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PMC:3342329 / 31514-31727 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T15022 211-212 -RRB- denotes )
T15021 201-211 NN denotes microscope
T15020 197-200 NN denotes DAS
T15019 196-197 -LRB- denotes (
T15018 185-195 NN denotes microscopy
T15017 172-184 NN denotes fluorescence
T15016 168-171 IN denotes for
T15015 154-167 JJ denotes cover-slipped
T15014 150-153 CC denotes and
T15013 148-149 -COMMA- denotes ,
T15012 142-148 NN denotes slides
T15011 139-141 IN denotes on
T15010 131-138 VB denotes mounted
T15009 129-130 -COMMA- denotes ,
T15008 123-129 VB denotes rinsed
T15007 118-122 VB denotes were
T15006 109-117 NN denotes sections
T15005 105-108 DT denotes the
T15004 103-104 -COMMA- denotes ,
T15003 96-103 NNP denotes Finally
T15002 90-95 NNP denotes 37°C.
T15001 87-89 IN denotes at
T15000 83-86 NN denotes min
T14999 80-82 CD denotes 15
T14998 76-79 IN denotes for
T14997 74-75 -RRB- denotes )
T14996 70-74 NN denotes DAPI
T14995 69-70 -LRB- denotes (
T14994 42-68 NN denotes 6-diamidino-2-phenylindole
T14993 41-42 -COMMA- denotes ,
T14992 39-41 NN denotes 4′
T14991 34-38 IN denotes with
T14990 24-33 VB denotes incubated
T14989 19-23 VB denotes were
T14988 10-18 NN denotes sections
T14987 6-9 DT denotes the
T14986 4-5 -COMMA- denotes ,
T14985 0-4 RB denotes Next
R10522 T14988 T14987 arg1Of sections,the
R10523 T14988 T14989 arg1Of sections,were
R10524 T14988 T14990 arg2Of sections,incubated
R10525 T14988 T15010 arg2Of sections,mounted
R10526 T14988 T15015 arg1Of sections,cover-slipped
R10527 T14990 T14989 arg2Of incubated,were
R10528 T14990 T14991 arg1Of incubated,with
R10529 T14990 T14993 arg1Of incubated,","
R10530 T14992 T14991 arg2Of 4′,with
R10531 T14993 T14985 arg1Of ",",Next
R10532 T14993 T14986 arg1Of ",",","
R10533 T14993 T15010 modOf ",",mounted
R10534 T14993 T15015 modOf ",",cover-slipped
R10535 T14994 T14995 arg1Of 6-diamidino-2-phenylindole,(
R10536 T14994 T14998 arg1Of 6-diamidino-2-phenylindole,for
R10537 T14994 T15001 arg1Of 6-diamidino-2-phenylindole,at
R10538 T14994 T15007 arg1Of 6-diamidino-2-phenylindole,were
R10539 T14994 T15008 arg2Of 6-diamidino-2-phenylindole,rinsed
R10540 T14996 T14995 arg2Of DAPI,(
R10541 T14997 T14995 arg3Of ),(
R10542 T15000 T14998 arg2Of min,for
R10543 T15000 T14999 arg1Of min,15
R10544 T15003 T15001 arg2Of Finally,at
R10545 T15003 T15002 arg1Of Finally,37°C.
R10546 T15003 T15004 arg1Of Finally,","
R10547 T15006 T15004 arg2Of sections,","
R10548 T15006 T15005 arg1Of sections,the
R10549 T15008 T14993 arg2Of rinsed,","
R10550 T15008 T15007 arg2Of rinsed,were
R10551 T15008 T15009 arg1Of rinsed,","
R10552 T15010 T15011 arg1Of mounted,on
R10553 T15010 T15014 arg1Of mounted,and
R10554 T15012 T15011 arg2Of slides,on
R10555 T15014 T15013 arg1Of and,","
R10556 T15015 T15014 arg2Of cover-slipped,and
R10557 T15015 T15016 arg1Of cover-slipped,for
R10558 T15018 T15016 arg2Of microscopy,for
R10559 T15018 T15017 arg1Of microscopy,fluorescence
R10560 T15018 T15019 arg1Of microscopy,(
R10561 T15021 T15019 arg2Of microscope,(
R10562 T15021 T15020 arg1Of microscope,DAS
R10563 T15022 T15019 arg3Of ),(

sentences

Id Subject Object Predicate Lexical cue
T14671 0-213 Sentence denotes Next, the sections were incubated with 4′,6-diamidino-2-phenylindole (DAPI) for 15 min at 37°C. Finally, the sections were rinsed, mounted on slides, and cover-slipped for fluorescence microscopy (DAS microscope).
T237 0-95 Sentence denotes Next, the sections were incubated with 4′,6-diamidino-2-phenylindole (DAPI) for 15 min at 37°C.
T238 96-213 Sentence denotes Finally, the sections were rinsed, mounted on slides, and cover-slipped for fluorescence microscopy (DAS microscope).

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T15402 54-75 Entity denotes 2-phenylindole (DAPI)
T15392 70-74 Entity denotes DAPI
T15388 197-200 Entity denotes DAS

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T15351 80-82 CD denotes 15
T15377 212-213 . denotes .
T15376 211-212 -RRB- denotes )
T15375 201-211 NN denotes microscope
T15374 197-200 NNP denotes DAS
T15373 196-197 -LRB- denotes (
T15372 185-195 NN denotes microscopy
T15371 172-184 NN denotes fluorescence
T15370 168-171 IN denotes for
T15369 154-167 JJ denotes cover-slipped
T15368 150-153 CC denotes and
T15367 148-149 , denotes ,
T15366 142-148 NNS denotes slides
T15365 139-141 IN denotes on
T15364 131-138 VBN denotes mounted
T15363 129-130 , denotes ,
T15362 123-129 VBN denotes rinsed
T15361 118-122 VBD denotes were
T15360 109-117 NNS denotes sections
T15359 105-108 DT denotes the
T15358 103-104 , denotes ,
T15357 96-103 RB denotes Finally
T15356 93-95 NNP denotes C.
T15355 92-93 CD denotes °
T15354 90-92 CD denotes 37
T15353 87-89 IN denotes at
T15352 83-86 NN denotes min
T15350 76-79 IN denotes for
T15349 74-75 -RRB- denotes )
T15348 70-74 NNP denotes DAPI
T15347 69-70 -LRB- denotes (
T15346 44-68 NN denotes diamidino-2-phenylindole
T15345 43-44 : denotes -
T15344 41-43 SYM denotes ,6
T15343 40-41 CD denotes ′
T15342 39-40 CD denotes 4
T15341 34-38 IN denotes with
T15340 24-33 VBN denotes incubated
T15339 19-23 VBD denotes were
T15338 10-18 NNS denotes sections
T15337 6-9 DT denotes the
T15336 4-5 , denotes ,
T15335 0-4 JJ denotes Next
R10870 T15335 T15340 advmod Next,incubated
R10871 T15336 T15340 punct ",",incubated
R10872 T15337 T15338 det the,sections
R10873 T15338 T15340 nsubjpass sections,incubated
R10874 T15339 T15340 auxpass were,incubated
R10875 T15340 T15340 ROOT incubated,incubated
R10876 T15341 T15340 prep with,incubated
R10877 T15342 T15343 nummod 4,′
R10878 T15343 T15341 pobj ′,with
R10879 T15344 T15346 punct ",6",diamidino-2-phenylindole
R10880 T15345 T15346 punct -,diamidino-2-phenylindole
R10881 T15346 T15346 ROOT diamidino-2-phenylindole,diamidino-2-phenylindole
R10882 T15347 T15348 punct (,DAPI
R10883 T15348 T15346 appos DAPI,diamidino-2-phenylindole
R10884 T15349 T15346 punct ),diamidino-2-phenylindole
R10885 T15350 T15346 prep for,diamidino-2-phenylindole
R10886 T15351 T15352 nummod 15,min
R10887 T15352 T15350 pobj min,for
R10888 T15353 T15346 prep at,diamidino-2-phenylindole
R10889 T15354 T15355 nummod 37,°
R10890 T15355 T15353 pobj °,at
R10891 T15356 T15353 pobj C.,at
R10892 T15357 T15362 advmod Finally,rinsed
R10893 T15358 T15362 punct ",",rinsed
R10894 T15359 T15360 det the,sections
R10895 T15360 T15362 nsubjpass sections,rinsed
R10896 T15361 T15362 auxpass were,rinsed
R10897 T15362 T15362 ROOT rinsed,rinsed
R10898 T15363 T15362 punct ",",rinsed
R10899 T15364 T15362 conj mounted,rinsed
R10900 T15365 T15364 prep on,mounted
R10901 T15366 T15365 pobj slides,on
R10902 T15367 T15365 punct ",",on
R10903 T15368 T15364 cc and,mounted
R10904 T15369 T15364 conj cover-slipped,mounted
R10905 T15370 T15369 prep for,cover-slipped
R10906 T15371 T15372 compound fluorescence,microscopy
R10907 T15372 T15370 pobj microscopy,for
R10908 T15373 T15375 punct (,microscope
R10909 T15374 T15375 compound DAS,microscope
R10910 T15375 T15372 appos microscope,microscopy
R10911 T15376 T15372 punct ),microscopy
R10912 T15377 T15362 punct .,rinsed