PMC:3342329 / 29851-31727
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14927 | 1366-1375 | NN | denotes | detection |
T14926 | 1362-1365 | DT | denotes | the |
T14925 | 1358-1361 | IN | denotes | For |
T14924 | 1348-1356 | NN | denotes | antibody |
T14923 | 1340-1347 | JJ | denotes | primary |
T14922 | 1336-1339 | DT | denotes | the |
T14921 | 1327-1335 | VB | denotes | omitting |
T14920 | 1324-1326 | IN | denotes | by |
T14919 | 1312-1323 | NN | denotes | experiments |
T14918 | 1308-1311 | DT | denotes | all |
T14917 | 1305-1307 | IN | denotes | in |
T14916 | 1296-1304 | VB | denotes | included |
T14915 | 1292-1295 | VB | denotes | was |
T14914 | 1284-1291 | NN | denotes | control |
T14913 | 1275-1283 | JJ | denotes | negative |
T14912 | 1273-1274 | DT | denotes | A |
T14911 | 1270-1271 | -RRB- | denotes | ) |
T14910 | 1265-1270 | NNP | denotes | Japan |
T14909 | 1263-1264 | -COMMA- | denotes | , |
T14908 | 1258-1263 | NNP | denotes | Tokyo |
T14907 | 1256-1257 | -COMMA- | denotes | , |
T14906 | 1249-1256 | NNP | denotes | Olympus |
T14905 | 1247-1248 | -COLON- | denotes | ; |
T14904 | 1230-1247 | NN | denotes | magnification×200 |
T14903 | 1229-1230 | -LRB- | denotes | ( |
T14902 | 1218-1228 | NN | denotes | microscope |
T14901 | 1212-1217 | JJ | denotes | light |
T14900 | 1210-1211 | DT | denotes | a |
T14899 | 1204-1209 | IN | denotes | under |
T14898 | 1193-1203 | NN | denotes | evaluation |
T14897 | 1189-1192 | CC | denotes | and |
T14896 | 1187-1188 | -COMMA- | denotes | , |
T14895 | 1177-1187 | JJ | denotes | aqua-mount |
T14894 | 1174-1176 | IN | denotes | in |
T14893 | 1165-1173 | VB | denotes | mounting |
T14892 | 1163-1164 | -COMMA- | denotes | , |
T14891 | 1152-1163 | NN | denotes | hematoxylin |
T14890 | 1147-1151 | IN | denotes | with |
T14889 | 1131-1146 | VB | denotes | counterstaining |
T14888 | 1128-1130 | IN | denotes | by |
T14887 | 1119-1127 | VB | denotes | followed |
T14886 | 1117-1118 | -COMMA- | denotes | , |
T14885 | 1109-1117 | NN | denotes | peroxide |
T14884 | 1105-1108 | CC | denotes | and |
T14883 | 1103-1104 | -RRB- | denotes | ) |
T14882 | 1100-1103 | NN | denotes | DAB |
T14881 | 1099-1100 | -LRB- | denotes | ( |
T14880 | 1082-1098 | NN | denotes | diaminobenzidine |
T14879 | 1077-1081 | IN | denotes | with |
T14878 | 1067-1076 | VB | denotes | developed |
T14877 | 1063-1066 | VB | denotes | was |
T14876 | 1054-1062 | NN | denotes | reaction |
T14875 | 1043-1053 | NN | denotes | peroxidase |
T14874 | 1039-1042 | DT | denotes | the |
T14873 | 1035-1038 | CC | denotes | and |
T14872 | 1028-1034 | VB | denotes | washed |
T14871 | 1023-1027 | VB | denotes | were |
T14870 | 1016-1022 | NN | denotes | slides |
T14869 | 1012-1015 | DT | denotes | The |
T14868 | 1009-1010 | -RRB- | denotes | ) |
T14867 | 1006-1009 | NNP | denotes | USA |
T14866 | 1004-1005 | -COMMA- | denotes | , |
T14865 | 1002-1004 | NNP | denotes | CA |
T14864 | 1000-1001 | -COMMA- | denotes | , |
T14863 | 990-1000 | NNP | denotes | Burlingame |
T14862 | 988-989 | -COMMA- | denotes | , |
T14861 | 976-988 | NNP | denotes | Laboratories |
T14860 | 969-975 | NNP | denotes | Vector |
T14859 | 967-968 | -COLON- | denotes | ; |
T14858 | 964-967 | NN | denotes | kit |
T14857 | 960-963 | NN | denotes | ABC |
T14856 | 959-960 | -LRB- | denotes | ( |
T14855 | 951-958 | NN | denotes | complex |
T14854 | 940-950 | NN | denotes | peroxidase |
T14853 | 933-939 | NN | denotes | biotin |
T14852 | 926-932 | NN | denotes | avidin |
T14851 | 922-925 | DT | denotes | the |
T14850 | 919-921 | IN | denotes | of |
T14849 | 910-918 | NN | denotes | addition |
T14848 | 906-909 | DT | denotes | the |
T14847 | 903-905 | IN | denotes | by |
T14846 | 894-902 | VB | denotes | followed |
T14845 | 892-893 | -COMMA- | denotes | , |
T14844 | 889-892 | NNP | denotes | PBS |
T14843 | 886-888 | IN | denotes | in |
T14842 | 879-885 | VB | denotes | washed |
T14841 | 874-878 | VB | denotes | were |
T14840 | 867-873 | NN | denotes | slides |
T14839 | 863-866 | DT | denotes | The |
T14838 | 860-861 | NN | denotes | h |
T14837 | 858-859 | CD | denotes | 2 |
T14836 | 854-857 | IN | denotes | for |
T14835 | 843-853 | NN | denotes | antibodies |
T14834 | 831-842 | JJ | denotes | anti-rabbit |
T14833 | 827-830 | CC | denotes | and |
T14832 | 816-826 | JJ | denotes | anti-mouse |
T14831 | 803-815 | VB | denotes | biotinylated |
T14830 | 798-802 | IN | denotes | with |
T14829 | 788-797 | VB | denotes | incubated |
T14828 | 784-787 | CC | denotes | and |
T14827 | 780-783 | NNP | denotes | PBS |
T14826 | 777-779 | IN | denotes | in |
T14825 | 772-776 | DT | denotes | each |
T14824 | 768-771 | NN | denotes | min |
T14823 | 766-767 | CD | denotes | 5 |
T14822 | 762-765 | IN | denotes | for |
T14821 | 756-761 | NN | denotes | times |
T14820 | 750-755 | CD | denotes | three |
T14819 | 743-749 | VB | denotes | washed |
T14818 | 738-742 | VB | denotes | were |
T14817 | 731-737 | NN | denotes | slides |
T14816 | 727-730 | DT | denotes | the |
T14815 | 725-726 | -COMMA- | denotes | , |
T14814 | 715-725 | RB | denotes | Thereafter |
T14813 | 702-713 | NN | denotes | temperature |
T14812 | 697-701 | NN | denotes | room |
T14811 | 694-696 | IN | denotes | at |
T14810 | 692-693 | NN | denotes | h |
T14809 | 690-691 | CD | denotes | 4 |
T14808 | 686-689 | IN | denotes | for |
T14807 | 680-685 | NN | denotes | serum |
T14806 | 671-679 | VB | denotes | blocking |
T14805 | 668-670 | IN | denotes | in |
T14804 | 657-667 | NN | denotes | antibodies |
T14803 | 646-656 | JJ | denotes | monoclonal |
T14802 | 644-645 | -RRB- | denotes | ) |
T14801 | 636-644 | NN | denotes | dilution |
T14800 | 630-635 | CD | denotes | 1∶200 |
T14799 | 628-629 | -COMMA- | denotes | , |
T14798 | 624-628 | NN | denotes | PCNA |
T14797 | 623-624 | -LRB- | denotes | ( |
T14796 | 615-622 | NN | denotes | antigen |
T14795 | 607-614 | JJ | denotes | nuclear |
T14794 | 602-606 | NN | denotes | cell |
T14793 | 588-601 | VB | denotes | proliferating |
T14792 | 577-587 | JJ | denotes | anti-mouse |
T14791 | 571-576 | NN | denotes | mouse |
T14790 | 563-570 | JJ | denotes | primary |
T14789 | 558-562 | IN | denotes | with |
T14788 | 548-557 | VB | denotes | incubated |
T14787 | 544-547 | CC | denotes | and |
T14786 | 542-543 | -COMMA- | denotes | , |
T14785 | 535-542 | VB | denotes | blotted |
T14784 | 533-534 | -COMMA- | denotes | , |
T14783 | 530-533 | NNP | denotes | PBS |
T14782 | 527-529 | IN | denotes | in |
T14781 | 519-526 | VB | denotes | diluted |
T14780 | 513-518 | NN | denotes | serum |
T14779 | 507-512 | NN | denotes | horse |
T14778 | 500-506 | JJ | denotes | normal |
T14777 | 498-499 | NN | denotes | % |
T14776 | 497-498 | CD | denotes | 3 |
T14775 | 492-496 | IN | denotes | with |
T14774 | 488-491 | NN | denotes | min |
T14773 | 485-487 | CD | denotes | 30 |
T14772 | 481-484 | IN | denotes | for |
T14771 | 473-480 | VB | denotes | blocked |
T14770 | 468-472 | VB | denotes | were |
T14769 | 459-467 | NN | denotes | sections |
T14768 | 455-458 | DT | denotes | The |
T14767 | 450-453 | NN | denotes | min |
T14766 | 448-449 | CD | denotes | 5 |
T14765 | 444-447 | IN | denotes | for |
T14764 | 440-443 | NNP | denotes | PBS |
T14763 | 437-439 | IN | denotes | in |
T14762 | 428-436 | VB | denotes | clearing |
T14761 | 425-427 | IN | denotes | by |
T14760 | 416-424 | VB | denotes | followed |
T14759 | 414-415 | -COMMA- | denotes | , |
T14758 | 411-414 | NN | denotes | min |
T14757 | 408-410 | CD | denotes | 15 |
T14756 | 404-407 | IN | denotes | for |
T14755 | 395-403 | NN | denotes | methanol |
T14754 | 392-394 | IN | denotes | in |
T14753 | 383-391 | NN | denotes | peroxide |
T14752 | 374-382 | NN | denotes | hydrogen |
T14751 | 372-373 | NN | denotes | % |
T14750 | 371-372 | CD | denotes | 3 |
T14749 | 368-370 | IN | denotes | in |
T14748 | 357-367 | NN | denotes | incubation |
T14747 | 354-356 | IN | denotes | by |
T14746 | 345-353 | VB | denotes | quenched |
T14745 | 341-344 | VB | denotes | was |
T14744 | 332-340 | NN | denotes | activity |
T14743 | 321-331 | NN | denotes | peroxidase |
T14742 | 310-320 | JJ | denotes | Endogenous |
T14741 | 299-308 | NN | denotes | retrieval |
T14740 | 291-298 | NN | denotes | antigen |
T14739 | 277-290 | JJ | denotes | heat-mediated |
T14738 | 274-276 | TO | denotes | to |
T14737 | 264-273 | VB | denotes | subjected |
T14736 | 259-263 | RB | denotes | then |
T14735 | 255-258 | CC | denotes | and |
T14734 | 253-254 | -COMMA- | denotes | , |
T14733 | 248-253 | NN | denotes | water |
T14732 | 238-247 | JJ | denotes | distilled |
T14731 | 235-237 | IN | denotes | in |
T14730 | 228-234 | VB | denotes | washed |
T14729 | 226-227 | -COMMA- | denotes | , |
T14728 | 216-226 | VB | denotes | rehydrated |
T14727 | 212-215 | CC | denotes | and |
T14726 | 197-211 | VB | denotes | deparaffinized |
T14725 | 192-196 | VB | denotes | were |
T14724 | 183-191 | NN | denotes | sections |
T14723 | 165-182 | JJ | denotes | paraffin-embedded |
T14722 | 161-164 | DT | denotes | The |
T14721 | 139-159 | NN | denotes | immunohistochemistry |
T14720 | 136-138 | IN | denotes | by |
T14719 | 127-135 | VB | denotes | analyzed |
T14718 | 123-126 | CC | denotes | and |
T14717 | 121-122 | NN | denotes | E |
T14716 | 120-121 | CC | denotes | & |
T14715 | 119-120 | NN | denotes | H |
T14714 | 114-118 | IN | denotes | with |
T14713 | 106-113 | VB | denotes | stained |
T14712 | 101-105 | VB | denotes | were |
T15022 | 1874-1875 | -RRB- | denotes | ) |
T15021 | 1864-1874 | NN | denotes | microscope |
T15020 | 1860-1863 | NN | denotes | DAS |
T15019 | 1859-1860 | -LRB- | denotes | ( |
T15018 | 1848-1858 | NN | denotes | microscopy |
T15017 | 1835-1847 | NN | denotes | fluorescence |
T15016 | 1831-1834 | IN | denotes | for |
T15015 | 1817-1830 | JJ | denotes | cover-slipped |
T15014 | 1813-1816 | CC | denotes | and |
T15013 | 1811-1812 | -COMMA- | denotes | , |
T15012 | 1805-1811 | NN | denotes | slides |
T15011 | 1802-1804 | IN | denotes | on |
T15010 | 1794-1801 | VB | denotes | mounted |
T15009 | 1792-1793 | -COMMA- | denotes | , |
T15008 | 1786-1792 | VB | denotes | rinsed |
T15007 | 1781-1785 | VB | denotes | were |
T15006 | 1772-1780 | NN | denotes | sections |
T15005 | 1768-1771 | DT | denotes | the |
T15004 | 1766-1767 | -COMMA- | denotes | , |
T15003 | 1759-1766 | NNP | denotes | Finally |
T15002 | 1753-1758 | NNP | denotes | 37°C. |
T15001 | 1750-1752 | IN | denotes | at |
T15000 | 1746-1749 | NN | denotes | min |
T14999 | 1743-1745 | CD | denotes | 15 |
T14998 | 1739-1742 | IN | denotes | for |
T14997 | 1737-1738 | -RRB- | denotes | ) |
T14996 | 1733-1737 | NN | denotes | DAPI |
T14995 | 1732-1733 | -LRB- | denotes | ( |
T14994 | 1705-1731 | NN | denotes | 6-diamidino-2-phenylindole |
T14993 | 1704-1705 | -COMMA- | denotes | , |
T14992 | 1702-1704 | NN | denotes | 4′ |
T14991 | 1697-1701 | IN | denotes | with |
T14990 | 1687-1696 | VB | denotes | incubated |
T14989 | 1682-1686 | VB | denotes | were |
T14988 | 1673-1681 | NN | denotes | sections |
T14987 | 1669-1672 | DT | denotes | the |
T14986 | 1667-1668 | -COMMA- | denotes | , |
T14985 | 1663-1667 | RB | denotes | Next |
T14984 | 1649-1661 | NN | denotes | instructions |
T14983 | 1634-1648 | NN | denotes | manufacturer’s |
T14982 | 1630-1633 | DT | denotes | the |
T14981 | 1627-1629 | TO | denotes | to |
T14980 | 1617-1626 | VB | denotes | according |
T14979 | 1615-1616 | -COMMA- | denotes | , |
T14978 | 1611-1615 | DT | denotes | each |
T14977 | 1607-1610 | NN | denotes | min |
T14976 | 1605-1606 | CD | denotes | 5 |
T14975 | 1601-1604 | IN | denotes | for |
T14974 | 1597-1600 | NNP | denotes | PBS |
T14973 | 1595-1596 | NN | denotes | M |
T14972 | 1591-1594 | CD | denotes | 0.1 |
T14971 | 1588-1590 | IN | denotes | in |
T14970 | 1582-1587 | NN | denotes | times |
T14969 | 1576-1581 | CD | denotes | three |
T14968 | 1569-1575 | VB | denotes | washed |
T14967 | 1564-1568 | RB | denotes | then |
T14966 | 1560-1563 | CC | denotes | and |
T14965 | 1558-1559 | -COMMA- | denotes | , |
T14964 | 1554-1558 | NN | denotes | 37°C |
T14963 | 1551-1553 | IN | denotes | at |
T14962 | 1549-1550 | NN | denotes | h |
T14961 | 1547-1548 | CD | denotes | 1 |
T14960 | 1543-1546 | IN | denotes | for |
T14959 | 1541-1542 | -RRB- | denotes | ) |
T14958 | 1539-1541 | NN | denotes | µl |
T14957 | 1536-1538 | CD | denotes | 60 |
T14956 | 1535-1536 | -LRB- | denotes | ( |
T14955 | 1526-1534 | NN | denotes | solution |
T14954 | 1519-1525 | NN | denotes | enzyme |
T14953 | 1515-1518 | CC | denotes | and |
T14952 | 1513-1514 | -RRB- | denotes | ) |
T14951 | 1511-1513 | NN | denotes | µl |
T14950 | 1507-1510 | CD | denotes | 540 |
T14949 | 1506-1507 | -LRB- | denotes | ( |
T14948 | 1497-1505 | NN | denotes | solution |
T14947 | 1488-1496 | NN | denotes | labeling |
T14946 | 1484-1487 | DT | denotes | the |
T14945 | 1481-1483 | IN | denotes | of |
T14944 | 1473-1480 | NN | denotes | mixture |
T14943 | 1471-1472 | DT | denotes | a |
T14942 | 1468-1470 | IN | denotes | in |
T14941 | 1458-1467 | VB | denotes | incubated |
T14940 | 1453-1457 | VB | denotes | were |
T14939 | 1444-1452 | NN | denotes | sections |
T14938 | 1426-1443 | JJ | denotes | paraffin-embedded |
T14937 | 1422-1425 | DT | denotes | the |
T14936 | 1420-1421 | -COMMA- | denotes | , |
T14935 | 1413-1420 | NN | denotes | tissues |
T14934 | 1407-1412 | NN | denotes | tumor |
T14933 | 1403-1406 | DT | denotes | the |
T14932 | 1400-1402 | IN | denotes | in |
T14931 | 1394-1399 | NN | denotes | death |
T14930 | 1389-1393 | NN | denotes | cell |
T14929 | 1379-1388 | JJ | denotes | apoptotic |
T14928 | 1376-1378 | IN | denotes | of |
T14711 | 99-100 | -RRB- | denotes | ) |
T14710 | 94-99 | JJ | denotes | thick |
T14709 | 91-93 | NN | denotes | µm |
T14708 | 89-90 | CD | denotes | 4 |
T14707 | 88-89 | -LRB- | denotes | ( |
T14706 | 79-87 | NN | denotes | Sections |
T14705 | 66-77 | NN | denotes | examination |
T14704 | 62-65 | IN | denotes | for |
T14703 | 53-61 | NN | denotes | paraffin |
T14702 | 50-52 | IN | denotes | in |
T14701 | 41-49 | VB | denotes | embedded |
T14700 | 37-40 | CC | denotes | and |
T14699 | 28-36 | NN | denotes | formalin |
T14698 | 25-27 | IN | denotes | in |
T14697 | 19-24 | VB | denotes | fixed |
T14696 | 14-18 | VB | denotes | were |
T14695 | 4-13 | NN | denotes | specimens |
T14694 | 0-3 | DT | denotes | All |
R10220 | T14695 | T14694 | arg1Of | specimens,All |
R10221 | T14695 | T14696 | arg1Of | specimens,were |
R10222 | T14695 | T14697 | arg2Of | specimens,fixed |
R10223 | T14695 | T14701 | arg2Of | specimens,embedded |
R10224 | T14697 | T14698 | arg1Of | fixed,in |
R10225 | T14697 | T14700 | arg1Of | fixed,and |
R10226 | T14699 | T14698 | arg2Of | formalin,in |
R10227 | T14700 | T14696 | arg2Of | and,were |
R10228 | T14701 | T14700 | arg2Of | embedded,and |
R10229 | T14701 | T14702 | arg1Of | embedded,in |
R10230 | T14703 | T14702 | arg2Of | paraffin,in |
R10231 | T14703 | T14704 | arg1Of | paraffin,for |
R10232 | T14705 | T14704 | arg2Of | examination,for |
R10233 | T14706 | T14707 | arg1Of | Sections,( |
R10234 | T14706 | T14712 | arg1Of | Sections,were |
R10235 | T14706 | T14713 | arg2Of | Sections,stained |
R10236 | T14706 | T14719 | arg2Of | Sections,analyzed |
R10237 | T14709 | T14707 | arg2Of | µm,( |
R10238 | T14709 | T14708 | arg1Of | µm,4 |
R10239 | T14709 | T14710 | arg1Of | µm,thick |
R10240 | T14711 | T14707 | arg3Of | ),( |
R10241 | T14713 | T14714 | arg1Of | stained,with |
R10242 | T14713 | T14718 | arg1Of | stained,and |
R10243 | T14717 | T14714 | arg2Of | E,with |
R10244 | T14717 | T14715 | arg1Of | E,H |
R10245 | T14717 | T14716 | arg1Of | E,& |
R10246 | T14718 | T14712 | arg2Of | and,were |
R10247 | T14719 | T14718 | arg2Of | analyzed,and |
R10248 | T14721 | T14719 | arg1Of | immunohistochemistry,analyzed |
R10249 | T14721 | T14720 | arg2Of | immunohistochemistry,by |
R10250 | T14724 | T14722 | arg1Of | sections,The |
R10251 | T14724 | T14723 | arg1Of | sections,paraffin-embedded |
R10252 | T14724 | T14725 | arg1Of | sections,were |
R10253 | T14724 | T14726 | arg2Of | sections,deparaffinized |
R10254 | T14724 | T14728 | arg2Of | sections,rehydrated |
R10255 | T14724 | T14730 | arg2Of | sections,washed |
R10256 | T14724 | T14737 | arg2Of | sections,subjected |
R10257 | T14726 | T14727 | arg1Of | deparaffinized,and |
R10258 | T14727 | T14729 | arg1Of | and,"," |
R10259 | T14728 | T14727 | arg2Of | rehydrated,and |
R10260 | T14729 | T14735 | arg1Of | ",",and |
R10261 | T14730 | T14729 | arg2Of | washed,"," |
R10262 | T14730 | T14731 | arg1Of | washed,in |
R10263 | T14733 | T14731 | arg2Of | water,in |
R10264 | T14733 | T14732 | arg1Of | water,distilled |
R10265 | T14735 | T14725 | arg2Of | and,were |
R10266 | T14735 | T14734 | arg1Of | and,"," |
R10267 | T14737 | T14735 | arg2Of | subjected,and |
R10268 | T14737 | T14736 | arg1Of | subjected,then |
R10269 | T14737 | T14738 | arg1Of | subjected,to |
R10270 | T14741 | T14738 | arg2Of | retrieval,to |
R10271 | T14741 | T14739 | arg1Of | retrieval,heat-mediated |
R10272 | T14741 | T14740 | arg1Of | retrieval,antigen |
R10273 | T14744 | T14742 | arg1Of | activity,Endogenous |
R10274 | T14744 | T14743 | arg1Of | activity,peroxidase |
R10275 | T14744 | T14745 | arg1Of | activity,was |
R10276 | T14744 | T14746 | arg2Of | activity,quenched |
R10277 | T14746 | T14745 | arg2Of | quenched,was |
R10278 | T14746 | T14759 | arg1Of | quenched,"," |
R10279 | T14746 | T14760 | modOf | quenched,followed |
R10280 | T14748 | T14746 | arg1Of | incubation,quenched |
R10281 | T14748 | T14747 | arg2Of | incubation,by |
R10282 | T14748 | T14749 | arg1Of | incubation,in |
R10283 | T14753 | T14749 | arg2Of | peroxide,in |
R10284 | T14753 | T14750 | arg1Of | peroxide,3 |
R10285 | T14753 | T14751 | arg1Of | peroxide,% |
R10286 | T14753 | T14752 | arg1Of | peroxide,hydrogen |
R10287 | T14753 | T14754 | arg1Of | peroxide,in |
R10288 | T14753 | T14756 | arg1Of | peroxide,for |
R10289 | T14755 | T14754 | arg2Of | methanol,in |
R10290 | T14758 | T14756 | arg2Of | min,for |
R10291 | T14758 | T14757 | arg1Of | min,15 |
R10292 | T14760 | T14761 | arg1Of | followed,by |
R10293 | T14762 | T14761 | arg2Of | clearing,by |
R10294 | T14762 | T14763 | arg1Of | clearing,in |
R10295 | T14762 | T14765 | arg1Of | clearing,for |
R10296 | T14764 | T14763 | arg2Of | PBS,in |
R10297 | T14767 | T14765 | arg2Of | min,for |
R10298 | T14767 | T14766 | arg1Of | min,5 |
R10299 | T14769 | T14768 | arg1Of | sections,The |
R10300 | T14769 | T14770 | arg1Of | sections,were |
R10301 | T14769 | T14771 | arg2Of | sections,blocked |
R10302 | T14769 | T14788 | arg2Of | sections,incubated |
R10303 | T14771 | T14772 | arg1Of | blocked,for |
R10304 | T14771 | T14787 | arg1Of | blocked,and |
R10305 | T14774 | T14772 | arg2Of | min,for |
R10306 | T14774 | T14773 | arg1Of | min,30 |
R10307 | T14774 | T14775 | arg1Of | min,with |
R10308 | T14776 | T14777 | arg1Of | 3,% |
R10309 | T14780 | T14775 | arg2Of | serum,with |
R10310 | T14780 | T14776 | arg1Of | serum,3 |
R10311 | T14780 | T14778 | arg1Of | serum,normal |
R10312 | T14780 | T14779 | arg1Of | serum,horse |
R10313 | T14780 | T14781 | arg2Of | serum,diluted |
R10314 | T14781 | T14782 | arg1Of | diluted,in |
R10315 | T14783 | T14782 | arg2Of | PBS,in |
R10316 | T14783 | T14784 | arg1Of | PBS,"," |
R10317 | T14783 | T14785 | arg2Of | PBS,blotted |
R10318 | T14787 | T14770 | arg2Of | and,were |
R10319 | T14787 | T14786 | arg1Of | and,"," |
R10320 | T14788 | T14787 | arg2Of | incubated,and |
R10321 | T14788 | T14789 | arg1Of | incubated,with |
R10322 | T14791 | T14792 | arg2Of | mouse,anti-mouse |
R10323 | T14796 | T14792 | arg3Of | antigen,anti-mouse |
R10324 | T14796 | T14793 | arg1Of | antigen,proliferating |
R10325 | T14796 | T14794 | arg1Of | antigen,cell |
R10326 | T14796 | T14795 | arg1Of | antigen,nuclear |
R10327 | T14796 | T14797 | arg1Of | antigen,( |
R10328 | T14798 | T14797 | arg2Of | PCNA,( |
R10329 | T14798 | T14799 | arg1Of | PCNA,"," |
R10330 | T14801 | T14799 | arg2Of | dilution,"," |
R10331 | T14801 | T14800 | arg1Of | dilution,1∶200 |
R10332 | T14802 | T14797 | arg3Of | ),( |
R10333 | T14804 | T14789 | arg2Of | antibodies,with |
R10334 | T14804 | T14790 | arg1Of | antibodies,primary |
R10335 | T14804 | T14791 | arg1Of | antibodies,mouse |
R10336 | T14804 | T14803 | arg1Of | antibodies,monoclonal |
R10337 | T14804 | T14805 | arg1Of | antibodies,in |
R10338 | T14806 | T14805 | arg2Of | blocking,in |
R10339 | T14806 | T14808 | arg1Of | blocking,for |
R10340 | T14806 | T14811 | arg1Of | blocking,at |
R10341 | T14807 | T14806 | arg2Of | serum,blocking |
R10342 | T14810 | T14808 | arg2Of | h,for |
R10343 | T14810 | T14809 | arg1Of | h,4 |
R10344 | T14813 | T14811 | arg2Of | temperature,at |
R10345 | T14813 | T14812 | arg1Of | temperature,room |
R10346 | T14817 | T14816 | arg1Of | slides,the |
R10347 | T14817 | T14818 | arg1Of | slides,were |
R10348 | T14817 | T14819 | arg2Of | slides,washed |
R10349 | T14817 | T14829 | arg2Of | slides,incubated |
R10350 | T14819 | T14821 | arg1Of | washed,times |
R10351 | T14819 | T14822 | arg1Of | washed,for |
R10352 | T14819 | T14828 | arg1Of | washed,and |
R10353 | T14821 | T14820 | arg1Of | times,three |
R10354 | T14824 | T14822 | arg2Of | min,for |
R10355 | T14824 | T14823 | arg1Of | min,5 |
R10356 | T14824 | T14825 | arg1Of | min,each |
R10357 | T14824 | T14826 | arg1Of | min,in |
R10358 | T14827 | T14826 | arg2Of | PBS,in |
R10359 | T14828 | T14814 | arg1Of | and,Thereafter |
R10360 | T14828 | T14815 | arg1Of | and,"," |
R10361 | T14828 | T14818 | arg2Of | and,were |
R10362 | T14829 | T14828 | arg2Of | incubated,and |
R10363 | T14829 | T14830 | arg1Of | incubated,with |
R10364 | T14832 | T14833 | arg1Of | anti-mouse,and |
R10365 | T14834 | T14833 | arg2Of | anti-rabbit,and |
R10366 | T14835 | T14830 | arg2Of | antibodies,with |
R10367 | T14835 | T14831 | arg2Of | antibodies,biotinylated |
R10368 | T14835 | T14832 | arg1Of | antibodies,anti-mouse |
R10369 | T14835 | T14834 | arg1Of | antibodies,anti-rabbit |
R10370 | T14835 | T14836 | arg1Of | antibodies,for |
R10371 | T14838 | T14836 | arg2Of | h,for |
R10372 | T14838 | T14837 | arg1Of | h,2 |
R10373 | T14840 | T14839 | arg1Of | slides,The |
R10374 | T14840 | T14841 | arg1Of | slides,were |
R10375 | T14840 | T14842 | arg2Of | slides,washed |
R10376 | T14842 | T14841 | arg2Of | washed,were |
R10377 | T14842 | T14843 | arg1Of | washed,in |
R10378 | T14844 | T14843 | arg2Of | PBS,in |
R10379 | T14844 | T14845 | arg1Of | PBS,"," |
R10380 | T14844 | T14846 | arg2Of | PBS,followed |
R10381 | T14844 | T14856 | arg1Of | PBS,( |
R10382 | T14849 | T14846 | arg1Of | addition,followed |
R10383 | T14849 | T14847 | arg2Of | addition,by |
R10384 | T14849 | T14848 | arg1Of | addition,the |
R10385 | T14849 | T14850 | arg1Of | addition,of |
R10386 | T14855 | T14850 | arg2Of | complex,of |
R10387 | T14855 | T14851 | arg1Of | complex,the |
R10388 | T14855 | T14852 | arg1Of | complex,avidin |
R10389 | T14855 | T14853 | arg1Of | complex,biotin |
R10390 | T14855 | T14854 | arg1Of | complex,peroxidase |
R10391 | T14858 | T14857 | arg1Of | kit,ABC |
R10392 | T14858 | T14859 | arg1Of | kit,; |
R10393 | T14859 | T14856 | arg2Of | ;,( |
R10394 | T14859 | T14866 | arg1Of | ;,"," |
R10395 | T14859 | T14867 | arg1Of | ;,USA |
R10396 | T14861 | T14860 | arg1Of | Laboratories,Vector |
R10397 | T14861 | T14862 | arg1Of | Laboratories,"," |
R10398 | T14862 | T14864 | arg1Of | ",","," |
R10399 | T14863 | T14862 | arg2Of | Burlingame,"," |
R10400 | T14864 | T14859 | arg2Of | ",",; |
R10401 | T14865 | T14864 | arg2Of | CA,"," |
R10402 | T14868 | T14856 | arg3Of | ),( |
R10403 | T14870 | T14869 | arg1Of | slides,The |
R10404 | T14870 | T14871 | arg1Of | slides,were |
R10405 | T14870 | T14872 | arg2Of | slides,washed |
R10406 | T14872 | T14871 | arg2Of | washed,were |
R10407 | T14872 | T14873 | arg1Of | washed,and |
R10408 | T14876 | T14874 | arg1Of | reaction,the |
R10409 | T14876 | T14875 | arg1Of | reaction,peroxidase |
R10410 | T14876 | T14877 | arg1Of | reaction,was |
R10411 | T14876 | T14878 | arg2Of | reaction,developed |
R10412 | T14878 | T14873 | arg2Of | developed,and |
R10413 | T14878 | T14877 | arg2Of | developed,was |
R10414 | T14878 | T14879 | arg1Of | developed,with |
R10415 | T14878 | T14886 | arg1Of | developed,"," |
R10416 | T14878 | T14887 | modOf | developed,followed |
R10417 | T14880 | T14881 | arg1Of | diaminobenzidine,( |
R10418 | T14880 | T14884 | arg1Of | diaminobenzidine,and |
R10419 | T14882 | T14881 | arg2Of | DAB,( |
R10420 | T14883 | T14881 | arg3Of | ),( |
R10421 | T14884 | T14879 | arg2Of | and,with |
R10422 | T14885 | T14884 | arg2Of | peroxide,and |
R10423 | T14889 | T14890 | arg1Of | counterstaining,with |
R10424 | T14889 | T14892 | arg1Of | counterstaining,"," |
R10425 | T14889 | T14893 | modOf | counterstaining,mounting |
R10426 | T14889 | T14897 | arg1Of | counterstaining,and |
R10427 | T14891 | T14890 | arg2Of | hematoxylin,with |
R10428 | T14893 | T14894 | arg1Of | mounting,in |
R10429 | T14895 | T14894 | arg2Of | aqua-mount,in |
R10430 | T14897 | T14887 | arg1Of | and,followed |
R10431 | T14897 | T14888 | arg2Of | and,by |
R10432 | T14897 | T14896 | arg1Of | and,"," |
R10433 | T14897 | T14899 | arg1Of | and,under |
R10434 | T14898 | T14897 | arg2Of | evaluation,and |
R10435 | T14902 | T14899 | arg2Of | microscope,under |
R10436 | T14902 | T14900 | arg1Of | microscope,a |
R10437 | T14902 | T14901 | arg1Of | microscope,light |
R10438 | T14902 | T14903 | arg1Of | microscope,( |
R10439 | T14904 | T14903 | arg2Of | magnification×200,( |
R10440 | T14904 | T14905 | arg1Of | magnification×200,; |
R10441 | T14906 | T14905 | arg2Of | Olympus,; |
R10442 | T14906 | T14907 | arg1Of | Olympus,"," |
R10443 | T14908 | T14907 | arg2Of | Tokyo,"," |
R10444 | T14908 | T14909 | arg1Of | Tokyo,"," |
R10445 | T14910 | T14909 | arg2Of | Japan,"," |
R10446 | T14911 | T14903 | arg3Of | ),( |
R10447 | T14914 | T14912 | arg1Of | control,A |
R10448 | T14914 | T14913 | arg1Of | control,negative |
R10449 | T14914 | T14915 | arg1Of | control,was |
R10450 | T14914 | T14916 | arg2Of | control,included |
R10451 | T14914 | T14921 | arg1Of | control,omitting |
R10452 | T14916 | T14915 | arg2Of | included,was |
R10453 | T14916 | T14917 | arg1Of | included,in |
R10454 | T14916 | T14920 | arg1Of | included,by |
R10455 | T14919 | T14917 | arg2Of | experiments,in |
R10456 | T14919 | T14918 | arg1Of | experiments,all |
R10457 | T14921 | T14920 | arg2Of | omitting,by |
R10458 | T14924 | T14921 | arg2Of | antibody,omitting |
R10459 | T14924 | T14922 | arg1Of | antibody,the |
R10460 | T14924 | T14923 | arg1Of | antibody,primary |
R10461 | T14927 | T14925 | arg2Of | detection,For |
R10462 | T14927 | T14926 | arg1Of | detection,the |
R10463 | T14927 | T14928 | arg1Of | detection,of |
R10464 | T14927 | T14932 | arg1Of | detection,in |
R10465 | T14931 | T14928 | arg2Of | death,of |
R10466 | T14931 | T14929 | arg1Of | death,apoptotic |
R10467 | T14931 | T14930 | arg1Of | death,cell |
R10468 | T14935 | T14932 | arg2Of | tissues,in |
R10469 | T14935 | T14933 | arg1Of | tissues,the |
R10470 | T14935 | T14934 | arg1Of | tissues,tumor |
R10471 | T14939 | T14937 | arg1Of | sections,the |
R10472 | T14939 | T14938 | arg1Of | sections,paraffin-embedded |
R10473 | T14939 | T14940 | arg1Of | sections,were |
R10474 | T14939 | T14941 | arg2Of | sections,incubated |
R10475 | T14939 | T14968 | arg1Of | sections,washed |
R10476 | T14941 | T14940 | arg2Of | incubated,were |
R10477 | T14941 | T14942 | arg1Of | incubated,in |
R10478 | T14941 | T14966 | arg1Of | incubated,and |
R10479 | T14944 | T14945 | arg1Of | mixture,of |
R10480 | T14944 | T14953 | arg1Of | mixture,and |
R10481 | T14948 | T14945 | arg2Of | solution,of |
R10482 | T14948 | T14946 | arg1Of | solution,the |
R10483 | T14948 | T14947 | arg1Of | solution,labeling |
R10484 | T14948 | T14949 | arg1Of | solution,( |
R10485 | T14951 | T14949 | arg2Of | µl,( |
R10486 | T14951 | T14950 | arg1Of | µl,540 |
R10487 | T14952 | T14949 | arg3Of | ),( |
R10488 | T14953 | T14942 | arg2Of | and,in |
R10489 | T14953 | T14943 | arg1Of | and,a |
R10490 | T14955 | T14953 | arg2Of | solution,and |
R10491 | T14955 | T14954 | arg1Of | solution,enzyme |
R10492 | T14955 | T14956 | arg1Of | solution,( |
R10493 | T14955 | T14960 | arg1Of | solution,for |
R10494 | T14958 | T14956 | arg2Of | µl,( |
R10495 | T14958 | T14957 | arg1Of | µl,60 |
R10496 | T14959 | T14956 | arg3Of | ),( |
R10497 | T14962 | T14960 | arg2Of | h,for |
R10498 | T14962 | T14961 | arg1Of | h,1 |
R10499 | T14962 | T14963 | arg1Of | h,at |
R10500 | T14964 | T14963 | arg2Of | 37°C,at |
R10501 | T14966 | T14925 | arg1Of | and,For |
R10502 | T14966 | T14936 | arg1Of | and,"," |
R10503 | T14966 | T14965 | arg1Of | and,"," |
R10504 | T14968 | T14966 | arg2Of | washed,and |
R10505 | T14968 | T14967 | arg1Of | washed,then |
R10506 | T14968 | T14970 | arg1Of | washed,times |
R10507 | T14968 | T14971 | arg1Of | washed,in |
R10508 | T14968 | T14975 | arg1Of | washed,for |
R10509 | T14968 | T14979 | arg1Of | washed,"," |
R10510 | T14968 | T14980 | arg1Of | washed,according |
R10511 | T14970 | T14969 | arg1Of | times,three |
R10512 | T14972 | T14973 | arg1Of | 0.1,M |
R10513 | T14974 | T14971 | arg2Of | PBS,in |
R10514 | T14974 | T14972 | arg1Of | PBS,0.1 |
R10515 | T14977 | T14975 | arg2Of | min,for |
R10516 | T14977 | T14976 | arg1Of | min,5 |
R10517 | T14978 | T14968 | arg2Of | each,washed |
R10518 | T14981 | T14980 | arg2Of | to,according |
R10519 | T14984 | T14981 | arg2Of | instructions,to |
R10520 | T14984 | T14982 | arg1Of | instructions,the |
R10521 | T14984 | T14983 | arg1Of | instructions,manufacturer’s |
R10522 | T14988 | T14987 | arg1Of | sections,the |
R10523 | T14988 | T14989 | arg1Of | sections,were |
R10524 | T14988 | T14990 | arg2Of | sections,incubated |
R10525 | T14988 | T15010 | arg2Of | sections,mounted |
R10526 | T14988 | T15015 | arg1Of | sections,cover-slipped |
R10527 | T14990 | T14989 | arg2Of | incubated,were |
R10528 | T14990 | T14991 | arg1Of | incubated,with |
R10529 | T14990 | T14993 | arg1Of | incubated,"," |
R10530 | T14992 | T14991 | arg2Of | 4′,with |
R10531 | T14993 | T14985 | arg1Of | ",",Next |
R10532 | T14993 | T14986 | arg1Of | ",","," |
R10533 | T14993 | T15010 | modOf | ",",mounted |
R10534 | T14993 | T15015 | modOf | ",",cover-slipped |
R10535 | T14994 | T14995 | arg1Of | 6-diamidino-2-phenylindole,( |
R10536 | T14994 | T14998 | arg1Of | 6-diamidino-2-phenylindole,for |
R10537 | T14994 | T15001 | arg1Of | 6-diamidino-2-phenylindole,at |
R10538 | T14994 | T15007 | arg1Of | 6-diamidino-2-phenylindole,were |
R10539 | T14994 | T15008 | arg2Of | 6-diamidino-2-phenylindole,rinsed |
R10540 | T14996 | T14995 | arg2Of | DAPI,( |
R10541 | T14997 | T14995 | arg3Of | ),( |
R10542 | T15000 | T14998 | arg2Of | min,for |
R10543 | T15000 | T14999 | arg1Of | min,15 |
R10544 | T15003 | T15001 | arg2Of | Finally,at |
R10545 | T15003 | T15002 | arg1Of | Finally,37°C. |
R10546 | T15003 | T15004 | arg1Of | Finally,"," |
R10547 | T15006 | T15004 | arg2Of | sections,"," |
R10548 | T15006 | T15005 | arg1Of | sections,the |
R10549 | T15008 | T14993 | arg2Of | rinsed,"," |
R10550 | T15008 | T15007 | arg2Of | rinsed,were |
R10551 | T15008 | T15009 | arg1Of | rinsed,"," |
R10552 | T15010 | T15011 | arg1Of | mounted,on |
R10553 | T15010 | T15014 | arg1Of | mounted,and |
R10554 | T15012 | T15011 | arg2Of | slides,on |
R10555 | T15014 | T15013 | arg1Of | and,"," |
R10556 | T15015 | T15014 | arg2Of | cover-slipped,and |
R10557 | T15015 | T15016 | arg1Of | cover-slipped,for |
R10558 | T15018 | T15016 | arg2Of | microscopy,for |
R10559 | T15018 | T15017 | arg1Of | microscopy,fluorescence |
R10560 | T15018 | T15019 | arg1Of | microscopy,( |
R10561 | T15021 | T15019 | arg2Of | microscope,( |
R10562 | T15021 | T15020 | arg1Of | microscope,DAS |
R10563 | T15022 | T15019 | arg3Of | ),( |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14659 | 1413-1420 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissues |
T14658 | 680-685 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
T14657 | 513-518 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14678 | 1394-1399 | http://purl.obolibrary.org/obo/GO_0016265 | denotes | death |
T14677 | 1389-1399 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | cell death |
T14676 | 1379-1399 | http://purl.obolibrary.org/obo/GO_0006915 | denotes | apoptotic cell death |
T14675 | 1366-1393 | http://purl.obolibrary.org/obo/GO_0043654 | denotes | detection of apoptotic cell |
T14674 | 1002-1004 | http://purl.obolibrary.org/obo/GO_0033968 | denotes | CA |
T14673 | 1043-1062 | http://purl.obolibrary.org/obo/GO_0004601 | denotes | peroxidase reaction |
T14672 | 321-340 | http://purl.obolibrary.org/obo/GO_0004601 | denotes | peroxidase activity |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14692 | 1002-1004 | http://purl.obolibrary.org/obo/GO_0033968 | denotes | CA |
T14691 | 1348-1356 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibody |
T14690 | 843-853 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
T14689 | 657-667 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
T14688 | 1043-1062 | http://purl.obolibrary.org/obo/GO_0004601 | denotes | peroxidase reaction |
T14687 | 321-340 | http://purl.obolibrary.org/obo/GO_0004601 | denotes | peroxidase activity |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14686 | 1348-1356 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibody |
T14685 | 843-853 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
T14684 | 657-667 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
T14683 | 1348-1356 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibody |
T14682 | 843-853 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
T14681 | 657-667 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
T14680 | 1389-1393 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T14679 | 602-606 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14671 | 1663-1876 | Sentence | denotes | Next, the sections were incubated with 4′,6-diamidino-2-phenylindole (DAPI) for 15 min at 37°C. Finally, the sections were rinsed, mounted on slides, and cover-slipped for fluorescence microscopy (DAS microscope). |
T14670 | 1358-1662 | Sentence | denotes | For the detection of apoptotic cell death in the tumor tissues, the paraffin-embedded sections were incubated in a mixture of the labeling solution (540 µl) and enzyme solution (60 µl) for 1 h at 37°C, and then washed three times in 0.1 M PBS for 5 min each, according to the manufacturer’s instructions. |
T14669 | 1273-1357 | Sentence | denotes | A negative control was included in all experiments by omitting the primary antibody. |
T14668 | 1012-1272 | Sentence | denotes | The slides were washed and the peroxidase reaction was developed with diaminobenzidine (DAB) and peroxide, followed by counterstaining with hematoxylin, mounting in aqua-mount, and evaluation under a light microscope (magnification×200; Olympus, Tokyo, Japan). |
T14667 | 863-1011 | Sentence | denotes | The slides were washed in PBS, followed by the addition of the avidin biotin peroxidase complex (ABC kit; Vector Laboratories, Burlingame, CA, USA). |
T14666 | 715-862 | Sentence | denotes | Thereafter, the slides were washed three times for 5 min each in PBS and incubated with biotinylated anti-mouse and anti-rabbit antibodies for 2 h. |
T14665 | 455-714 | Sentence | denotes | The sections were blocked for 30 min with 3% normal horse serum diluted in PBS, blotted, and incubated with primary mouse anti-mouse proliferating cell nuclear antigen (PCNA, 1∶200 dilution) monoclonal antibodies in blocking serum for 4 h at room temperature. |
T14664 | 310-454 | Sentence | denotes | Endogenous peroxidase activity was quenched by incubation in 3% hydrogen peroxide in methanol for 15 min, followed by clearing in PBS for 5 min. |
T14663 | 161-309 | Sentence | denotes | The paraffin-embedded sections were deparaffinized and rehydrated, washed in distilled water, and then subjected to heat-mediated antigen retrieval. |
T14662 | 79-160 | Sentence | denotes | Sections (4 µm thick) were stained with H&E and analyzed by immunohistochemistry. |
T14661 | 0-78 | Sentence | denotes | All specimens were fixed in formalin and embedded in paraffin for examination. |
T227 | 0-78 | Sentence | denotes | All specimens were fixed in formalin and embedded in paraffin for examination. |
T228 | 79-160 | Sentence | denotes | Sections (4 µm thick) were stained with H&E and analyzed by immunohistochemistry. |
T229 | 161-309 | Sentence | denotes | The paraffin-embedded sections were deparaffinized and rehydrated, washed in distilled water, and then subjected to heat-mediated antigen retrieval. |
T230 | 310-454 | Sentence | denotes | Endogenous peroxidase activity was quenched by incubation in 3% hydrogen peroxide in methanol for 15 min, followed by clearing in PBS for 5 min. |
T231 | 455-714 | Sentence | denotes | The sections were blocked for 30 min with 3% normal horse serum diluted in PBS, blotted, and incubated with primary mouse anti-mouse proliferating cell nuclear antigen (PCNA, 1∶200 dilution) monoclonal antibodies in blocking serum for 4 h at room temperature. |
T232 | 715-862 | Sentence | denotes | Thereafter, the slides were washed three times for 5 min each in PBS and incubated with biotinylated anti-mouse and anti-rabbit antibodies for 2 h. |
T233 | 863-1011 | Sentence | denotes | The slides were washed in PBS, followed by the addition of the avidin biotin peroxidase complex (ABC kit; Vector Laboratories, Burlingame, CA, USA). |
T234 | 1012-1272 | Sentence | denotes | The slides were washed and the peroxidase reaction was developed with diaminobenzidine (DAB) and peroxide, followed by counterstaining with hematoxylin, mounting in aqua-mount, and evaluation under a light microscope (magnification×200; Olympus, Tokyo, Japan). |
T235 | 1273-1357 | Sentence | denotes | A negative control was included in all experiments by omitting the primary antibody. |
T236 | 1358-1662 | Sentence | denotes | For the detection of apoptotic cell death in the tumor tissues, the paraffin-embedded sections were incubated in a mixture of the labeling solution (540 µl) and enzyme solution (60 µl) for 1 h at 37°C, and then washed three times in 0.1 M PBS for 5 min each, according to the manufacturer’s instructions. |
T237 | 1663-1758 | Sentence | denotes | Next, the sections were incubated with 4′,6-diamidino-2-phenylindole (DAPI) for 15 min at 37°C. |
T238 | 1759-1876 | Sentence | denotes | Finally, the sections were rinsed, mounted on slides, and cover-slipped for fluorescence microscopy (DAS microscope). |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15412 | 1273-1356 | Positive_regulation | denotes | A negative control was included in all experiments by omitting the primary antibody |
T15411 | 259-308 | Binding | denotes | then subjected to heat-mediated antigen retrieval |
T15410 | 1519-1542 | Entity | denotes | enzyme solution (60 µl) |
T15409 | 28-36 | Entity | denotes | formalin |
T15408 | 636-644 | Entity | denotes | dilution |
T15407 | 919-958 | Protein | denotes | of the avidin biotin peroxidase complex |
T15406 | 607-629 | Protein | denotes | nuclear antigen (PCNA, |
T15405 | 646-667 | Protein | denotes | monoclonal antibodies |
T15404 | 919-958 | Entity | denotes | of the avidin biotin peroxidase complex |
T15403 | 1109-1118 | Entity | denotes | peroxide, |
T15402 | 1717-1738 | Entity | denotes | 2-phenylindole (DAPI) |
T15401 | 165-182 | Entity | denotes | paraffin-embedded |
T15400 | 690-693 | Entity | denotes | 4 h |
T15399 | 1519-1525 | Protein | denotes | enzyme |
T15398 | 291-298 | Entity | denotes | antigen |
T15397 | 1336-1356 | Entity | denotes | the primary antibody |
T15396 | 919-958 | Entity | denotes | of the avidin biotin peroxidase complex |
T15395 | 1152-1163 | Entity | denotes | hematoxylin |
T15394 | 1043-1053 | Protein | denotes | peroxidase |
T15393 | 1547-1559 | Entity | denotes | 1 h at 37°C, |
T15392 | 1733-1737 | Entity | denotes | DAPI |
T15391 | 53-61 | Entity | denotes | paraffin |
T15390 | 1471-1542 | Entity | denotes | a mixture of the labeling solution (540 µl) and enzyme solution (60 µl) |
T15389 | 1426-1443 | Entity | denotes | paraffin-embedded |
T15388 | 1860-1863 | Entity | denotes | DAS |
T15387 | 843-853 | Entity | denotes | antibodies |
T15386 | 321-331 | Protein | denotes | peroxidase |
T15385 | 602-635 | Entity | denotes | cell nuclear antigen (PCNA, 1∶200 |
T15384 | 1484-1514 | Entity | denotes | the labeling solution (540 µl) |
T15383 | 940-950 | Protein | denotes | peroxidase |
T15382 | 624-628 | Protein | denotes | PCNA |
T15381 | 395-403 | Entity | denotes | methanol |
T15380 | 1177-1181 | Entity | denotes | aqua |
T15379 | 860-861 | Entity | denotes | h |
T15378 | 371-403 | Entity | denotes | 3% hydrogen peroxide in methanol |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15351 | 1743-1745 | CD | denotes | 15 |
T15377 | 1875-1876 | . | denotes | . |
T15376 | 1874-1875 | -RRB- | denotes | ) |
T15375 | 1864-1874 | NN | denotes | microscope |
T15374 | 1860-1863 | NNP | denotes | DAS |
T15373 | 1859-1860 | -LRB- | denotes | ( |
T15372 | 1848-1858 | NN | denotes | microscopy |
T15371 | 1835-1847 | NN | denotes | fluorescence |
T15370 | 1831-1834 | IN | denotes | for |
T15369 | 1817-1830 | JJ | denotes | cover-slipped |
T15368 | 1813-1816 | CC | denotes | and |
T15367 | 1811-1812 | , | denotes | , |
T15366 | 1805-1811 | NNS | denotes | slides |
T15365 | 1802-1804 | IN | denotes | on |
T15364 | 1794-1801 | VBN | denotes | mounted |
T15363 | 1792-1793 | , | denotes | , |
T15362 | 1786-1792 | VBN | denotes | rinsed |
T15361 | 1781-1785 | VBD | denotes | were |
T15360 | 1772-1780 | NNS | denotes | sections |
T15359 | 1768-1771 | DT | denotes | the |
T15358 | 1766-1767 | , | denotes | , |
T15357 | 1759-1766 | RB | denotes | Finally |
T15356 | 1756-1758 | NNP | denotes | C. |
T15355 | 1755-1756 | CD | denotes | ° |
T15354 | 1753-1755 | CD | denotes | 37 |
T15353 | 1750-1752 | IN | denotes | at |
T15352 | 1746-1749 | NN | denotes | min |
T15350 | 1739-1742 | IN | denotes | for |
T15349 | 1737-1738 | -RRB- | denotes | ) |
T15348 | 1733-1737 | NNP | denotes | DAPI |
T15347 | 1732-1733 | -LRB- | denotes | ( |
T15346 | 1707-1731 | NN | denotes | diamidino-2-phenylindole |
T15345 | 1706-1707 | : | denotes | - |
T15344 | 1704-1706 | SYM | denotes | ,6 |
T15343 | 1703-1704 | CD | denotes | ′ |
T15342 | 1702-1703 | CD | denotes | 4 |
T15341 | 1697-1701 | IN | denotes | with |
T15340 | 1687-1696 | VBN | denotes | incubated |
T15339 | 1682-1686 | VBD | denotes | were |
T15338 | 1673-1681 | NNS | denotes | sections |
T15337 | 1669-1672 | DT | denotes | the |
T15336 | 1667-1668 | , | denotes | , |
T15335 | 1663-1667 | JJ | denotes | Next |
T15334 | 1661-1662 | . | denotes | . |
T15333 | 1649-1661 | NNS | denotes | instructions |
T15332 | 1634-1646 | NN | denotes | manufacturer |
T15331 | 1630-1633 | DT | denotes | the |
T15330 | 1627-1629 | TO | denotes | to |
T15329 | 1617-1626 | VBG | denotes | according |
T15328 | 1615-1616 | , | denotes | , |
T15327 | 1611-1615 | DT | denotes | each |
T15326 | 1607-1610 | NN | denotes | min |
T15325 | 1605-1606 | CD | denotes | 5 |
T15324 | 1601-1604 | IN | denotes | for |
T15323 | 1597-1600 | NNP | denotes | PBS |
T15322 | 1595-1596 | NNP | denotes | M |
T15321 | 1591-1594 | CD | denotes | 0.1 |
T15320 | 1588-1590 | IN | denotes | in |
T15319 | 1582-1587 | NNS | denotes | times |
T15318 | 1576-1581 | CD | denotes | three |
T15317 | 1569-1575 | VBD | denotes | washed |
T15316 | 1564-1568 | RB | denotes | then |
T15315 | 1560-1563 | CC | denotes | and |
T15314 | 1558-1559 | , | denotes | , |
T15313 | 1557-1558 | NNP | denotes | C |
T15312 | 1556-1557 | CD | denotes | ° |
T15311 | 1554-1556 | CD | denotes | 37 |
T15310 | 1551-1553 | IN | denotes | at |
T15309 | 1549-1550 | NN | denotes | h |
T15308 | 1547-1548 | CD | denotes | 1 |
T15307 | 1543-1546 | IN | denotes | for |
T15306 | 1541-1542 | -RRB- | denotes | ) |
T15305 | 1539-1541 | NN | denotes | µl |
T15304 | 1536-1538 | CD | denotes | 60 |
T15303 | 1535-1536 | -LRB- | denotes | ( |
T15302 | 1526-1534 | NN | denotes | solution |
T15301 | 1519-1525 | VB | denotes | enzyme |
T15300 | 1515-1518 | CC | denotes | and |
T15299 | 1513-1514 | -RRB- | denotes | ) |
T15298 | 1511-1513 | NN | denotes | µl |
T15297 | 1507-1510 | CD | denotes | 540 |
T15296 | 1506-1507 | -LRB- | denotes | ( |
T15295 | 1497-1505 | NN | denotes | solution |
T15294 | 1488-1496 | VBG | denotes | labeling |
T15293 | 1484-1487 | DT | denotes | the |
T15292 | 1481-1483 | IN | denotes | of |
T15291 | 1473-1480 | NN | denotes | mixture |
T15290 | 1471-1472 | DT | denotes | a |
T15289 | 1468-1470 | IN | denotes | in |
T15288 | 1458-1467 | VBN | denotes | incubated |
T15287 | 1453-1457 | VBD | denotes | were |
T15286 | 1444-1452 | NNS | denotes | sections |
T15285 | 1426-1443 | JJ | denotes | paraffin-embedded |
T15284 | 1422-1425 | DT | denotes | the |
T15283 | 1420-1421 | , | denotes | , |
T15282 | 1413-1420 | NNS | denotes | tissues |
T15281 | 1407-1412 | NN | denotes | tumor |
T15280 | 1403-1406 | DT | denotes | the |
T15279 | 1400-1402 | IN | denotes | in |
T15278 | 1394-1399 | NN | denotes | death |
T15277 | 1389-1393 | NN | denotes | cell |
T15276 | 1379-1388 | JJ | denotes | apoptotic |
T15275 | 1376-1378 | IN | denotes | of |
T15274 | 1366-1375 | NN | denotes | detection |
T15273 | 1362-1365 | DT | denotes | the |
T15272 | 1358-1361 | IN | denotes | For |
T15271 | 1356-1357 | . | denotes | . |
T15270 | 1348-1356 | NN | denotes | antibody |
T15269 | 1340-1347 | JJ | denotes | primary |
T15268 | 1336-1339 | DT | denotes | the |
T15267 | 1327-1335 | VBG | denotes | omitting |
T15266 | 1324-1326 | IN | denotes | by |
T15265 | 1312-1323 | NNS | denotes | experiments |
T15264 | 1308-1311 | DT | denotes | all |
T15263 | 1305-1307 | IN | denotes | in |
T15262 | 1296-1304 | VBN | denotes | included |
T15261 | 1292-1295 | VBD | denotes | was |
T15260 | 1284-1291 | NN | denotes | control |
T15259 | 1275-1283 | JJ | denotes | negative |
T15258 | 1273-1274 | DT | denotes | A |
T15257 | 1271-1272 | . | denotes | . |
T15256 | 1270-1271 | -RRB- | denotes | ) |
T15255 | 1265-1270 | NNP | denotes | Japan |
T15254 | 1263-1264 | , | denotes | , |
T15253 | 1258-1263 | NNP | denotes | Tokyo |
T15252 | 1256-1257 | , | denotes | , |
T15251 | 1249-1256 | NNP | denotes | Olympus |
T15250 | 1247-1248 | : | denotes | ; |
T15249 | 1244-1247 | CD | denotes | 200 |
T15248 | 1243-1244 | RB | denotes | × |
T15247 | 1230-1243 | NN | denotes | magnification |
T15117 | 507-512 | NN | denotes | horse |
T15116 | 500-506 | JJ | denotes | normal |
T15115 | 498-499 | NN | denotes | % |
T15114 | 497-498 | CD | denotes | 3 |
T15113 | 492-496 | IN | denotes | with |
T15112 | 488-491 | NN | denotes | min |
T15111 | 485-487 | CD | denotes | 30 |
T15110 | 481-484 | IN | denotes | for |
T15109 | 473-480 | VBN | denotes | blocked |
T15108 | 468-472 | VBD | denotes | were |
T15107 | 459-467 | NNS | denotes | sections |
T15106 | 455-458 | DT | denotes | The |
T15105 | 453-454 | . | denotes | . |
T15104 | 450-453 | NN | denotes | min |
T15103 | 448-449 | CD | denotes | 5 |
T15102 | 444-447 | IN | denotes | for |
T15101 | 440-443 | NNP | denotes | PBS |
T15100 | 437-439 | IN | denotes | in |
T15099 | 428-436 | VBG | denotes | clearing |
T15098 | 425-427 | IN | denotes | by |
T15097 | 416-424 | VBN | denotes | followed |
T15096 | 414-415 | , | denotes | , |
T15095 | 411-414 | NN | denotes | min |
T15094 | 408-410 | CD | denotes | 15 |
T15093 | 404-407 | IN | denotes | for |
T15092 | 395-403 | NN | denotes | methanol |
T15091 | 392-394 | IN | denotes | in |
T15090 | 383-391 | NN | denotes | peroxide |
T15089 | 374-382 | NN | denotes | hydrogen |
T15088 | 372-373 | NN | denotes | % |
T15087 | 371-372 | CD | denotes | 3 |
T15086 | 368-370 | IN | denotes | in |
T15085 | 357-367 | NN | denotes | incubation |
T15084 | 354-356 | IN | denotes | by |
T15083 | 345-353 | VBN | denotes | quenched |
T15082 | 341-344 | VBD | denotes | was |
T15081 | 332-340 | NN | denotes | activity |
T15080 | 321-331 | NN | denotes | peroxidase |
T15079 | 310-320 | JJ | denotes | Endogenous |
T15078 | 308-309 | . | denotes | . |
T15077 | 299-308 | NN | denotes | retrieval |
T15076 | 291-298 | NN | denotes | antigen |
T15075 | 277-290 | JJ | denotes | heat-mediated |
T15074 | 274-276 | TO | denotes | to |
T15073 | 264-273 | VBN | denotes | subjected |
T15072 | 259-263 | RB | denotes | then |
T15071 | 255-258 | CC | denotes | and |
T15070 | 253-254 | , | denotes | , |
T15069 | 248-253 | NN | denotes | water |
T15068 | 238-247 | JJ | denotes | distilled |
T15067 | 235-237 | IN | denotes | in |
T15066 | 228-234 | VBN | denotes | washed |
T15065 | 226-227 | , | denotes | , |
T15064 | 216-226 | VBN | denotes | rehydrated |
T15063 | 212-215 | CC | denotes | and |
T15062 | 197-211 | VBN | denotes | deparaffinized |
T15061 | 192-196 | VBD | denotes | were |
T15060 | 183-191 | NNS | denotes | sections |
T15059 | 165-182 | JJ | denotes | paraffin-embedded |
T15058 | 161-164 | DT | denotes | The |
T15057 | 159-160 | . | denotes | . |
T15056 | 139-159 | NN | denotes | immunohistochemistry |
T15055 | 136-138 | IN | denotes | by |
T15054 | 127-135 | VBN | denotes | analyzed |
T15053 | 123-126 | CC | denotes | and |
T15052 | 119-122 | NNP | denotes | H&E |
T15051 | 114-118 | IN | denotes | with |
T15050 | 106-113 | VBN | denotes | stained |
T15049 | 101-105 | VBD | denotes | were |
T15048 | 99-100 | -RRB- | denotes | ) |
T15047 | 94-99 | JJ | denotes | thick |
T15046 | 91-93 | NN | denotes | µm |
T15045 | 89-90 | CD | denotes | 4 |
T15044 | 88-89 | -LRB- | denotes | ( |
T15043 | 79-87 | NNS | denotes | Sections |
T15042 | 77-78 | . | denotes | . |
T15041 | 66-77 | NN | denotes | examination |
T15040 | 62-65 | IN | denotes | for |
T15039 | 53-61 | NN | denotes | paraffin |
T15038 | 50-52 | IN | denotes | in |
T15037 | 41-49 | VBN | denotes | embedded |
T15036 | 37-40 | CC | denotes | and |
T15035 | 28-36 | NN | denotes | formalin |
T15034 | 25-27 | IN | denotes | in |
T15033 | 19-24 | VBN | denotes | fixed |
T15032 | 14-18 | VBD | denotes | were |
T15031 | 4-13 | NNS | denotes | specimens |
T15030 | 0-3 | NNP | denotes | All |
T15246 | 1229-1230 | -LRB- | denotes | ( |
T15245 | 1218-1228 | NN | denotes | microscope |
T15244 | 1212-1217 | JJ | denotes | light |
T15243 | 1210-1211 | DT | denotes | a |
T15242 | 1204-1209 | IN | denotes | under |
T15241 | 1193-1203 | NN | denotes | evaluation |
T15240 | 1189-1192 | CC | denotes | and |
T15239 | 1187-1188 | , | denotes | , |
T15238 | 1177-1187 | JJ | denotes | aqua-mount |
T15237 | 1174-1176 | IN | denotes | in |
T15236 | 1165-1173 | VBG | denotes | mounting |
T15235 | 1163-1164 | , | denotes | , |
T15234 | 1152-1163 | NN | denotes | hematoxylin |
T15233 | 1147-1151 | IN | denotes | with |
T15232 | 1131-1146 | VBG | denotes | counterstaining |
T15231 | 1128-1130 | IN | denotes | by |
T15230 | 1119-1127 | VBN | denotes | followed |
T15229 | 1117-1118 | , | denotes | , |
T15228 | 1109-1117 | NN | denotes | peroxide |
T15227 | 1105-1108 | CC | denotes | and |
T15226 | 1103-1104 | -RRB- | denotes | ) |
T15225 | 1100-1103 | NNP | denotes | DAB |
T15224 | 1099-1100 | -LRB- | denotes | ( |
T15199 | 960-963 | NNP | denotes | ABC |
T15198 | 959-960 | -LRB- | denotes | ( |
T15197 | 951-958 | NN | denotes | complex |
T15196 | 940-950 | NN | denotes | peroxidase |
T15195 | 933-939 | NN | denotes | biotin |
T15194 | 926-932 | NN | denotes | avidin |
T15193 | 922-925 | DT | denotes | the |
T15192 | 919-921 | IN | denotes | of |
T15191 | 910-918 | NN | denotes | addition |
T15190 | 906-909 | DT | denotes | the |
T15189 | 903-905 | IN | denotes | by |
T15188 | 894-902 | VBN | denotes | followed |
T15187 | 892-893 | , | denotes | , |
T15186 | 889-892 | NNP | denotes | PBS |
T15185 | 886-888 | IN | denotes | in |
T15184 | 879-885 | VBN | denotes | washed |
T15183 | 874-878 | VBD | denotes | were |
T15182 | 867-873 | NNS | denotes | slides |
T15181 | 863-866 | DT | denotes | The |
T15180 | 861-862 | . | denotes | . |
T15179 | 860-861 | NN | denotes | h |
T15178 | 858-859 | CD | denotes | 2 |
T15177 | 854-857 | IN | denotes | for |
T15176 | 843-853 | NNS | denotes | antibodies |
T15175 | 831-842 | JJ | denotes | anti-rabbit |
T15174 | 827-830 | CC | denotes | and |
T15173 | 816-826 | NN | denotes | anti-mouse |
T15172 | 803-815 | JJ | denotes | biotinylated |
T15171 | 798-802 | IN | denotes | with |
T15170 | 788-797 | VBN | denotes | incubated |
T15169 | 784-787 | CC | denotes | and |
T15168 | 780-783 | NNP | denotes | PBS |
T15167 | 777-779 | IN | denotes | in |
T15166 | 772-776 | DT | denotes | each |
T15165 | 768-771 | NN | denotes | min |
T15164 | 766-767 | CD | denotes | 5 |
T15163 | 762-765 | IN | denotes | for |
T15162 | 756-761 | NNS | denotes | times |
T15161 | 750-755 | CD | denotes | three |
T15160 | 743-749 | VBN | denotes | washed |
T15159 | 738-742 | VBD | denotes | were |
T15158 | 731-737 | NNS | denotes | slides |
T15157 | 727-730 | DT | denotes | the |
T15156 | 725-726 | , | denotes | , |
T15155 | 715-725 | RB | denotes | Thereafter |
T15154 | 713-714 | . | denotes | . |
T15153 | 702-713 | NN | denotes | temperature |
T15152 | 697-701 | NN | denotes | room |
T15151 | 694-696 | IN | denotes | at |
T15150 | 692-693 | NN | denotes | h |
T15149 | 690-691 | CD | denotes | 4 |
T15148 | 686-689 | IN | denotes | for |
T15147 | 680-685 | NN | denotes | serum |
T15146 | 671-679 | VBG | denotes | blocking |
T15145 | 668-670 | IN | denotes | in |
T15144 | 657-667 | NNS | denotes | antibodies |
T15143 | 646-656 | JJ | denotes | monoclonal |
T15142 | 644-645 | -RRB- | denotes | ) |
T15141 | 636-644 | NN | denotes | dilution |
T15140 | 632-635 | CD | denotes | 200 |
T15139 | 631-632 | CD | denotes | ∶ |
T15138 | 630-631 | CD | denotes | 1 |
T15137 | 628-629 | , | denotes | , |
T15136 | 624-628 | NNP | denotes | PCNA |
T15135 | 623-624 | -LRB- | denotes | ( |
T15134 | 615-622 | NN | denotes | antigen |
T15133 | 607-614 | JJ | denotes | nuclear |
T15132 | 602-606 | NN | denotes | cell |
T15131 | 588-601 | VBG | denotes | proliferating |
T15130 | 577-587 | JJ | denotes | anti-mouse |
T15129 | 571-576 | NN | denotes | mouse |
T15128 | 563-570 | JJ | denotes | primary |
T15127 | 558-562 | IN | denotes | with |
T15125 | 544-547 | CC | denotes | and |
T15124 | 542-543 | , | denotes | , |
T15123 | 535-542 | VBD | denotes | blotted |
T15122 | 533-534 | , | denotes | , |
T15121 | 530-533 | NNP | denotes | PBS |
T15120 | 527-529 | IN | denotes | in |
T15119 | 519-526 | VBN | denotes | diluted |
T15118 | 513-518 | NN | denotes | serum |
T15223 | 1082-1098 | NN | denotes | diaminobenzidine |
T15222 | 1077-1081 | IN | denotes | with |
T15221 | 1067-1076 | VBN | denotes | developed |
T15220 | 1063-1066 | VBD | denotes | was |
T15219 | 1054-1062 | NN | denotes | reaction |
T15218 | 1043-1053 | JJ | denotes | peroxidase |
T15217 | 1039-1042 | DT | denotes | the |
T15216 | 1035-1038 | CC | denotes | and |
T15215 | 1028-1034 | VBN | denotes | washed |
T15214 | 1023-1027 | VBD | denotes | were |
T15213 | 1016-1022 | NNS | denotes | slides |
T15212 | 1012-1015 | DT | denotes | The |
T15211 | 1010-1011 | . | denotes | . |
T15210 | 1009-1010 | -RRB- | denotes | ) |
T15209 | 1006-1009 | NNP | denotes | USA |
T15208 | 1004-1005 | , | denotes | , |
T15207 | 1002-1004 | NNP | denotes | CA |
T15206 | 1000-1001 | , | denotes | , |
T15205 | 990-1000 | NNP | denotes | Burlingame |
T15204 | 988-989 | , | denotes | , |
T15203 | 976-988 | NNPS | denotes | Laboratories |
T15202 | 969-975 | NNP | denotes | Vector |
T15201 | 967-968 | : | denotes | ; |
T15200 | 964-967 | NN | denotes | kit |
T15126 | 548-557 | VBN | denotes | incubated |
R10850 | T15315 | T15288 | cc | and,incubated |
R10851 | T15316 | T15317 | advmod | then,washed |
R10565 | T15030 | T15031 | det | All,specimens |
R10566 | T15031 | T15033 | nsubjpass | specimens,fixed |
R10567 | T15032 | T15033 | auxpass | were,fixed |
R10568 | T15033 | T15033 | ROOT | fixed,fixed |
R10569 | T15034 | T15033 | prep | in,fixed |
R10570 | T15035 | T15034 | pobj | formalin,in |
R10571 | T15036 | T15033 | cc | and,fixed |
R10572 | T15037 | T15033 | conj | embedded,fixed |
R10573 | T15038 | T15037 | prep | in,embedded |
R10574 | T15039 | T15038 | pobj | paraffin,in |
R10575 | T15040 | T15037 | prep | for,embedded |
R10576 | T15041 | T15040 | pobj | examination,for |
R10577 | T15042 | T15033 | punct | .,fixed |
R10578 | T15043 | T15050 | nsubjpass | Sections,stained |
R10579 | T15044 | T15043 | punct | (,Sections |
R10580 | T15045 | T15046 | nummod | 4,µm |
R10581 | T15046 | T15047 | npadvmod | µm,thick |
R10582 | T15047 | T15043 | appos | thick,Sections |
R10583 | T15048 | T15043 | punct | ),Sections |
R10584 | T15049 | T15050 | auxpass | were,stained |
R10585 | T15050 | T15050 | ROOT | stained,stained |
R10586 | T15051 | T15050 | prep | with,stained |
R10587 | T15052 | T15051 | pobj | H&E,with |
R10588 | T15053 | T15050 | cc | and,stained |
R10589 | T15054 | T15050 | conj | analyzed,stained |
R10590 | T15055 | T15054 | agent | by,analyzed |
R10591 | T15056 | T15055 | pobj | immunohistochemistry,by |
R10592 | T15057 | T15050 | punct | .,stained |
R10593 | T15058 | T15060 | det | The,sections |
R10594 | T15059 | T15060 | amod | paraffin-embedded,sections |
R10595 | T15060 | T15062 | nsubjpass | sections,deparaffinized |
R10596 | T15061 | T15062 | auxpass | were,deparaffinized |
R10597 | T15062 | T15062 | ROOT | deparaffinized,deparaffinized |
R10598 | T15063 | T15062 | cc | and,deparaffinized |
R10599 | T15064 | T15062 | conj | rehydrated,deparaffinized |
R10600 | T15065 | T15064 | punct | ",",rehydrated |
R10601 | T15066 | T15064 | conj | washed,rehydrated |
R10602 | T15067 | T15066 | prep | in,washed |
R10603 | T15068 | T15069 | amod | distilled,water |
R10604 | T15069 | T15067 | pobj | water,in |
R10605 | T15070 | T15066 | punct | ",",washed |
R10606 | T15071 | T15066 | cc | and,washed |
R10607 | T15072 | T15073 | advmod | then,subjected |
R10608 | T15073 | T15066 | conj | subjected,washed |
R10609 | T15074 | T15073 | prep | to,subjected |
R10610 | T15075 | T15077 | amod | heat-mediated,retrieval |
R10611 | T15076 | T15077 | compound | antigen,retrieval |
R10612 | T15077 | T15074 | pobj | retrieval,to |
R10613 | T15078 | T15062 | punct | .,deparaffinized |
R10614 | T15079 | T15081 | amod | Endogenous,activity |
R10615 | T15080 | T15081 | compound | peroxidase,activity |
R10616 | T15081 | T15083 | nsubjpass | activity,quenched |
R10617 | T15082 | T15083 | auxpass | was,quenched |
R10618 | T15083 | T15083 | ROOT | quenched,quenched |
R10619 | T15084 | T15083 | agent | by,quenched |
R10620 | T15085 | T15084 | pobj | incubation,by |
R10621 | T15086 | T15083 | prep | in,quenched |
R10622 | T15087 | T15088 | nummod | 3,% |
R10623 | T15088 | T15090 | compound | %,peroxide |
R10624 | T15089 | T15090 | compound | hydrogen,peroxide |
R10625 | T15090 | T15086 | pobj | peroxide,in |
R10626 | T15091 | T15083 | prep | in,quenched |
R10627 | T15092 | T15091 | pobj | methanol,in |
R10628 | T15093 | T15083 | prep | for,quenched |
R10629 | T15094 | T15095 | nummod | 15,min |
R10630 | T15095 | T15093 | pobj | min,for |
R10631 | T15096 | T15095 | punct | ",",min |
R10632 | T15097 | T15083 | advcl | followed,quenched |
R10633 | T15098 | T15097 | prep | by,followed |
R10634 | T15099 | T15098 | pcomp | clearing,by |
R10635 | T15100 | T15099 | prep | in,clearing |
R10636 | T15101 | T15100 | pobj | PBS,in |
R10637 | T15102 | T15099 | prep | for,clearing |
R10638 | T15103 | T15104 | nummod | 5,min |
R10639 | T15104 | T15102 | pobj | min,for |
R10640 | T15105 | T15083 | punct | .,quenched |
R10641 | T15106 | T15107 | det | The,sections |
R10642 | T15107 | T15109 | nsubjpass | sections,blocked |
R10643 | T15108 | T15109 | auxpass | were,blocked |
R10644 | T15109 | T15109 | ROOT | blocked,blocked |
R10645 | T15110 | T15109 | prep | for,blocked |
R10646 | T15111 | T15112 | nummod | 30,min |
R10647 | T15112 | T15110 | pobj | min,for |
R10648 | T15113 | T15112 | prep | with,min |
R10649 | T15114 | T15115 | nummod | 3,% |
R10650 | T15115 | T15123 | compound | %,blotted |
R10651 | T15116 | T15118 | amod | normal,serum |
R10652 | T15117 | T15118 | compound | horse,serum |
R10653 | T15118 | T15123 | nsubj | serum,blotted |
R10654 | T15119 | T15118 | acl | diluted,serum |
R10655 | T15120 | T15119 | prep | in,diluted |
R10656 | T15121 | T15120 | pobj | PBS,in |
R10657 | T15122 | T15118 | punct | ",",serum |
R10658 | T15123 | T15109 | advcl | blotted,blocked |
R10659 | T15124 | T15123 | punct | ",",blotted |
R10660 | T15125 | T15123 | cc | and,blotted |
R10661 | T15126 | T15123 | conj | incubated,blotted |
R10662 | T15127 | T15126 | prep | with,incubated |
R10663 | T15128 | T15129 | amod | primary,mouse |
R10664 | T15129 | T15134 | nmod | mouse,antigen |
R10665 | T15130 | T15134 | amod | anti-mouse,antigen |
R10666 | T15131 | T15134 | amod | proliferating,antigen |
R10667 | T15132 | T15134 | compound | cell,antigen |
R10668 | T15133 | T15134 | amod | nuclear,antigen |
R10669 | T15134 | T15127 | pobj | antigen,with |
R10670 | T15135 | T15134 | punct | (,antigen |
R10671 | T15136 | T15134 | appos | PCNA,antigen |
R10672 | T15137 | T15136 | punct | ",",PCNA |
R10673 | T15138 | T15140 | nummod | 1,200 |
R10674 | T15139 | T15140 | nummod | ∶,200 |
R10675 | T15140 | T15141 | npadvmod | 200,dilution |
R10676 | T15141 | T15136 | appos | dilution,PCNA |
R10677 | T15142 | T15136 | punct | ),PCNA |
R10678 | T15143 | T15144 | amod | monoclonal,antibodies |
R10679 | T15144 | T15134 | appos | antibodies,antigen |
R10680 | T15145 | T15126 | prep | in,incubated |
R10681 | T15146 | T15145 | pcomp | blocking,in |
R10682 | T15147 | T15146 | dobj | serum,blocking |
R10683 | T15148 | T15146 | prep | for,blocking |
R10684 | T15149 | T15150 | nummod | 4,h |
R10685 | T15150 | T15148 | pobj | h,for |
R10686 | T15151 | T15150 | prep | at,h |
R10687 | T15152 | T15153 | compound | room,temperature |
R10688 | T15153 | T15151 | pobj | temperature,at |
R10689 | T15154 | T15109 | punct | .,blocked |
R10690 | T15155 | T15160 | advmod | Thereafter,washed |
R10691 | T15156 | T15160 | punct | ",",washed |
R10692 | T15157 | T15158 | det | the,slides |
R10693 | T15158 | T15160 | nsubjpass | slides,washed |
R10694 | T15159 | T15160 | auxpass | were,washed |
R10695 | T15160 | T15160 | ROOT | washed,washed |
R10696 | T15161 | T15162 | nummod | three,times |
R10697 | T15162 | T15160 | npadvmod | times,washed |
R10698 | T15163 | T15160 | prep | for,washed |
R10699 | T15164 | T15165 | nummod | 5,min |
R10700 | T15165 | T15163 | pobj | min,for |
R10701 | T15166 | T15170 | nsubj | each,incubated |
R10702 | T15167 | T15166 | prep | in,each |
R10703 | T15168 | T15167 | pobj | PBS,in |
R10704 | T15169 | T15166 | cc | and,each |
R10705 | T15170 | T15160 | advcl | incubated,washed |
R10706 | T15171 | T15170 | prep | with,incubated |
R10707 | T15172 | T15173 | amod | biotinylated,anti-mouse |
R10708 | T15173 | T15171 | pobj | anti-mouse,with |
R10709 | T15174 | T15173 | cc | and,anti-mouse |
R10710 | T15175 | T15176 | amod | anti-rabbit,antibodies |
R10711 | T15176 | T15173 | conj | antibodies,anti-mouse |
R10712 | T15177 | T15170 | prep | for,incubated |
R10713 | T15178 | T15179 | nummod | 2,h |
R10714 | T15179 | T15177 | pobj | h,for |
R10715 | T15180 | T15160 | punct | .,washed |
R10716 | T15181 | T15182 | det | The,slides |
R10717 | T15182 | T15184 | nsubjpass | slides,washed |
R10718 | T15183 | T15184 | auxpass | were,washed |
R10719 | T15184 | T15203 | ccomp | washed,Laboratories |
R10720 | T15185 | T15184 | prep | in,washed |
R10721 | T15186 | T15185 | pobj | PBS,in |
R10722 | T15187 | T15184 | punct | ",",washed |
R10723 | T15188 | T15184 | advcl | followed,washed |
R10724 | T15189 | T15188 | agent | by,followed |
R10725 | T15190 | T15191 | det | the,addition |
R10726 | T15191 | T15189 | pobj | addition,by |
R10727 | T15192 | T15191 | prep | of,addition |
R10728 | T15193 | T15197 | det | the,complex |
R10729 | T15194 | T15197 | nmod | avidin,complex |
R10730 | T15195 | T15197 | nmod | biotin,complex |
R10731 | T15196 | T15197 | compound | peroxidase,complex |
R10732 | T15197 | T15200 | amod | complex,kit |
R10733 | T15198 | T15200 | punct | (,kit |
R10734 | T15199 | T15200 | compound | ABC,kit |
R10735 | T15200 | T15192 | pobj | kit,of |
R10736 | T15201 | T15203 | punct | ;,Laboratories |
R10737 | T15202 | T15203 | compound | Vector,Laboratories |
R10738 | T15203 | T15203 | ROOT | Laboratories,Laboratories |
R10739 | T15204 | T15203 | punct | ",",Laboratories |
R10740 | T15205 | T15203 | conj | Burlingame,Laboratories |
R10741 | T15206 | T15205 | punct | ",",Burlingame |
R10742 | T15207 | T15205 | conj | CA,Burlingame |
R10743 | T15208 | T15207 | punct | ",",CA |
R10744 | T15209 | T15207 | conj | USA,CA |
R10745 | T15210 | T15205 | punct | ),Burlingame |
R10746 | T15211 | T15203 | punct | .,Laboratories |
R10747 | T15212 | T15213 | det | The,slides |
R10748 | T15213 | T15215 | nsubjpass | slides,washed |
R10749 | T15214 | T15215 | auxpass | were,washed |
R10750 | T15215 | T15215 | ROOT | washed,washed |
R10751 | T15216 | T15215 | cc | and,washed |
R10752 | T15217 | T15219 | det | the,reaction |
R10753 | T15218 | T15219 | amod | peroxidase,reaction |
R10754 | T15219 | T15221 | nsubjpass | reaction,developed |
R10755 | T15220 | T15221 | auxpass | was,developed |
R10756 | T15221 | T15215 | conj | developed,washed |
R10757 | T15222 | T15221 | prep | with,developed |
R10758 | T15223 | T15222 | pobj | diaminobenzidine,with |
R10759 | T15224 | T15225 | punct | (,DAB |
R10760 | T15225 | T15223 | appos | DAB,diaminobenzidine |
R10761 | T15226 | T15225 | punct | ),DAB |
R10762 | T15227 | T15223 | cc | and,diaminobenzidine |
R10763 | T15228 | T15223 | conj | peroxide,diaminobenzidine |
R10764 | T15229 | T15221 | punct | ",",developed |
R10765 | T15230 | T15221 | advcl | followed,developed |
R10766 | T15231 | T15221 | agent | by,developed |
R10767 | T15232 | T15231 | pcomp | counterstaining,by |
R10768 | T15233 | T15232 | prep | with,counterstaining |
R10769 | T15234 | T15233 | pobj | hematoxylin,with |
R10770 | T15235 | T15232 | punct | ",",counterstaining |
R10771 | T15236 | T15232 | conj | mounting,counterstaining |
R10772 | T15237 | T15236 | prep | in,mounting |
R10773 | T15238 | T15237 | pobj | aqua-mount,in |
R10774 | T15239 | T15236 | punct | ",",mounting |
R10775 | T15240 | T15236 | cc | and,mounting |
R10776 | T15241 | T15236 | conj | evaluation,mounting |
R10777 | T15242 | T15241 | prep | under,evaluation |
R10778 | T15243 | T15245 | det | a,microscope |
R10779 | T15244 | T15245 | amod | light,microscope |
R10780 | T15245 | T15242 | pobj | microscope,under |
R10781 | T15246 | T15248 | punct | (,× |
R10782 | T15247 | T15248 | nsubj | magnification,× |
R10783 | T15248 | T15241 | parataxis | ×,evaluation |
R10784 | T15249 | T15248 | npadvmod | 200,× |
R10785 | T15250 | T15248 | punct | ;,× |
R10786 | T15251 | T15248 | conj | Olympus,× |
R10787 | T15252 | T15251 | punct | ",",Olympus |
R10788 | T15253 | T15251 | conj | Tokyo,Olympus |
R10789 | T15254 | T15253 | punct | ",",Tokyo |
R10790 | T15255 | T15253 | conj | Japan,Tokyo |
R10791 | T15256 | T15253 | punct | ),Tokyo |
R10792 | T15257 | T15221 | punct | .,developed |
R10793 | T15258 | T15260 | det | A,control |
R10794 | T15259 | T15260 | amod | negative,control |
R10795 | T15260 | T15262 | nsubjpass | control,included |
R10796 | T15261 | T15262 | auxpass | was,included |
R10797 | T15262 | T15262 | ROOT | included,included |
R10798 | T15263 | T15262 | prep | in,included |
R10799 | T15264 | T15265 | det | all,experiments |
R10800 | T15265 | T15263 | pobj | experiments,in |
R10801 | T15266 | T15262 | prep | by,included |
R10802 | T15267 | T15266 | pcomp | omitting,by |
R10803 | T15268 | T15270 | det | the,antibody |
R10804 | T15269 | T15270 | amod | primary,antibody |
R10805 | T15270 | T15267 | dobj | antibody,omitting |
R10806 | T15271 | T15262 | punct | .,included |
R10807 | T15272 | T15288 | prep | For,incubated |
R10808 | T15273 | T15274 | det | the,detection |
R10809 | T15274 | T15272 | pobj | detection,For |
R10810 | T15275 | T15274 | prep | of,detection |
R10811 | T15276 | T15278 | amod | apoptotic,death |
R10812 | T15277 | T15278 | compound | cell,death |
R10813 | T15278 | T15275 | pobj | death,of |
R10814 | T15279 | T15274 | prep | in,detection |
R10815 | T15280 | T15282 | det | the,tissues |
R10816 | T15281 | T15282 | compound | tumor,tissues |
R10817 | T15282 | T15279 | pobj | tissues,in |
R10818 | T15283 | T15288 | punct | ",",incubated |
R10819 | T15284 | T15286 | det | the,sections |
R10820 | T15285 | T15286 | amod | paraffin-embedded,sections |
R10821 | T15286 | T15288 | nsubjpass | sections,incubated |
R10822 | T15287 | T15288 | auxpass | were,incubated |
R10823 | T15288 | T15288 | ROOT | incubated,incubated |
R10824 | T15289 | T15288 | prep | in,incubated |
R10825 | T15290 | T15291 | det | a,mixture |
R10826 | T15291 | T15289 | pobj | mixture,in |
R10827 | T15292 | T15291 | prep | of,mixture |
R10828 | T15293 | T15295 | det | the,solution |
R10829 | T15294 | T15295 | amod | labeling,solution |
R10830 | T15295 | T15292 | pobj | solution,of |
R10831 | T15296 | T15295 | punct | (,solution |
R10832 | T15297 | T15298 | nummod | 540,µl |
R10833 | T15298 | T15295 | appos | µl,solution |
R10834 | T15299 | T15295 | punct | ),solution |
R10835 | T15300 | T15288 | cc | and,incubated |
R10836 | T15301 | T15302 | compound | enzyme,solution |
R10837 | T15302 | T15288 | conj | solution,incubated |
R10838 | T15303 | T15305 | punct | (,µl |
R10839 | T15304 | T15305 | nummod | 60,µl |
R10840 | T15305 | T15302 | appos | µl,solution |
R10841 | T15306 | T15302 | punct | ),solution |
R10842 | T15307 | T15302 | prep | for,solution |
R10843 | T15308 | T15309 | nummod | 1,h |
R10844 | T15309 | T15307 | pobj | h,for |
R10845 | T15310 | T15302 | prep | at,solution |
R10846 | T15311 | T15312 | nummod | 37,° |
R10847 | T15312 | T15310 | pobj | °,at |
R10848 | T15313 | T15302 | npadvmod | C,solution |
R10849 | T15314 | T15302 | punct | ",",solution |
R10852 | T15317 | T15288 | conj | washed,incubated |
R10853 | T15318 | T15319 | nummod | three,times |
R10854 | T15319 | T15317 | npadvmod | times,washed |
R10855 | T15320 | T15317 | prep | in,washed |
R10856 | T15321 | T15323 | nummod | 0.1,PBS |
R10857 | T15322 | T15323 | compound | M,PBS |
R10858 | T15323 | T15320 | pobj | PBS,in |
R10859 | T15324 | T15317 | prep | for,washed |
R10860 | T15325 | T15326 | nummod | 5,min |
R10861 | T15326 | T15324 | pobj | min,for |
R10862 | T15327 | T15326 | appos | each,min |
R10863 | T15328 | T15317 | punct | ",",washed |
R10864 | T15329 | T15317 | prep | according,washed |
R10865 | T15330 | T15329 | prep | to,according |
R10866 | T15331 | T15332 | det | the,manufacturer |
R10867 | T15332 | T15333 | poss | manufacturer,instructions |
R10868 | T15333 | T15330 | pobj | instructions,to |
R10869 | T15334 | T15288 | punct | .,incubated |
R10870 | T15335 | T15340 | advmod | Next,incubated |
R10871 | T15336 | T15340 | punct | ",",incubated |
R10872 | T15337 | T15338 | det | the,sections |
R10873 | T15338 | T15340 | nsubjpass | sections,incubated |
R10874 | T15339 | T15340 | auxpass | were,incubated |
R10875 | T15340 | T15340 | ROOT | incubated,incubated |
R10876 | T15341 | T15340 | prep | with,incubated |
R10877 | T15342 | T15343 | nummod | 4,′ |
R10878 | T15343 | T15341 | pobj | ′,with |
R10879 | T15344 | T15346 | punct | ",6",diamidino-2-phenylindole |
R10880 | T15345 | T15346 | punct | -,diamidino-2-phenylindole |
R10881 | T15346 | T15346 | ROOT | diamidino-2-phenylindole,diamidino-2-phenylindole |
R10882 | T15347 | T15348 | punct | (,DAPI |
R10883 | T15348 | T15346 | appos | DAPI,diamidino-2-phenylindole |
R10884 | T15349 | T15346 | punct | ),diamidino-2-phenylindole |
R10885 | T15350 | T15346 | prep | for,diamidino-2-phenylindole |
R10886 | T15351 | T15352 | nummod | 15,min |
R10887 | T15352 | T15350 | pobj | min,for |
R10888 | T15353 | T15346 | prep | at,diamidino-2-phenylindole |
R10889 | T15354 | T15355 | nummod | 37,° |
R10890 | T15355 | T15353 | pobj | °,at |
R10891 | T15356 | T15353 | pobj | C.,at |
R10892 | T15357 | T15362 | advmod | Finally,rinsed |
R10893 | T15358 | T15362 | punct | ",",rinsed |
R10894 | T15359 | T15360 | det | the,sections |
R10895 | T15360 | T15362 | nsubjpass | sections,rinsed |
R10896 | T15361 | T15362 | auxpass | were,rinsed |
R10897 | T15362 | T15362 | ROOT | rinsed,rinsed |
R10898 | T15363 | T15362 | punct | ",",rinsed |
R10899 | T15364 | T15362 | conj | mounted,rinsed |
R10900 | T15365 | T15364 | prep | on,mounted |
R10901 | T15366 | T15365 | pobj | slides,on |
R10902 | T15367 | T15365 | punct | ",",on |
R10903 | T15368 | T15364 | cc | and,mounted |
R10904 | T15369 | T15364 | conj | cover-slipped,mounted |
R10905 | T15370 | T15369 | prep | for,cover-slipped |
R10906 | T15371 | T15372 | compound | fluorescence,microscopy |
R10907 | T15372 | T15370 | pobj | microscopy,for |
R10908 | T15373 | T15375 | punct | (,microscope |
R10909 | T15374 | T15375 | compound | DAS,microscope |
R10910 | T15375 | T15372 | appos | microscope,microscopy |
R10911 | T15376 | T15372 | punct | ),microscopy |
R10912 | T15377 | T15362 | punct | .,rinsed |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15025 | 1043-1053 | Protein | denotes | peroxidase |
T15024 | 926-950 | Protein | denotes | avidin biotin peroxidase |
T15023 | 310-331 | Protein | denotes | Endogenous peroxidase |