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PMC:3342329 / 6584-6728 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T1386 88-97 Negative_regulation denotes deficient
T1385 81-87 Protein denotes IL-1Ra
T1384 68-77 Positive_regulation denotes prolonged
T1383 55-63 Positive_regulation denotes enhanced
T1382 32-35 Protein denotes p65
T1381 8-21 Localization denotes translocation
T1380 0-7 Entity denotes Nuclear
T1319 81-87 Protein denotes IL-1Ra
T1318 32-35 Protein denotes p65
R788 T1380 T1381 locationOf Nuclear,translocation
R789 T1381 T1384 themeOf translocation,prolonged
R790 T1381 T1383 themeOf translocation,enhanced
R791 T1385 T1386 themeOf IL-1Ra,deficient
R792 T1386 T1384 causeOf deficient,prolonged

testone

Id Subject Object Predicate Lexical cue
T1276 88-97 Negative_regulation denotes deficient
T1275 55-63 Positive_regulation denotes enhanced
T1274 8-21 Localization denotes translocation
T1273 0-7 Entity denotes Nuclear
T1245 81-87 Protein denotes IL-1Ra
T1244 32-35 Protein denotes p65
R759 T1245 T1276 themeOf IL-1Ra,deficient
R768 T1273 T1274 locationOf Nuclear,translocation
R769 T1274 T1275 themeOf translocation,enhanced
R770 T1276 T1275 causeOf deficient,enhanced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T2938 81-87 Protein denotes IL-1Ra
T2937 32-35 Protein denotes p65
T2964 55-63 Positive_regulation denotes enhanced
T2963 8-21 Localization denotes translocation
T2962 88-97 Negative_regulation denotes deficient
R1923 T2937 T2963 themeOf p65,translocation
R1929 T2938 T2962 themeOf IL-1Ra,deficient
R1944 T2963 T2964 themeOf translocation,enhanced

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T4226 88-97 Negative_regulation denotes deficient
T4225 55-63 Positive_regulation denotes enhanced
T4224 8-21 Localization denotes translocation
T4200 81-87 Protein denotes IL-1Ra
T4199 32-35 Protein denotes p65
R3010 T4200 T4226 themeOf IL-1Ra,deficient
R3025 T4224 T4225 themeOf translocation,enhanced
R3008 T4199 T4224 themeOf p65,translocation

2_test

Id Subject Object Predicate Lexical cue
22567084-16622035-91707034 140-142 16622035 denotes 36

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T2635 142-143 -RRB- denotes ]
T2634 140-142 CD denotes 36
T2633 139-140 -LRB- denotes [
T2632 134-138 NN denotes mice
T2631 129-133 NN denotes type
T2630 124-128 JJ denotes wild
T2629 121-123 IN denotes in
T2628 116-120 DT denotes that
T2627 113-115 TO denotes to
T2626 104-112 VB denotes compared
T2625 102-103 -COMMA- denotes ,
T2624 98-102 NN denotes mice
T2623 81-97 JJ denotes IL-1Ra-deficient
T2622 78-80 IN denotes in
T2621 68-77 VB denotes prolonged
T2620 64-67 CC denotes and
T2619 55-63 VB denotes enhanced
T2618 41-54 RB denotes significantly
T2617 37-40 VB denotes was
T2616 35-36 -RRB- denotes )
T2615 32-35 NN denotes p65
T2614 31-32 -LRB- denotes (
T2613 25-30 NN denotes NF-κB
T2612 22-24 IN denotes of
T2611 8-21 NN denotes translocation
T2610 0-7 JJ denotes Nuclear
R1665 T2611 T2610 arg1Of translocation,Nuclear
R1666 T2611 T2612 arg1Of translocation,of
R1667 T2611 T2617 arg1Of translocation,was
R1668 T2611 T2619 arg2Of translocation,enhanced
R1669 T2611 T2621 arg2Of translocation,prolonged
R1670 T2613 T2612 arg2Of NF-κB,of
R1671 T2613 T2614 arg1Of NF-κB,(
R1674 T2615 T2614 arg2Of p65,(
R1676 T2616 T2614 arg3Of ),(
R1678 T2619 T2620 arg1Of enhanced,and
R1680 T2620 T2617 arg2Of and,was
R1681 T2620 T2618 arg1Of and,significantly
R1682 T2620 T2622 arg1Of and,in
R1683 T2620 T2625 arg1Of and,","
R1684 T2620 T2626 arg1Of and,compared
R1685 T2621 T2620 arg2Of prolonged,and
R1686 T2624 T2622 arg2Of mice,in
R1687 T2624 T2623 arg1Of mice,IL-1Ra-deficient
R1689 T2627 T2626 arg2Of to,compared
R1690 T2628 T2627 arg2Of that,to
R1691 T2628 T2629 arg1Of that,in
R1693 T2632 T2629 arg2Of mice,in
R1694 T2632 T2630 arg1Of mice,wild
R1695 T2632 T2631 arg1Of mice,type
R1696 T2632 T2633 arg1Of mice,[
R1697 T2634 T2633 arg2Of 36,[
R1698 T2635 T2633 arg3Of ],[

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T1560 81-87 Protein denotes IL-1Ra
T1559 32-35 Protein denotes p65

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2757 32-35 http://www.uniprot.org/uniprot/P21579 denotes p65
T2756 32-35 http://www.uniprot.org/uniprot/Q04206 denotes p65
T2744 81-87 http://www.uniprot.org/uniprot/P18510 denotes IL-1Ra

sentences

Id Subject Object Predicate Lexical cue
T1437 0-144 Sentence denotes Nuclear translocation of NF-κB (p65) was significantly enhanced and prolonged in IL-1Ra-deficient mice, compared to that in wild type mice [36].
T46 0-144 Sentence denotes Nuclear translocation of NF-κB (p65) was significantly enhanced and prolonged in IL-1Ra-deficient mice, compared to that in wild type mice [36].

simple1

Id Subject Object Predicate Lexical cue
T1714 81-87 Protein denotes IL-1Ra
T1713 32-35 Protein denotes p65

DLUT931

Id Subject Object Predicate Lexical cue
T2829 88-97 Negative_regulation denotes deficient
T2828 55-63 Positive_regulation denotes enhanced
T2827 8-21 Localization denotes translocation
T2798 81-87 Protein denotes IL-1Ra
T2797 32-35 Protein denotes p65
R1831 T2797 T2827 themeOf p65,translocation
R1832 T2798 T2829 themeOf IL-1Ra,deficient
R1870 T2827 T2828 themeOf translocation,enhanced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4356 0-87 Positive_regulation denotes Nuclear translocation of NF-κB (p65) was significantly enhanced and prolonged in IL-1Ra
T4349 0-87 Regulation denotes Nuclear translocation of NF-κB (p65) was significantly enhanced and prolonged in IL-1Ra
T4315 22-36 Protein denotes of NF-κB (p65)
T4308 81-87 Protein denotes IL-1Ra
T4305 32-35 Protein denotes p65
T4266 98-102 Protein denotes mice
T4229 124-143 Protein denotes wild type mice [36]

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4070 143-144 . denotes .
T4069 142-143 NNP denotes ]
T4068 140-142 CD denotes 36
T4067 139-140 NNP denotes [
T4066 134-138 NNS denotes mice
T4065 129-133 NN denotes type
T4064 124-128 JJ denotes wild
T4063 121-123 IN denotes in
T4062 116-120 DT denotes that
T4061 113-115 TO denotes to
T4060 104-112 VBN denotes compared
T4059 102-103 , denotes ,
T4058 98-102 NNS denotes mice
T4057 81-97 JJ denotes IL-1Ra-deficient
T4056 78-80 IN denotes in
T4055 68-77 VBN denotes prolonged
T4054 64-67 CC denotes and
T4053 55-63 VBN denotes enhanced
T4052 41-54 RB denotes significantly
T4051 37-40 VBD denotes was
T4050 35-36 -RRB- denotes )
T4049 32-35 NNS denotes p65
T4048 31-32 -LRB- denotes (
T4047 25-30 NNP denotes NF-κB
T4046 22-24 IN denotes of
T4045 8-21 NN denotes translocation
T4044 0-7 NNP denotes Nuclear
R2880 T4044 T4045 compound Nuclear,translocation
R2881 T4045 T4053 nsubjpass translocation,enhanced
R2882 T4046 T4045 prep of,translocation
R2884 T4047 T4046 pobj NF-κB,of
R2885 T4048 T4049 punct (,p65
R2887 T4049 T4047 appos p65,NF-κB
R2888 T4050 T4049 punct ),p65
R2889 T4051 T4053 auxpass was,enhanced
R2891 T4052 T4053 advmod significantly,enhanced
R2892 T4053 T4053 ROOT enhanced,enhanced
R2893 T4054 T4053 cc and,enhanced
R2895 T4055 T4053 conj prolonged,enhanced
R2896 T4056 T4055 prep in,prolonged
R2897 T4057 T4058 amod IL-1Ra-deficient,mice
R2898 T4058 T4056 pobj mice,in
R2900 T4059 T4055 punct ",",prolonged
R2901 T4060 T4053 prep compared,enhanced
R2903 T4061 T4060 prep to,compared
R2905 T4062 T4061 pobj that,to
R2907 T4063 T4062 prep in,that
R2908 T4064 T4066 amod wild,mice
R2909 T4065 T4066 compound type,mice
R2910 T4066 T4063 pobj mice,in
R2911 T4067 T4069 nmod [,]
R2913 T4068 T4069 nummod 36,]
R2914 T4069 T4066 appos ],mice
R2915 T4070 T4053 punct .,enhanced

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T3046 88-97 Negative_regulation denotes deficient
T3045 55-63 Positive_regulation denotes enhanced
T3044 55-63 Positive_regulation denotes enhanced
T3043 8-21 Localization denotes translocation
T3042 8-21 Localization denotes translocation
T3041 0-7 Entity denotes Nuclear
T3040 81-87 Protein denotes IL-1Ra
T3039 32-35 Protein denotes p65
T3038 25-30 Protein denotes NF-κB
R1946 T3038 T3042 themeOf NF-κB,translocation
R1948 T3039 T3043 themeOf p65,translocation
R1949 T3040 T3046 themeOf IL-1Ra,deficient
R1950 T3041 T3042 locationOf Nuclear,translocation
R1951 T3041 T3043 locationOf Nuclear,translocation
R1952 T3042 T3044 themeOf translocation,enhanced
R1953 T3043 T3045 themeOf translocation,enhanced