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PMC:3342329 / 667-854 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T98 132-147 Phosphorylation denotes phosphorylation
T97 118-128 Negative_regulation denotes inhibition
T96 98-105 Entity denotes nucleus
T95 85-88 Protein denotes p65
T94 77-80 Protein denotes p50
T93 60-73 Localization denotes translocation
T69 85-88 Protein denotes p65
T68 77-80 Protein denotes p50
R19 T94 T93 themeOf p50,translocation
R20 T95 T93 themeOf p65,translocation
R21 T96 T93 locationOf nucleus,translocation
R22 T98 T97 themeOf phosphorylation,inhibition

testone

Id Subject Object Predicate Lexical cue
T33 85-88 Protein denotes p65
T32 77-80 Protein denotes p50
T52 132-147 Phosphorylation denotes phosphorylation
T51 98-105 Entity denotes nucleus
T50 60-73 Localization denotes translocation
T49 29-36 Binding denotes binding
T48 11-21 Negative_regulation denotes inhibition
R5 T32 T50 themeOf p50,translocation
R6 T33 T50 themeOf p65,translocation
R11 T49 T48 themeOf binding,inhibition
R12 T51 T50 locationOf nucleus,translocation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T641 60-73 Localization denotes translocation
T625 85-88 Protein denotes p65
T624 77-80 Protein denotes p50
R342 T624 T641 themeOf p50,translocation
R343 T625 T641 themeOf p65,translocation

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T767 60-73 Localization denotes translocation
T751 85-88 Protein denotes p65
T750 77-80 Protein denotes p50
R411 T750 T767 themeOf p50,translocation
R412 T751 T767 themeOf p65,translocation

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T390 172-180 NN denotes melanoma
T389 168-171 DT denotes the
T388 165-167 IN denotes in
T387 159-164 VB denotes found
T386 155-158 VB denotes was
T385 151-154 NN denotes IκB
T384 148-150 IN denotes of
T383 132-147 NN denotes phosphorylation
T382 129-131 IN denotes of
T381 118-128 NN denotes inhibition
T380 114-117 DT denotes the
T379 106-113 IN denotes through
T378 98-105 NN denotes nucleus
T377 94-97 DT denotes the
T376 89-93 IN denotes into
T375 85-88 NN denotes p65
T374 81-84 CC denotes and
T373 77-80 NN denotes p50
T372 74-76 IN denotes of
T371 60-73 NN denotes translocation
T370 56-59 CC denotes and
T369 54-55 -COMMA- denotes ,
T368 49-54 NN denotes NF-κB
T367 46-48 IN denotes of
T366 37-45 NN denotes activity
T365 29-36 NN denotes binding
T364 25-28 NN denotes DNA
T363 22-24 IN denotes of
T362 11-21 NN denotes inhibition
R143 T362 T363 arg1Of inhibition,of
R144 T362 T370 arg1Of inhibition,and
R145 T366 T363 arg2Of activity,of
R146 T366 T364 arg1Of activity,DNA
R147 T366 T365 arg1Of activity,binding
R148 T366 T367 arg1Of activity,of
R149 T368 T367 arg2Of NF-κB,of
R150 T370 T369 arg1Of and,","
R151 T370 T379 arg1Of and,through
R152 T370 T386 arg1Of and,was
R153 T370 T387 arg2Of and,found
R154 T371 T370 arg2Of translocation,and
R155 T371 T372 arg1Of translocation,of
R156 T371 T376 arg1Of translocation,into
R157 T373 T374 arg1Of p50,and
R158 T374 T372 arg2Of and,of
R159 T375 T374 arg2Of p65,and
R160 T378 T376 arg2Of nucleus,into
R161 T378 T377 arg1Of nucleus,the
R162 T381 T379 arg2Of inhibition,through
R163 T381 T380 arg1Of inhibition,the
R164 T381 T382 arg1Of inhibition,of
R165 T383 T382 arg2Of phosphorylation,of
R166 T383 T384 arg1Of phosphorylation,of
R167 T385 T384 arg2Of IκB,of
R168 T387 T386 arg2Of found,was
R169 T387 T388 arg1Of found,in

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T175 85-88 Protein denotes p65
T174 77-80 Protein denotes p50

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T550 85-88 http://www.uniprot.org/uniprot/P21579 denotes p65
T549 85-88 http://www.uniprot.org/uniprot/Q04206 denotes p65
T548 77-80 http://www.uniprot.org/uniprot/P19838 denotes p50

GO-BP

Id Subject Object Predicate Lexical cue
T207 132-154 http://purl.obolibrary.org/obo/GO_0007252 denotes phosphorylation of IκB
T206 132-147 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T205 118-154 http://purl.obolibrary.org/obo/GO_1903720 denotes inhibition of phosphorylation of IκB
T204 118-147 http://purl.obolibrary.org/obo/GO_0042326 denotes inhibition of phosphorylation
T203 11-36 http://purl.obolibrary.org/obo/GO_0039568 denotes inhibition of DNA binding
T202 11-36 http://purl.obolibrary.org/obo/GO_1904743 denotes inhibition of DNA binding
T201 11-36 http://purl.obolibrary.org/obo/GO_0043392 denotes inhibition of DNA binding

GO-MF

Id Subject Object Predicate Lexical cue
T214 25-36 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding
T215 29-36 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

GO-CC

Id Subject Object Predicate Lexical cue
T213 98-105 http://purl.obolibrary.org/obo/GO_0005634 denotes nucleus

simple1

Id Subject Object Predicate Lexical cue
T248 85-88 Protein denotes p65
T247 77-80 Protein denotes p50

DLUT931

Id Subject Object Predicate Lexical cue
T581 118-128 Negative_regulation denotes inhibition
T580 60-73 Localization denotes translocation
T565 85-88 Protein denotes p65
T564 77-80 Protein denotes p50
R318 T564 T580 themeOf p50,translocation
R319 T565 T580 themeOf p65,translocation
R324 T580 T581 themeOf translocation,inhibition
R325 T580 T581 themeOf translocation,inhibition

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T791 85-88 Protein denotes p65
T780 94-105 Entity denotes the nucleus
T777 46-54 Protein denotes of NF-κB
T775 77-80 Protein denotes p50

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T967 172-180 NN denotes melanoma
T966 168-171 DT denotes the
T965 165-167 IN denotes in
T964 159-164 VBN denotes found
T963 155-158 VBD denotes was
T962 151-154 NNP denotes IκB
T961 148-150 IN denotes of
T960 132-147 NN denotes phosphorylation
T959 129-131 IN denotes of
T958 118-128 NN denotes inhibition
T957 114-117 DT denotes the
T956 106-113 IN denotes through
T955 98-105 NN denotes nucleus
T954 94-97 DT denotes the
T953 89-93 IN denotes into
T952 85-88 CD denotes p65
T951 81-84 CC denotes and
T950 77-80 CD denotes p50
T949 74-76 IN denotes of
T948 60-73 NN denotes translocation
T947 56-59 CC denotes and
T946 54-55 , denotes ,
T945 49-54 NNP denotes NF-κB
T944 46-48 IN denotes of
T943 37-45 NN denotes activity
T942 29-36 JJ denotes binding
T941 25-28 NNP denotes DNA
T940 22-24 IN denotes of
T939 11-21 NN denotes inhibition
R544 T939 T964 nsubjpass inhibition,found
R545 T940 T939 prep of,inhibition
R546 T941 T940 pobj DNA,of
R547 T942 T943 amod binding,activity
R548 T943 T939 conj activity,inhibition
R549 T944 T943 prep of,activity
R550 T945 T944 pobj NF-κB,of
R551 T946 T943 punct ",",activity
R552 T947 T943 cc and,activity
R553 T948 T943 conj translocation,activity
R554 T949 T948 prep of,translocation
R555 T950 T949 pobj p50,of
R556 T951 T950 cc and,p50
R557 T952 T950 conj p65,p50
R558 T953 T939 prep into,inhibition
R559 T954 T955 det the,nucleus
R560 T955 T953 pobj nucleus,into
R561 T956 T939 prep through,inhibition
R562 T957 T958 det the,inhibition
R563 T958 T956 pobj inhibition,through
R564 T959 T958 prep of,inhibition
R565 T960 T959 pobj phosphorylation,of
R566 T961 T960 prep of,phosphorylation
R567 T962 T961 pobj IκB,of
R568 T963 T964 auxpass was,found
R569 T964 T964 ROOT found,found
R570 T965 T964 prep in,found

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T670 11-21 Negative_regulation denotes inhibition
T669 11-21 Negative_regulation denotes inhibition
T668 118-128 Negative_regulation denotes inhibition
T667 118-128 Negative_regulation denotes inhibition
T666 118-128 Negative_regulation denotes inhibition
T665 60-73 Localization denotes translocation
T664 60-73 Localization denotes translocation
T663 11-21 Negative_regulation denotes inhibition
T662 132-147 Phosphorylation denotes phosphorylation
T661 98-105 Entity denotes nucleus
T660 29-36 Binding denotes binding
T659 151-154 Protein denotes IκB
T658 85-88 Protein denotes p65
T657 77-80 Protein denotes p50
T656 49-54 Protein denotes NF-κB
R352 T656 T660 themeOf NF-κB,binding
R353 T657 T664 themeOf p50,translocation
R354 T658 T665 themeOf p65,translocation
R355 T659 T662 themeOf IκB,phosphorylation
R356 T660 T663 themeOf binding,inhibition
R357 T661 T664 locationOf nucleus,translocation
R358 T661 T665 locationOf nucleus,translocation
R359 T662 T668 themeOf phosphorylation,inhibition
R360 T664 T666 themeOf translocation,inhibition
R361 T664 T669 themeOf translocation,inhibition
R362 T665 T667 themeOf translocation,inhibition
R363 T665 T670 themeOf translocation,inhibition