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PMC:3342329 / 30306-30565 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T14813 247-258 NN denotes temperature
T14812 242-246 NN denotes room
T14811 239-241 IN denotes at
T14810 237-238 NN denotes h
T14809 235-236 CD denotes 4
T14808 231-234 IN denotes for
T14807 225-230 NN denotes serum
T14806 216-224 VB denotes blocking
T14805 213-215 IN denotes in
T14804 202-212 NN denotes antibodies
T14803 191-201 JJ denotes monoclonal
T14802 189-190 -RRB- denotes )
T14801 181-189 NN denotes dilution
T14800 175-180 CD denotes 1∶200
T14799 173-174 -COMMA- denotes ,
T14798 169-173 NN denotes PCNA
T14797 168-169 -LRB- denotes (
T14796 160-167 NN denotes antigen
T14795 152-159 JJ denotes nuclear
T14794 147-151 NN denotes cell
T14793 133-146 VB denotes proliferating
T14792 122-132 JJ denotes anti-mouse
T14791 116-121 NN denotes mouse
T14790 108-115 JJ denotes primary
T14789 103-107 IN denotes with
T14788 93-102 VB denotes incubated
T14787 89-92 CC denotes and
T14786 87-88 -COMMA- denotes ,
T14785 80-87 VB denotes blotted
T14784 78-79 -COMMA- denotes ,
T14783 75-78 NNP denotes PBS
T14782 72-74 IN denotes in
T14781 64-71 VB denotes diluted
T14780 58-63 NN denotes serum
T14779 52-57 NN denotes horse
T14778 45-51 JJ denotes normal
T14777 43-44 NN denotes %
T14776 42-43 CD denotes 3
T14775 37-41 IN denotes with
T14774 33-36 NN denotes min
T14773 30-32 CD denotes 30
T14772 26-29 IN denotes for
T14771 18-25 VB denotes blocked
T14770 13-17 VB denotes were
T14769 4-12 NN denotes sections
T14768 0-3 DT denotes The
R10299 T14769 T14768 arg1Of sections,The
R10300 T14769 T14770 arg1Of sections,were
R10301 T14769 T14771 arg2Of sections,blocked
R10302 T14769 T14788 arg2Of sections,incubated
R10303 T14771 T14772 arg1Of blocked,for
R10304 T14771 T14787 arg1Of blocked,and
R10305 T14774 T14772 arg2Of min,for
R10306 T14774 T14773 arg1Of min,30
R10307 T14774 T14775 arg1Of min,with
R10308 T14776 T14777 arg1Of 3,%
R10309 T14780 T14775 arg2Of serum,with
R10310 T14780 T14776 arg1Of serum,3
R10311 T14780 T14778 arg1Of serum,normal
R10312 T14780 T14779 arg1Of serum,horse
R10313 T14780 T14781 arg2Of serum,diluted
R10314 T14781 T14782 arg1Of diluted,in
R10315 T14783 T14782 arg2Of PBS,in
R10316 T14783 T14784 arg1Of PBS,","
R10317 T14783 T14785 arg2Of PBS,blotted
R10318 T14787 T14770 arg2Of and,were
R10319 T14787 T14786 arg1Of and,","
R10320 T14788 T14787 arg2Of incubated,and
R10321 T14788 T14789 arg1Of incubated,with
R10322 T14791 T14792 arg2Of mouse,anti-mouse
R10323 T14796 T14792 arg3Of antigen,anti-mouse
R10324 T14796 T14793 arg1Of antigen,proliferating
R10325 T14796 T14794 arg1Of antigen,cell
R10326 T14796 T14795 arg1Of antigen,nuclear
R10327 T14796 T14797 arg1Of antigen,(
R10328 T14798 T14797 arg2Of PCNA,(
R10329 T14798 T14799 arg1Of PCNA,","
R10330 T14801 T14799 arg2Of dilution,","
R10331 T14801 T14800 arg1Of dilution,1∶200
R10332 T14802 T14797 arg3Of ),(
R10333 T14804 T14789 arg2Of antibodies,with
R10334 T14804 T14790 arg1Of antibodies,primary
R10335 T14804 T14791 arg1Of antibodies,mouse
R10336 T14804 T14803 arg1Of antibodies,monoclonal
R10337 T14804 T14805 arg1Of antibodies,in
R10338 T14806 T14805 arg2Of blocking,in
R10339 T14806 T14808 arg1Of blocking,for
R10340 T14806 T14811 arg1Of blocking,at
R10341 T14807 T14806 arg2Of serum,blocking
R10342 T14810 T14808 arg2Of h,for
R10343 T14810 T14809 arg1Of h,4
R10344 T14813 T14811 arg2Of temperature,at
R10345 T14813 T14812 arg1Of temperature,room

UBERON-AE

Id Subject Object Predicate Lexical cue
T14658 225-230 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum
T14657 58-63 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum

GO-MF

Id Subject Object Predicate Lexical cue
T14689 202-212 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies

GO-CC

Id Subject Object Predicate Lexical cue
T14684 202-212 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies
T14681 202-212 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies
T14679 147-151 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T14665 0-259 Sentence denotes The sections were blocked for 30 min with 3% normal horse serum diluted in PBS, blotted, and incubated with primary mouse anti-mouse proliferating cell nuclear antigen (PCNA, 1∶200 dilution) monoclonal antibodies in blocking serum for 4 h at room temperature.
T231 0-259 Sentence denotes The sections were blocked for 30 min with 3% normal horse serum diluted in PBS, blotted, and incubated with primary mouse anti-mouse proliferating cell nuclear antigen (PCNA, 1∶200 dilution) monoclonal antibodies in blocking serum for 4 h at room temperature.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T15408 181-189 Entity denotes dilution
T15406 152-174 Protein denotes nuclear antigen (PCNA,
T15405 191-212 Protein denotes monoclonal antibodies
T15400 235-238 Entity denotes 4 h
T15385 147-180 Entity denotes cell nuclear antigen (PCNA, 1∶200
T15382 169-173 Protein denotes PCNA

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T15117 52-57 NN denotes horse
T15116 45-51 JJ denotes normal
T15115 43-44 NN denotes %
T15114 42-43 CD denotes 3
T15113 37-41 IN denotes with
T15112 33-36 NN denotes min
T15111 30-32 CD denotes 30
T15110 26-29 IN denotes for
T15109 18-25 VBN denotes blocked
T15108 13-17 VBD denotes were
T15107 4-12 NNS denotes sections
T15106 0-3 DT denotes The
T15154 258-259 . denotes .
T15153 247-258 NN denotes temperature
T15152 242-246 NN denotes room
T15151 239-241 IN denotes at
T15150 237-238 NN denotes h
T15149 235-236 CD denotes 4
T15148 231-234 IN denotes for
T15147 225-230 NN denotes serum
T15146 216-224 VBG denotes blocking
T15145 213-215 IN denotes in
T15144 202-212 NNS denotes antibodies
T15143 191-201 JJ denotes monoclonal
T15142 189-190 -RRB- denotes )
T15141 181-189 NN denotes dilution
T15140 177-180 CD denotes 200
T15139 176-177 CD denotes ∶
T15138 175-176 CD denotes 1
T15137 173-174 , denotes ,
T15136 169-173 NNP denotes PCNA
T15135 168-169 -LRB- denotes (
T15134 160-167 NN denotes antigen
T15133 152-159 JJ denotes nuclear
T15132 147-151 NN denotes cell
T15131 133-146 VBG denotes proliferating
T15130 122-132 JJ denotes anti-mouse
T15129 116-121 NN denotes mouse
T15128 108-115 JJ denotes primary
T15127 103-107 IN denotes with
T15125 89-92 CC denotes and
T15124 87-88 , denotes ,
T15123 80-87 VBD denotes blotted
T15122 78-79 , denotes ,
T15121 75-78 NNP denotes PBS
T15120 72-74 IN denotes in
T15119 64-71 VBN denotes diluted
T15118 58-63 NN denotes serum
T15126 93-102 VBN denotes incubated
R10641 T15106 T15107 det The,sections
R10642 T15107 T15109 nsubjpass sections,blocked
R10643 T15108 T15109 auxpass were,blocked
R10644 T15109 T15109 ROOT blocked,blocked
R10645 T15110 T15109 prep for,blocked
R10646 T15111 T15112 nummod 30,min
R10647 T15112 T15110 pobj min,for
R10648 T15113 T15112 prep with,min
R10649 T15114 T15115 nummod 3,%
R10650 T15115 T15123 compound %,blotted
R10651 T15116 T15118 amod normal,serum
R10652 T15117 T15118 compound horse,serum
R10653 T15118 T15123 nsubj serum,blotted
R10654 T15119 T15118 acl diluted,serum
R10655 T15120 T15119 prep in,diluted
R10656 T15121 T15120 pobj PBS,in
R10657 T15122 T15118 punct ",",serum
R10658 T15123 T15109 advcl blotted,blocked
R10659 T15124 T15123 punct ",",blotted
R10660 T15125 T15123 cc and,blotted
R10661 T15126 T15123 conj incubated,blotted
R10662 T15127 T15126 prep with,incubated
R10663 T15128 T15129 amod primary,mouse
R10664 T15129 T15134 nmod mouse,antigen
R10665 T15130 T15134 amod anti-mouse,antigen
R10666 T15131 T15134 amod proliferating,antigen
R10667 T15132 T15134 compound cell,antigen
R10668 T15133 T15134 amod nuclear,antigen
R10669 T15134 T15127 pobj antigen,with
R10670 T15135 T15134 punct (,antigen
R10671 T15136 T15134 appos PCNA,antigen
R10672 T15137 T15136 punct ",",PCNA
R10673 T15138 T15140 nummod 1,200
R10674 T15139 T15140 nummod ∶,200
R10675 T15140 T15141 npadvmod 200,dilution
R10676 T15141 T15136 appos dilution,PCNA
R10677 T15142 T15136 punct ),PCNA
R10678 T15143 T15144 amod monoclonal,antibodies
R10679 T15144 T15134 appos antibodies,antigen
R10680 T15145 T15126 prep in,incubated
R10681 T15146 T15145 pcomp blocking,in
R10682 T15147 T15146 dobj serum,blocking
R10683 T15148 T15146 prep for,blocking
R10684 T15149 T15150 nummod 4,h
R10685 T15150 T15148 pobj h,for
R10686 T15151 T15150 prep at,h
R10687 T15152 T15153 compound room,temperature
R10688 T15153 T15151 pobj temperature,at
R10689 T15154 T15109 punct .,blocked