> top > docs > PMC:3342329 > spans > 27904-28535 > annotations

PMC:3342329 / 27904-28535 JSONTXT

Annnotations TAB JSON ListView MergeView

2_test

Id Subject Object Predicate Lexical cue
22567084-21423208-91707060 248-250 21423208 denotes 54

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T13926 624-630 NN denotes dermis
T13925 620-623 CC denotes and
T13924 612-619 NN denotes muscles
T13923 600-611 VB denotes surrounding
T13922 596-599 DT denotes the
T13921 591-595 IN denotes from
T13920 581-590 VB denotes separated
T13919 576-580 VB denotes were
T13918 569-575 NN denotes tumors
T13917 565-568 DT denotes The
T13916 553-563 VB denotes sacrificed
T13915 548-552 VB denotes were
T13914 540-547 NN denotes animals
T13913 536-539 DT denotes the
T13912 534-535 -COMMA- denotes ,
T13911 524-534 NN denotes experiment
T13910 520-523 DT denotes the
T13909 517-519 IN denotes of
T13908 513-516 NN denotes end
T13907 509-512 DT denotes the
T13906 506-508 IN denotes At
T13905 494-504 NN denotes dimensions
T13904 490-493 CD denotes two
T13903 486-489 DT denotes the
T13902 483-485 IN denotes of
T13901 475-482 JJ denotes smaller
T13900 471-474 DT denotes the
T13899 468-470 VB denotes is
T13898 466-467 NN denotes B
T13897 462-465 CC denotes and
T13896 455-461 JJ denotes larger
T13895 451-454 DT denotes the
T13894 448-450 VB denotes is
T13893 446-447 NN denotes A
T13892 440-445 WRB denotes where
T13891 438-439 -COMMA- denotes ,
T13890 436-438 CD denotes /2
T13889 435-436 -RRB- denotes )
T13888 431-435 NN denotes A×B2
T13887 430-431 -LRB- denotes (
T13886 428-429 -COLON- denotes :
T13885 421-428 NN denotes formula
T13884 411-420 VB denotes following
T13883 407-410 DT denotes the
T13882 401-406 VB denotes using
T13881 390-400 VB denotes calculated
T13880 386-389 CC denotes and
T13879 377-385 NN denotes calipers
T13878 369-376 JJ denotes Vernier
T13877 364-368 IN denotes with
T13876 355-363 VB denotes measured
T13875 350-354 VB denotes were
T13874 342-349 NN denotes volumes
T13873 336-341 NN denotes tumor
T13872 332-335 DT denotes The
T13871 324-330 RB denotes weekly
T13870 318-323 RB denotes twice
T13869 308-317 VB denotes monitored
T13868 303-307 VB denotes were
T13867 295-302 NN denotes animals
T13866 291-294 DT denotes the
T13865 288-290 IN denotes of
T13864 280-287 NN denotes volumes
T13863 274-279 NN denotes tumor
T13862 270-273 CC denotes and
T13861 262-269 NN denotes weights
T13860 257-261 NN denotes body
T13859 253-256 DT denotes The
T13858 250-251 -RRB- denotes ]
T13857 248-250 CD denotes 54
T13856 247-248 -LRB- denotes [
T13855 237-246 VB denotes described
T13854 226-236 RB denotes previously
T13853 223-225 IN denotes as
T13852 218-222 NN denotes mice
T13851 210-217 NN denotes carrier
T13850 206-209 DT denotes the
T13849 203-205 IN denotes of
T13848 196-202 NN denotes flanks
T13847 184-195 JJ denotes right-lower
T13846 180-183 DT denotes the
T13845 175-179 IN denotes into
T13844 168-174 NN denotes needle
T13843 166-167 NN denotes G
T13842 163-165 CD denotes 27
T13841 161-162 DT denotes a
T13840 155-160 VB denotes using
T13839 153-154 -RRB- denotes ]
T13838 146-153 JJ denotes /animal
T13837 145-146 -RRB- denotes )
T13836 142-145 NN denotes PBS
T13835 141-142 -LRB- denotes (
T13834 135-141 NN denotes saline
T13833 126-134 VB denotes buffered
T13832 116-125 NN denotes Phosphate
T13831 113-115 NN denotes ml
T13830 109-112 CD denotes 0.1
T13829 106-108 IN denotes in
T13828 100-105 NN denotes cells
T13827 94-99 NN denotes tumor
T13826 88-93 CD denotes 5×105
T13825 87-88 -LRB- denotes [
T13824 72-86 RB denotes subcutaneously
T13823 63-71 VB denotes injected
T13822 58-62 VB denotes were
T13821 52-57 NN denotes cells
T13820 43-51 NN denotes melanoma
T13819 39-42 NN denotes B16
T13818 28-38 NN denotes Monitoring
T13817 22-27 NN denotes Tumor
T13816 18-21 CC denotes and
T13815 6-17 NN denotes Inoculation
T13814 0-5 NN denotes Tumor
R9498 T13815 T13814 arg1Of Inoculation,Tumor
R9499 T13815 T13816 arg1Of Inoculation,and
R9500 T13818 T13816 arg2Of Monitoring,and
R9501 T13818 T13817 arg1Of Monitoring,Tumor
R9502 T13821 T13819 arg1Of cells,B16
R9503 T13821 T13820 arg1Of cells,melanoma
R9504 T13821 T13822 arg1Of cells,were
R9505 T13821 T13823 arg2Of cells,injected
R9506 T13823 T13822 arg2Of injected,were
R9507 T13823 T13824 arg1Of injected,subcutaneously
R9508 T13823 T13825 arg1Of injected,[
R9509 T13823 T13840 modOf injected,using
R9510 T13828 T13825 arg2Of cells,[
R9511 T13828 T13826 arg1Of cells,5×105
R9512 T13828 T13827 arg1Of cells,tumor
R9513 T13828 T13829 arg1Of cells,in
R9514 T13830 T13831 arg1Of 0.1,ml
R9515 T13832 T13829 arg2Of Phosphate,in
R9516 T13832 T13830 arg1Of Phosphate,0.1
R9517 T13832 T13833 arg2Of Phosphate,buffered
R9518 T13832 T13838 arg1Of Phosphate,/animal
R9519 T13834 T13833 arg3Of saline,buffered
R9520 T13834 T13835 arg1Of saline,(
R9521 T13836 T13835 arg2Of PBS,(
R9522 T13837 T13835 arg3Of ),(
R9523 T13839 T13825 arg3Of ],[
R9524 T13844 T13840 arg2Of needle,using
R9525 T13844 T13841 arg1Of needle,a
R9526 T13844 T13842 arg1Of needle,27
R9527 T13844 T13843 arg1Of needle,G
R9528 T13844 T13845 arg1Of needle,into
R9529 T13848 T13845 arg2Of flanks,into
R9530 T13848 T13846 arg1Of flanks,the
R9531 T13848 T13847 arg1Of flanks,right-lower
R9532 T13848 T13849 arg1Of flanks,of
R9533 T13848 T13853 arg1Of flanks,as
R9534 T13852 T13849 arg2Of mice,of
R9535 T13852 T13850 arg1Of mice,the
R9536 T13852 T13851 arg1Of mice,carrier
R9537 T13855 T13854 arg1Of described,previously
R9538 T13857 T13853 arg2Of 54,as
R9539 T13857 T13855 arg1Of 54,described
R9540 T13857 T13856 arg2Of 54,[
R9541 T13858 T13856 arg3Of ],[
R9542 T13861 T13860 arg1Of weights,body
R9543 T13861 T13862 arg1Of weights,and
R9544 T13862 T13859 arg1Of and,The
R9545 T13862 T13865 arg1Of and,of
R9546 T13862 T13868 arg1Of and,were
R9547 T13862 T13869 arg2Of and,monitored
R9548 T13864 T13862 arg2Of volumes,and
R9549 T13864 T13863 arg1Of volumes,tumor
R9550 T13867 T13865 arg2Of animals,of
R9551 T13867 T13866 arg1Of animals,the
R9552 T13869 T13868 arg2Of monitored,were
R9553 T13869 T13871 arg1Of monitored,weekly
R9554 T13871 T13870 arg1Of weekly,twice
R9555 T13874 T13872 arg1Of volumes,The
R9556 T13874 T13873 arg1Of volumes,tumor
R9557 T13874 T13875 arg1Of volumes,were
R9558 T13874 T13876 arg2Of volumes,measured
R9559 T13874 T13881 arg2Of volumes,calculated
R9560 T13876 T13875 arg2Of measured,were
R9561 T13876 T13877 arg1Of measured,with
R9562 T13876 T13880 arg1Of measured,and
R9563 T13879 T13877 arg2Of calipers,with
R9564 T13879 T13878 arg1Of calipers,Vernier
R9565 T13881 T13880 arg2Of calculated,and
R9566 T13881 T13882 modOf calculated,using
R9567 T13885 T13882 arg2Of formula,using
R9568 T13885 T13883 arg1Of formula,the
R9569 T13885 T13884 arg1Of formula,following
R9570 T13885 T13886 arg1Of formula,:
R9571 T13888 T13887 arg2Of A×B2,(
R9572 T13889 T13887 arg3Of ),(
R9573 T13890 T13886 arg2Of /2,:
R9574 T13890 T13887 arg1Of /2,(
R9575 T13890 T13891 arg1Of /2,","
R9576 T13890 T13892 arg1Of /2,where
R9577 T13893 T13894 arg1Of A,is
R9578 T13893 T13896 arg1Of A,larger
R9579 T13894 T13897 arg1Of is,and
R9580 T13896 T13894 arg2Of larger,is
R9581 T13896 T13895 arg1Of larger,the
R9582 T13897 T13892 arg2Of and,where
R9583 T13898 T13899 arg1Of B,is
R9584 T13899 T13897 arg2Of is,and
R9585 T13901 T13899 arg2Of smaller,is
R9586 T13901 T13900 arg1Of smaller,the
R9587 T13901 T13902 arg1Of smaller,of
R9588 T13905 T13902 arg2Of dimensions,of
R9589 T13905 T13903 arg1Of dimensions,the
R9590 T13905 T13904 arg1Of dimensions,two
R9591 T13908 T13906 arg2Of end,At
R9592 T13908 T13907 arg1Of end,the
R9593 T13908 T13909 arg1Of end,of
R9594 T13911 T13909 arg2Of experiment,of
R9595 T13911 T13910 arg1Of experiment,the
R9596 T13914 T13913 arg1Of animals,the
R9597 T13914 T13915 arg1Of animals,were
R9598 T13914 T13916 arg2Of animals,sacrificed
R9599 T13916 T13906 arg1Of sacrificed,At
R9600 T13916 T13912 arg1Of sacrificed,","
R9601 T13916 T13915 arg2Of sacrificed,were
R9602 T13918 T13917 arg1Of tumors,The
R9603 T13918 T13919 arg1Of tumors,were
R9604 T13918 T13920 arg2Of tumors,separated
R9605 T13920 T13919 arg2Of separated,were
R9606 T13920 T13921 arg1Of separated,from
R9607 T13924 T13925 arg1Of muscles,and
R9608 T13925 T13921 arg2Of and,from
R9609 T13925 T13922 arg1Of and,the
R9610 T13925 T13923 arg1Of and,surrounding
R9611 T13926 T13925 arg2Of dermis,and

UBERON-AE

Id Subject Object Predicate Lexical cue
T13805 624-630 http://purl.obolibrary.org/obo/UBERON_0002067 denotes dermis

GO-CC

Id Subject Object Predicate Lexical cue
T13813 100-105 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T13812 52-57 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T13811 565-631 Sentence denotes The tumors were separated from the surrounding muscles and dermis.
T13810 506-564 Sentence denotes At the end of the experiment, the animals were sacrificed.
T13809 332-505 Sentence denotes The tumor volumes were measured with Vernier calipers and calculated using the following formula: (A×B2)/2, where A is the larger and B is the smaller of the two dimensions.
T13808 253-331 Sentence denotes The body weights and tumor volumes of the animals were monitored twice weekly.
T13807 39-252 Sentence denotes B16 melanoma cells were injected subcutaneously [5×105 tumor cells in 0.1 ml Phosphate buffered saline(PBS)/animal] using a 27 G needle into the right-lower flanks of the carrier mice as previously described [54].
T13806 0-38 Sentence denotes Tumor Inoculation and Tumor Monitoring
T211 0-38 Sentence denotes Tumor Inoculation and Tumor Monitoring
T212 39-252 Sentence denotes B16 melanoma cells were injected subcutaneously [5×105 tumor cells in 0.1 ml Phosphate buffered saline(PBS)/animal] using a 27 G needle into the right-lower flanks of the carrier mice as previously described [54].
T213 253-331 Sentence denotes The body weights and tumor volumes of the animals were monitored twice weekly.
T214 332-505 Sentence denotes The tumor volumes were measured with Vernier calipers and calculated using the following formula: (A×B2)/2, where A is the larger and B is the smaller of the two dimensions.
T215 506-564 Sentence denotes At the end of the experiment, the animals were sacrificed.
T216 565-631 Sentence denotes The tumors were separated from the surrounding muscles and dermis.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T14055 109-125 Entity denotes 0.1 ml Phosphate
T14054 203-222 Protein denotes of the carrier mice
T14053 88-105 Entity denotes 5×105 tumor cells
T14052 135-146 Entity denotes saline(PBS)
T14051 39-57 Entity denotes B16 melanoma cells

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T14050 630-631 . denotes .
T14049 624-630 NNS denotes dermis
T14048 620-623 CC denotes and
T14047 612-619 NNS denotes muscles
T14002 411-420 VBG denotes following
T14001 407-410 DT denotes the
T14000 401-406 VBG denotes using
T13999 390-400 VBN denotes calculated
T13998 386-389 CC denotes and
T13997 377-385 NNS denotes calipers
T13996 369-376 NNP denotes Vernier
T13995 364-368 IN denotes with
T13994 355-363 VBN denotes measured
T13993 350-354 VBD denotes were
T13992 342-349 NNS denotes volumes
T13991 336-341 NN denotes tumor
T13990 332-335 DT denotes The
T13989 330-331 . denotes .
T13988 324-330 JJ denotes weekly
T13987 318-323 RB denotes twice
T13986 308-317 VBN denotes monitored
T13985 303-307 VBD denotes were
T13984 295-302 NNS denotes animals
T13983 291-294 DT denotes the
T13982 288-290 IN denotes of
T13981 280-287 NNS denotes volumes
T13980 274-279 NN denotes tumor
T13979 270-273 CC denotes and
T13978 262-269 NNS denotes weights
T13977 257-261 NN denotes body
T13976 253-256 DT denotes The
T13975 251-252 . denotes .
T13974 250-251 NNP denotes ]
T13973 248-250 CD denotes 54
T13972 247-248 NNP denotes [
T13971 237-246 VBN denotes described
T13970 226-236 RB denotes previously
T13969 223-225 IN denotes as
T13968 218-222 NNS denotes mice
T13967 210-217 NN denotes carrier
T13966 206-209 DT denotes the
T13965 203-205 IN denotes of
T13964 196-202 NNS denotes flanks
T13963 184-195 JJ denotes right-lower
T13962 180-183 DT denotes the
T13961 175-179 IN denotes into
T13960 168-174 NN denotes needle
T13959 166-167 NNP denotes G
T13958 163-165 CD denotes 27
T13957 161-162 DT denotes a
T13956 155-160 VBG denotes using
T13955 153-154 NNP denotes ]
T13954 147-153 JJ denotes animal
T13953 146-147 RB denotes /
T13952 145-146 -RRB- denotes )
T13951 142-145 NNP denotes PBS
T13950 141-142 -LRB- denotes (
T13949 135-141 NN denotes saline
T13948 126-134 VBD denotes buffered
T13947 116-125 NNP denotes Phosphate
T13946 113-115 NN denotes ml
T13945 109-112 CD denotes 0.1
T13944 106-108 IN denotes in
T13943 100-105 NNS denotes cells
T13942 94-99 NN denotes tumor
T13941 90-93 CD denotes 105
T13940 89-90 CD denotes ×
T13939 88-89 CD denotes 5
T13938 87-88 JJ denotes [
T13937 72-86 RB denotes subcutaneously
T13936 63-71 VBN denotes injected
T13935 58-62 VBD denotes were
T13934 52-57 NNS denotes cells
T13933 43-51 NN denotes melanoma
T13932 39-42 NNP denotes B16
T13931 28-38 NN denotes Monitoring
T13930 22-27 NNP denotes Tumor
T13929 18-21 CC denotes and
T13928 6-17 NNP denotes Inoculation
T13927 0-5 NNP denotes Tumor
T14046 600-611 VBG denotes surrounding
T14045 596-599 DT denotes the
T14044 591-595 IN denotes from
T14043 581-590 VBN denotes separated
T14042 576-580 VBD denotes were
T14041 569-575 NNS denotes tumors
T14040 565-568 DT denotes The
T14039 563-564 . denotes .
T14038 553-563 VBN denotes sacrificed
T14037 548-552 VBD denotes were
T14036 540-547 NNS denotes animals
T14035 536-539 DT denotes the
T14034 534-535 , denotes ,
T14033 524-534 NN denotes experiment
T14032 520-523 DT denotes the
T14031 517-519 IN denotes of
T14030 513-516 NN denotes end
T14029 509-512 DT denotes the
T14028 506-508 IN denotes At
T14027 504-505 . denotes .
T14026 494-504 NNS denotes dimensions
T14025 490-493 CD denotes two
T14024 486-489 DT denotes the
T14023 483-485 IN denotes of
T14022 475-482 JJR denotes smaller
T14021 471-474 DT denotes the
T14020 468-470 VBZ denotes is
T14019 466-467 NNP denotes B
T14018 462-465 CC denotes and
T14017 455-461 JJR denotes larger
T14016 451-454 DT denotes the
T14015 448-450 VBZ denotes is
T14014 446-447 DT denotes A
T14013 440-445 WRB denotes where
T14012 438-439 , denotes ,
T14011 437-438 CD denotes 2
T14010 436-437 NN denotes /
T14009 435-436 -RRB- denotes )
T14008 433-435 NN denotes B2
T14007 432-433 NN denotes ×
T14006 431-432 DT denotes A
T14005 430-431 -LRB- denotes (
T14004 428-429 : denotes :
T14003 421-428 NN denotes formula
R9612 T13927 T13928 compound Tumor,Inoculation
R9613 T13928 T13934 nmod Inoculation,cells
R9614 T13929 T13928 cc and,Inoculation
R9615 T13930 T13932 compound Tumor,B16
R9616 T13931 T13932 compound Monitoring,B16
R9617 T13932 T13928 conj B16,Inoculation
R9618 T13933 T13934 compound melanoma,cells
R9619 T13934 T13936 nsubjpass cells,injected
R9620 T13935 T13936 auxpass were,injected
R9621 T13936 T13936 ROOT injected,injected
R9622 T13937 T13938 advmod subcutaneously,[
R9623 T13938 T13943 nmod [,cells
R9624 T13939 T13938 nummod 5,[
R9625 T13940 T13943 nummod ×,cells
R9626 T13941 T13943 nummod 105,cells
R9627 T13942 T13943 compound tumor,cells
R9628 T13943 T13936 dobj cells,injected
R9629 T13944 T13936 prep in,injected
R9630 T13945 T13946 nummod 0.1,ml
R9631 T13946 T13947 compound ml,Phosphate
R9632 T13947 T13944 pobj Phosphate,in
R9633 T13948 T13936 advcl buffered,injected
R9634 T13949 T13948 dobj saline,buffered
R9635 T13950 T13951 punct (,PBS
R9636 T13951 T13955 nmod PBS,]
R9637 T13952 T13951 punct ),PBS
R9638 T13953 T13955 advmod /,]
R9639 T13954 T13955 compound animal,]
R9640 T13955 T13948 npadvmod ],buffered
R9641 T13956 T13948 advcl using,buffered
R9642 T13957 T13960 det a,needle
R9643 T13958 T13960 nummod 27,needle
R9644 T13959 T13960 compound G,needle
R9645 T13960 T13956 dobj needle,using
R9646 T13961 T13956 prep into,using
R9647 T13962 T13964 det the,flanks
R9648 T13963 T13964 amod right-lower,flanks
R9649 T13964 T13961 pobj flanks,into
R9650 T13965 T13964 prep of,flanks
R9651 T13966 T13968 det the,mice
R9652 T13967 T13968 compound carrier,mice
R9653 T13968 T13965 pobj mice,of
R9654 T13969 T13971 mark as,described
R9655 T13970 T13971 advmod previously,described
R9656 T13971 T13956 advcl described,using
R9657 T13972 T13974 nmod [,]
R9658 T13973 T13974 nummod 54,]
R9659 T13974 T13971 dobj ],described
R9660 T13975 T13936 punct .,injected
R9661 T13976 T13978 det The,weights
R9662 T13977 T13978 compound body,weights
R9663 T13978 T13986 nsubjpass weights,monitored
R9664 T13979 T13978 cc and,weights
R9665 T13980 T13981 compound tumor,volumes
R9666 T13981 T13978 conj volumes,weights
R9667 T13982 T13978 prep of,weights
R9668 T13983 T13984 det the,animals
R9669 T13984 T13982 pobj animals,of
R9670 T13985 T13986 auxpass were,monitored
R9671 T13986 T13986 ROOT monitored,monitored
R9672 T13987 T13988 advmod twice,weekly
R9673 T13988 T13986 advmod weekly,monitored
R9674 T13989 T13986 punct .,monitored
R9675 T13990 T13992 det The,volumes
R9676 T13991 T13992 compound tumor,volumes
R9677 T13992 T13994 nsubjpass volumes,measured
R9678 T13993 T13994 auxpass were,measured
R9679 T13994 T13994 ROOT measured,measured
R9680 T13995 T13994 prep with,measured
R9681 T13996 T13997 compound Vernier,calipers
R9682 T13997 T13995 pobj calipers,with
R9683 T13998 T13997 cc and,calipers
R9684 T13999 T13997 acl calculated,calipers
R9685 T14000 T13999 advcl using,calculated
R9686 T14001 T14003 det the,formula
R9687 T14002 T14003 amod following,formula
R9688 T14003 T14000 dobj formula,using
R9689 T14004 T13997 punct :,calipers
R9690 T14005 T14008 punct (,B2
R9691 T14006 T14008 det A,B2
R9692 T14007 T14008 compound ×,B2
R9693 T14008 T13997 appos B2,calipers
R9694 T14009 T14008 punct ),B2
R9695 T14010 T14020 nsubj /,is
R9696 T14011 T14010 nummod 2,/
R9697 T14012 T14010 punct ",",/
R9698 T14013 T14015 advmod where,is
R9699 T14014 T14015 nsubj A,is
R9700 T14015 T14010 ccomp is,/
R9701 T14016 T14020 det the,is
R9702 T14017 T14020 amod larger,is
R9703 T14018 T14017 cc and,larger
R9704 T14019 T14020 nsubj B,is
R9705 T14020 T13994 advcl is,measured
R9706 T14021 T14022 det the,smaller
R9707 T14022 T14020 attr smaller,is
R9708 T14023 T14022 prep of,smaller
R9709 T14024 T14026 det the,dimensions
R9710 T14025 T14026 nummod two,dimensions
R9711 T14026 T14023 pobj dimensions,of
R9712 T14027 T14020 punct .,is
R9713 T14028 T14038 prep At,sacrificed
R9714 T14029 T14030 det the,end
R9715 T14030 T14028 pobj end,At
R9716 T14031 T14030 prep of,end
R9717 T14032 T14033 det the,experiment
R9718 T14033 T14031 pobj experiment,of
R9719 T14034 T14038 punct ",",sacrificed
R9720 T14035 T14036 det the,animals
R9721 T14036 T14038 nsubjpass animals,sacrificed
R9722 T14037 T14038 auxpass were,sacrificed
R9723 T14038 T14038 ROOT sacrificed,sacrificed
R9724 T14039 T14038 punct .,sacrificed
R9725 T14040 T14041 det The,tumors
R9726 T14041 T14043 nsubjpass tumors,separated
R9727 T14042 T14043 auxpass were,separated
R9728 T14043 T14043 ROOT separated,separated
R9729 T14044 T14043 prep from,separated
R9730 T14045 T14047 det the,muscles
R9731 T14046 T14047 amod surrounding,muscles
R9732 T14047 T14044 pobj muscles,from
R9733 T14048 T14047 cc and,muscles
R9734 T14049 T14047 conj dermis,muscles
R9735 T14050 T14043 punct .,separated