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PMC:3342329 / 761-942 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T99 98-102 Protein denotes CCR5
T100 143-147 Protein denotes CCR5
T98 38-53 Phosphorylation denotes phosphorylation
T97 24-34 Negative_regulation denotes inhibition
T96 4-11 Entity denotes nucleus
T71 143-147 Protein denotes CCR5
T70 98-102 Protein denotes CCR5
R22 T98 T97 themeOf phosphorylation,inhibition

testone

Id Subject Object Predicate Lexical cue
T35 143-147 Protein denotes CCR5
T34 98-102 Protein denotes CCR5
T52 38-53 Phosphorylation denotes phosphorylation
T51 4-11 Entity denotes nucleus

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T627 143-147 Protein denotes CCR5
T626 98-102 Protein denotes CCR5

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T753 143-147 Protein denotes CCR5
T752 98-102 Protein denotes CCR5

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T404 170-179 JJ denotes apoptotic
T403 163-169 NN denotes target
T402 157-162 NN denotes NF-κB
T401 151-155 NN denotes mice
T400 143-150 JJ denotes CCR5+/+
T399 140-142 IN denotes of
T398 132-139 NN denotes tissues
T397 123-131 NN denotes melanoma
T396 120-122 TO denotes to
T395 111-119 VB denotes compared
T394 106-110 NN denotes mice
T393 98-105 NN denotes CCR5−/−
T392 95-97 IN denotes of
T391 87-94 NN denotes tissues
T390 78-86 NN denotes melanoma
T389 74-77 DT denotes the
T388 71-73 IN denotes in
T387 65-70 VB denotes found
T386 61-64 VB denotes was
T385 57-60 NN denotes IκB
T384 54-56 IN denotes of
T383 38-53 NN denotes phosphorylation
T382 35-37 IN denotes of
T381 24-34 NN denotes inhibition
T380 20-23 DT denotes the
T379 12-19 IN denotes through
T378 4-11 NN denotes nucleus
T377 0-3 DT denotes the
R161 T378 T377 arg1Of nucleus,the
R162 T381 T379 arg2Of inhibition,through
R163 T381 T380 arg1Of inhibition,the
R164 T381 T382 arg1Of inhibition,of
R165 T383 T382 arg2Of phosphorylation,of
R166 T383 T384 arg1Of phosphorylation,of
R167 T385 T384 arg2Of IκB,of
R168 T387 T386 arg2Of found,was
R169 T387 T388 arg1Of found,in
R170 T387 T395 arg1Of found,compared
R171 T391 T388 arg2Of tissues,in
R172 T391 T389 arg1Of tissues,the
R173 T391 T390 arg1Of tissues,melanoma
R174 T391 T392 arg1Of tissues,of
R175 T394 T392 arg2Of mice,of
R176 T394 T393 arg1Of mice,CCR5−/−
R177 T396 T395 arg2Of to,compared
R178 T398 T396 arg2Of tissues,to
R179 T398 T397 arg1Of tissues,melanoma
R180 T398 T399 arg1Of tissues,of
R181 T401 T399 arg2Of mice,of
R182 T401 T400 arg1Of mice,CCR5+/+

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T177 143-147 Protein denotes CCR5
T176 98-102 Protein denotes CCR5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T541 143-147 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T540 98-102 http://www.uniprot.org/uniprot/P51681 denotes CCR5

UBERON-AE

Id Subject Object Predicate Lexical cue
T114 132-139 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues
T113 87-94 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues

GO-BP

Id Subject Object Predicate Lexical cue
T207 38-60 http://purl.obolibrary.org/obo/GO_0007252 denotes phosphorylation of IκB
T206 38-53 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T205 24-60 http://purl.obolibrary.org/obo/GO_1903720 denotes inhibition of phosphorylation of IκB
T204 24-53 http://purl.obolibrary.org/obo/GO_0042326 denotes inhibition of phosphorylation

GO-CC

Id Subject Object Predicate Lexical cue
T213 4-11 http://purl.obolibrary.org/obo/GO_0005634 denotes nucleus

simple1

Id Subject Object Predicate Lexical cue
T250 143-147 Protein denotes CCR5
T249 98-102 Protein denotes CCR5

DLUT931

Id Subject Object Predicate Lexical cue
T581 24-34 Negative_regulation denotes inhibition
T567 143-147 Protein denotes CCR5
T566 98-102 Protein denotes CCR5

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T810 157-162 Protein denotes NF-κB
T808 151-155 Protein denotes mice
T801 106-110 Protein denotes mice
T780 0-11 Entity denotes the nucleus

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T988 170-179 JJ denotes apoptotic
T987 163-169 NN denotes target
T986 157-162 JJ denotes NF-κB
T985 155-156 . denotes .
T984 151-155 NNS denotes mice
T983 149-150 NN denotes +
T982 148-149 NN denotes /
T981 147-148 CD denotes +
T980 143-147 CD denotes CCR5
T979 140-142 IN denotes of
T978 132-139 NNS denotes tissues
T977 123-131 VB denotes melanoma
T976 120-122 TO denotes to
T975 111-119 VBN denotes compared
T974 106-110 NNS denotes mice
T973 104-105 NN denotes −
T972 103-104 NN denotes /
T971 102-103 CD denotes −
T970 98-102 CD denotes CCR5
T969 95-97 IN denotes of
T968 87-94 NNS denotes tissues
T967 78-86 NN denotes melanoma
T966 74-77 DT denotes the
T965 71-73 IN denotes in
T964 65-70 VBN denotes found
T963 61-64 VBD denotes was
T962 57-60 NNP denotes IκB
T961 54-56 IN denotes of
T960 38-53 NN denotes phosphorylation
T959 35-37 IN denotes of
T958 24-34 NN denotes inhibition
T957 20-23 DT denotes the
T956 12-19 IN denotes through
T955 4-11 NN denotes nucleus
T954 0-3 DT denotes the
R559 T954 T955 det the,nucleus
R562 T957 T958 det the,inhibition
R563 T958 T956 pobj inhibition,through
R564 T959 T958 prep of,inhibition
R565 T960 T959 pobj phosphorylation,of
R566 T961 T960 prep of,phosphorylation
R567 T962 T961 pobj IκB,of
R568 T963 T964 auxpass was,found
R569 T964 T964 ROOT found,found
R570 T965 T964 prep in,found
R571 T966 T968 det the,tissues
R572 T967 T968 compound melanoma,tissues
R573 T968 T965 pobj tissues,in
R574 T969 T968 prep of,tissues
R575 T970 T974 nummod CCR5,mice
R576 T971 T974 nummod −,mice
R577 T972 T974 compound /,mice
R578 T973 T974 compound −,mice
R579 T974 T969 pobj mice,of
R580 T975 T964 prep compared,found
R581 T976 T975 prep to,compared
R582 T977 T978 compound melanoma,tissues
R583 T978 T976 pobj tissues,to
R584 T979 T978 prep of,tissues
R585 T980 T984 nummod CCR5,mice
R586 T981 T984 nummod +,mice
R587 T982 T984 amod /,mice
R588 T983 T984 amod +,mice
R589 T984 T979 pobj mice,of
R590 T985 T964 punct .,found
R591 T986 T987 amod NF-κB,target

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T671 157-162 Protein denotes NF-κB
T668 24-34 Negative_regulation denotes inhibition
T667 24-34 Negative_regulation denotes inhibition
T666 24-34 Negative_regulation denotes inhibition
T662 38-53 Phosphorylation denotes phosphorylation
T661 4-11 Entity denotes nucleus
T659 57-60 Protein denotes IκB
R355 T659 T662 themeOf IκB,phosphorylation
R359 T662 T668 themeOf phosphorylation,inhibition