{"begin":131,"end":139},"obj":"Positive_regulation"},{"id":"T677","span":{"begin":131,"end":139},"obj":"Positive_regulation"},{"id":"T676","span":{"begin":65,"end":75},"obj":"Gene_expression"},{"id":"T675","span":{"begin":65,"end":75},"obj":"Gene_expression"},{"id":"T673","span":{"begin":122,"end":125},"obj":"Protein"},{"id":"T672","span":{"begin":112,"end":116},"obj":"Protein"},{"id":"T671","span":{"begin":34,"end":39},"obj":"Protein"}],"relations":[{"id":"R364","pred":"themeOf","subj":"T671","obj":"T675"},{"id":"R365","pred":"themeOf","subj":"T673","obj":"T676"},{"id":"R367","pred":"themeOf","subj":"T675","obj":"T677"},{"id":"R368","pred":"themeOf","subj":"T676","obj":"T678"}],"text":"melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas"}